RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 VWA5AO00534 786 aa7.69□□□□□ -1.18
LRCH3-216ENST00000481048 ATP2A1O14983 1001 aa7.69□□□□□ -1.18
LRCH3-216ENST00000481048 CEACAM5P06731 702 aa7.69□□□□□ -1.18
LRCH3-216ENST00000481048 EEF2P13639 858 aaKnown RBP7.69□□□□□ -1.18
LRCH3-216ENST00000481048 OXCT1P55809 520 aa7.69□□□□□ -1.18
LRCH3-216ENST00000481048 KCTD2Q14681 263 aa7.69□□□□□ -1.18
LRCH3-216ENST00000481048 TMEM132BQ14DG7 1078 aa7.69□□□□□ -1.18
LRCH3-216ENST00000481048 SNX17Q15036 470 aa7.69□□□□□ -1.18
LRCH3-216ENST00000481048 PDZD3Q86UT5 571 aa7.69□□□□□ -1.18
LRCH3-216ENST00000481048 SPICE1Q8N0Z3 855 aa7.69□□□□□ -1.18
LRCH3-216ENST00000481048 DEFB123Q8N688 67 aa7.69□□□□□ -1.18
LRCH3-216ENST00000481048 KBTBD3Q8NAB2 608 aa7.69□□□□□ -1.18
LRCH3-216ENST00000481048 PRPF38AQ8NAV1 312 aaKnown RBP7.69□□□□□ -1.18
LRCH3-216ENST00000481048 APPBP2Q92624 585 aa7.69□□□□□ -1.18
LRCH3-216ENST00000481048 MKL1Q969V6 931 aa7.69□□□□□ -1.18
LRCH3-216ENST00000481048 PUS7LQ9H0K6 701 aaKnown RBP7.69□□□□□ -1.18
LRCH3-216ENST00000481048 DCTPP1Q9H773 170 aa7.69□□□□□ -1.18
LRCH3-216ENST00000481048 MTMR10Q9NXD2 777 aa7.69□□□□□ -1.18
LRCH3-216ENST00000481048 PPP4R2Q9NY27 417 aa7.69□□□□□ -1.18
LRCH3-216ENST00000481048 PLAGL2Q9UPG8 496 aa7.69□□□□□ -1.18
LRCH3-216ENST00000481048 STXBP5LQ9Y2K9 1186 aa7.69□□□□□ -1.18
LRCH3-216ENST00000481048 LTBP2Q14767 1821 aa7.68□□□□□ -1.18
LRCH3-216ENST00000481048 DNAH12Q6ZR08 3092 aa7.68□□□□□ -1.18
LRCH3-216ENST00000481048 GSG1L2A8MUP6 293 aa7.68□□□□□ -1.18
LRCH3-216ENST00000481048 PATL2C9JE40 543 aaKnown RBP7.68□□□□□ -1.18
LRCH3-216ENST00000481048 RARBP10826 455 aa7.68□□□□□ -1.18
LRCH3-216ENST00000481048 RTP1P59025 263 aa7.68□□□□□ -1.18
LRCH3-216ENST00000481048 LRRC41Q15345 812 aa7.68□□□□□ -1.18
LRCH3-216ENST00000481048 GJC2Q5T442 439 aaPredicted RBP7.68□□□□□ -1.18
LRCH3-216ENST00000481048 RNF180Q86T96 592 aa7.68□□□□□ -1.18
LRCH3-216ENST00000481048 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.68□□□□□ -1.18
LRCH3-216ENST00000481048 ZNF444Q8N0Y2 327 aaPredicted RBP7.68□□□□□ -1.18
LRCH3-216ENST00000481048 TOP6BLQ8N6T0 577 aa7.68□□□□□ -1.18
LRCH3-216ENST00000481048 ISL2Q96A47 359 aa7.68□□□□□ -1.18
LRCH3-216ENST00000481048 MMP19Q99542 508 aa7.68□□□□□ -1.18
LRCH3-216ENST00000481048 TINF2Q9BSI4 451 aa7.68□□□□□ -1.18
LRCH3-216ENST00000481048 ZNF214Q9UL59 606 aaPredicted RBP7.68□□□□□ -1.18
LRCH3-216ENST00000481048 TACC3Q9Y6A5 838 aa7.68□□□□□ -1.18
LRCH3-216ENST00000481048 ROBO3Q96MS0 1386 aa7.68□□□□□ -1.18
LRCH3-216ENST00000481048 CYP2D7A0A087X1C5 515 aa7.67□□□□□ -1.18
LRCH3-216ENST00000481048 DBX1A6NMT0 343 aa7.67□□□□□ -1.18
LRCH3-216ENST00000481048 ERC2O15083 957 aa7.67□□□□□ -1.18
LRCH3-216ENST00000481048 RNF113AO15541 343 aaKnown RBP7.67□□□□□ -1.18
LRCH3-216ENST00000481048 ITIH2P19823 946 aa7.67□□□□□ -1.18
LRCH3-216ENST00000481048 PKN1Q16512 942 aa7.67□□□□□ -1.18
LRCH3-216ENST00000481048 FAM83BQ5T0W9 1011 aa7.67□□□□□ -1.18
LRCH3-216ENST00000481048 MAMDC4Q6UXC1 1216 aa7.67□□□□□ -1.18
LRCH3-216ENST00000481048 SULF2Q8IWU5 870 aa7.67□□□□□ -1.18
LRCH3-216ENST00000481048 REPS2Q8NFH8 660 aa7.67□□□□□ -1.18
LRCH3-216ENST00000481048 STK35Q8TDR2 534 aa7.67□□□□□ -1.18
LRCH3-216ENST00000481048 TMEM40Q8WWA1 233 aa7.67□□□□□ -1.18
LRCH3-216ENST00000481048 OSBP2Q969R2 916 aa7.67□□□□□ -1.18
LRCH3-216ENST00000481048 DMRTB1Q96MA1 342 aa7.67□□□□□ -1.18
LRCH3-216ENST00000481048 TOX2Q96NM4 488 aa7.67□□□□□ -1.18
LRCH3-216ENST00000481048 SLF1Q9BQI6 1058 aa7.67□□□□□ -1.18
LRCH3-216ENST00000481048 TEX13BQ9BXU2 312 aa7.67□□□□□ -1.18
LRCH3-216ENST00000481048 NACAP1Q9BZK3 213 aa7.67□□□□□ -1.18
LRCH3-216ENST00000481048 BCL11AQ9H165 835 aa7.67□□□□□ -1.18
LRCH3-216ENST00000481048 FBXO40Q9UH90 709 aa7.67□□□□□ -1.18
LRCH3-216ENST00000481048 FEM1BQ9UK73 627 aa7.67□□□□□ -1.18
LRCH3-216ENST00000481048 CNPY2Q9Y2B0 182 aa7.67□□□□□ -1.18
LRCH3-216ENST00000481048 GTF3C3Q9Y5Q9 886 aa7.67□□□□□ -1.18
LRCH3-216ENST00000481048 TTC41PQ6P2S7 1318 aa7.67□□□□□ -1.18
LRCH3-216ENST00000481048 MINDY4BA8MYZ0 360 aa7.66□□□□□ -1.18
LRCH3-216ENST00000481048 F5H6K3 240 aa7.66□□□□□ -1.18
LRCH3-216ENST00000481048 SMIM22K7EJ46 135 aa7.66□□□□□ -1.18
LRCH3-216ENST00000481048 GPAA1O43292 621 aa7.66□□□□□ -1.18
LRCH3-216ENST00000481048 SMARCA5O60264 1052 aaPredicted RBP7.66□□□□□ -1.18
LRCH3-216ENST00000481048 ZBED4O75132 1171 aa7.66□□□□□ -1.18
LRCH3-216ENST00000481048 TTLL1O95922 423 aa7.66□□□□□ -1.18
LRCH3-216ENST00000481048 SLC3A2P08195 630 aaKnown RBP7.66□□□□□ -1.18
LRCH3-216ENST00000481048 AKR1A1P14550 325 aa7.66□□□□□ -1.18
LRCH3-216ENST00000481048 ADCYAP1R1P41586 468 aa7.66□□□□□ -1.18
LRCH3-216ENST00000481048 OAZ1P54368 228 aa7.66□□□□□ -1.18
LRCH3-216ENST00000481048 KLRC3Q07444 240 aa7.66□□□□□ -1.18
LRCH3-216ENST00000481048 ZC3H12AQ5D1E8 599 aaKnown RBP7.66□□□□□ -1.18
LRCH3-216ENST00000481048 PRAMEF19Q5SWL8 479 aa7.66□□□□□ -1.18
LRCH3-216ENST00000481048 TICAM2Q86XR7 235 aa7.66□□□□□ -1.18
LRCH3-216ENST00000481048 KSR1Q8IVT5 923 aa7.66□□□□□ -1.18
LRCH3-216ENST00000481048 GMCL1P1Q8NEA9 526 aa7.66□□□□□ -1.18
LRCH3-216ENST00000481048 CHST13Q8NET6 341 aa7.66□□□□□ -1.18
LRCH3-216ENST00000481048 NUP133Q8WUM0 1156 aa7.66□□□□□ -1.18
LRCH3-216ENST00000481048 DDX11Q96FC9 970 aa7.66□□□□□ -1.18
LRCH3-216ENST00000481048 XPNPEP3Q9NQH7 507 aa7.66□□□□□ -1.18
LRCH3-216ENST00000481048 FBXO28Q9NVF7 368 aa7.66□□□□□ -1.18
LRCH3-216ENST00000481048 MTMR4Q9NYA4 1195 aa7.66□□□□□ -1.18
LRCH3-216ENST00000481048 CLIP2Q9UDT6 1046 aa7.66□□□□□ -1.18
LRCH3-216ENST00000481048 FAM184BQ9ULE4 1060 aa7.66□□□□□ -1.18
LRCH3-216ENST00000481048 ATP11BQ9Y2G3 1177 aa7.66□□□□□ -1.18
LRCH3-216ENST00000481048 CTDP1Q9Y5B0 961 aaPredicted RBP7.66□□□□□ -1.18
LRCH3-216ENST00000481048 DNAJC25-GNG10A0A024R161 153 aa7.65□□□□□ -1.18
LRCH3-216ENST00000481048 IGKV6D-41A0A0C4DH26 115 aa7.65□□□□□ -1.18
LRCH3-216ENST00000481048 PLA2G6O60733 806 aa7.65□□□□□ -1.18
LRCH3-216ENST00000481048 DUSP11O75319 330 aaKnown RBP7.65□□□□□ -1.18
LRCH3-216ENST00000481048 NDUFB10O96000 172 aa7.65□□□□□ -1.18
LRCH3-216ENST00000481048 CHGBP05060 677 aa7.65□□□□□ -1.18
LRCH3-216ENST00000481048 APPP05067 770 aa7.65□□□□□ -1.18
LRCH3-216ENST00000481048 PGK2P07205 417 aa7.65□□□□□ -1.18
LRCH3-216ENST00000481048 ZNF865P0CJ78 1059 aaPredicted RBP7.65□□□□□ -1.18
LRCH3-216ENST00000481048 ARNTP27540 789 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms