RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 PPM1NQ8N819 430 aa9.15□□□□□ -0.94
LSM5-210ENST00000480956 RNF217Q8TC41 542 aa9.15□□□□□ -0.94
LSM5-210ENST00000480956 ATP2A3Q93084 1043 aa9.15□□□□□ -0.94
LSM5-210ENST00000480956 CENPTQ96BT3 561 aa9.15□□□□□ -0.94
LSM5-210ENST00000480956 GAS2L1Q99501 681 aaPredicted RBP9.15□□□□□ -0.94
LSM5-210ENST00000480956 TXLNGYQ9BZA5 131 aa9.15□□□□□ -0.94
LSM5-210ENST00000480956 HAUS2Q9NVX0 235 aa9.15□□□□□ -0.94
LSM5-210ENST00000480956 EPS15L1Q9UBC2 864 aa9.15□□□□□ -0.94
LSM5-210ENST00000480956 TBC1D29Q9UFV1 150 aa9.15□□□□□ -0.94
LSM5-210ENST00000480956 VPS28Q9UK41 221 aa9.15□□□□□ -0.94
LSM5-210ENST00000480956 STXBP5LQ9Y2K9 1186 aa9.15□□□□□ -0.94
LSM5-210ENST00000480956 SLC16A1P53985 500 aa9.14□□□□□ -0.95
LSM5-210ENST00000480956 AMPD2Q01433 879 aa9.14□□□□□ -0.95
LSM5-210ENST00000480956 NRG1Q02297 640 aaPredicted RBP9.14□□□□□ -0.95
LSM5-210ENST00000480956 CYP4F3Q08477 520 aa9.14□□□□□ -0.95
LSM5-210ENST00000480956 PDE3AQ14432 1141 aa9.14□□□□□ -0.95
LSM5-210ENST00000480956 KRT74Q7RTS7 529 aa9.14□□□□□ -0.95
LSM5-210ENST00000480956 LYSMD3Q7Z3D4 306 aa9.14□□□□□ -0.95
LSM5-210ENST00000480956 SDCCAG8Q86SQ7 713 aaPredicted RBP9.14□□□□□ -0.95
LSM5-210ENST00000480956 TTC30AQ86WT1 665 aa9.14□□□□□ -0.95
LSM5-210ENST00000480956 MRPL41Q8IXM3 137 aaKnown RBP9.14□□□□□ -0.95
LSM5-210ENST00000480956 RFFLQ8WZ73 363 aa9.14□□□□□ -0.95
LSM5-210ENST00000480956 C7orf26Q96N11 449 aa9.14□□□□□ -0.95
LSM5-210ENST00000480956 JAKMIP1Q96N16 626 aaKnown RBP9.14□□□□□ -0.95
LSM5-210ENST00000480956 COLEC11Q9BWP8 271 aa9.14□□□□□ -0.95
LSM5-210ENST00000480956 BOCQ9BWV1 1114 aa9.14□□□□□ -0.95
LSM5-210ENST00000480956 UNKQ9C0B0 810 aaKnown RBP9.14□□□□□ -0.95
LSM5-210ENST00000480956 QRSL1Q9H0R6 528 aaKnown RBP9.14□□□□□ -0.95
LSM5-210ENST00000480956 GHITMQ9H3K2 345 aa9.14□□□□□ -0.95
LSM5-210ENST00000480956 CHMP4BQ9H444 224 aaKnown RBP9.14□□□□□ -0.95
LSM5-210ENST00000480956 PREBQ9HCU5 417 aa9.14□□□□□ -0.95
LSM5-210ENST00000480956 OBP2BQ9NPH6 170 aa9.14□□□□□ -0.95
LSM5-210ENST00000480956 GPR27Q9NS67 375 aa9.14□□□□□ -0.95
LSM5-210ENST00000480956 XPO7Q9UIA9 1087 aaKnown RBP9.14□□□□□ -0.95
LSM5-210ENST00000480956 RABL2BQ9UNT1 228 aa9.14□□□□□ -0.95
LSM5-210ENST00000480956 ABCC9O60706 1549 aa9.14□□□□□ -0.95
LSM5-210ENST00000480956 LGALS16A8MUM7 142 aa9.14□□□□□ -0.95
LSM5-210ENST00000480956 DAPK3O43293 454 aa9.14□□□□□ -0.95
LSM5-210ENST00000480956 PLA2G6O60733 806 aa9.14□□□□□ -0.95
LSM5-210ENST00000480956 IL18RAPO95256 599 aa9.14□□□□□ -0.95
LSM5-210ENST00000480956 EOMESO95936 686 aa9.14□□□□□ -0.95
LSM5-210ENST00000480956 GSNP06396 782 aa9.14□□□□□ -0.95
LSM5-210ENST00000480956 EIF2AK2P19525 551 aaKnown RBP9.14□□□□□ -0.95
LSM5-210ENST00000480956 ENPP1P22413 925 aa9.14□□□□□ -0.95
LSM5-210ENST00000480956 ACTN2P35609 894 aa9.14□□□□□ -0.95
LSM5-210ENST00000480956 ZNF445P59923 1031 aa9.14□□□□□ -0.95
LSM5-210ENST00000480956 GSTM4Q03013 218 aa9.14□□□□□ -0.95
LSM5-210ENST00000480956 MAPK7Q13164 816 aa9.14□□□□□ -0.95
LSM5-210ENST00000480956 TIGD6Q17RP2 521 aa9.14□□□□□ -0.95
LSM5-210ENST00000480956 ARL13BQ3SXY8 428 aa9.14□□□□□ -0.95
LSM5-210ENST00000480956 LBX2Q6XYB7 198 aa9.14□□□□□ -0.95
LSM5-210ENST00000480956 RAB44Q7Z6P3 723 aaPredicted RBP9.14□□□□□ -0.95
LSM5-210ENST00000480956 TCP11L2Q8N4U5 519 aa9.14□□□□□ -0.95
LSM5-210ENST00000480956 PANK1Q8TE04 598 aa9.14□□□□□ -0.95
LSM5-210ENST00000480956 RIN2Q8WYP3 895 aaPredicted RBP9.14□□□□□ -0.95
LSM5-210ENST00000480956 ELF4Q99607 663 aaPredicted RBP9.14□□□□□ -0.95
LSM5-210ENST00000480956 KRT84Q9NSB2 600 aa9.14□□□□□ -0.95
LSM5-210ENST00000480956 LCHNA4D1U4 455 aa9.13□□□□□ -0.95
LSM5-210ENST00000480956 TTLL8A6PVC2 850 aa9.13□□□□□ -0.95
LSM5-210ENST00000480956 ZBTB42B2RXF5 422 aa9.13□□□□□ -0.95
LSM5-210ENST00000480956 IPO5O00410 1097 aaKnown RBP9.13□□□□□ -0.95
LSM5-210ENST00000480956 SYT5O00445 386 aa9.13□□□□□ -0.95
LSM5-210ENST00000480956 URI1O94763 535 aaPredicted RBP9.13□□□□□ -0.95
LSM5-210ENST00000480956 ECEL1O95672 775 aa9.13□□□□□ -0.95
LSM5-210ENST00000480956 ALOX15P16050 662 aaPredicted RBP9.13□□□□□ -0.95
LSM5-210ENST00000480956 RHOQP17081 205 aa9.13□□□□□ -0.95
LSM5-210ENST00000480956 NOP2P46087 812 aaKnown RBP9.13□□□□□ -0.95
LSM5-210ENST00000480956 SCRN1Q12765 414 aa9.13□□□□□ -0.95
LSM5-210ENST00000480956 SCARB2Q14108 478 aa9.13□□□□□ -0.95
LSM5-210ENST00000480956 DAG1Q14118 895 aa9.13□□□□□ -0.95
LSM5-210ENST00000480956 ASIC2Q16515 512 aa9.13□□□□□ -0.95
LSM5-210ENST00000480956 SLC35G1Q2M3R5 365 aa9.13□□□□□ -0.95
LSM5-210ENST00000480956 EFHC2Q5JST6 749 aa9.13□□□□□ -0.95
LSM5-210ENST00000480956 ANKRD45Q5TZF3 282 aa9.13□□□□□ -0.95
LSM5-210ENST00000480956 TSPYL6Q8N831 410 aa9.13□□□□□ -0.95
LSM5-210ENST00000480956 RNF152Q8N8N0 203 aa9.13□□□□□ -0.95
LSM5-210ENST00000480956 TDRD7Q8NHU6 1098 aaKnown RBP9.13□□□□□ -0.95
LSM5-210ENST00000480956 KLHDC4Q8TBB5 520 aa9.13□□□□□ -0.95
LSM5-210ENST00000480956 DPF3Q92784 378 aa9.13□□□□□ -0.95
LSM5-210ENST00000480956 MUL1Q969V5 352 aa9.13□□□□□ -0.95
LSM5-210ENST00000480956 ZNF566Q969W8 418 aa9.13□□□□□ -0.95
LSM5-210ENST00000480956 STK33Q9BYT3 514 aa9.13□□□□□ -0.95
LSM5-210ENST00000480956 GRPEL1Q9HAV7 217 aa9.13□□□□□ -0.95
LSM5-210ENST00000480956 SENP2Q9HC62 589 aa9.13□□□□□ -0.95
LSM5-210ENST00000480956 KIF17Q9P2E2 1029 aa9.13□□□□□ -0.95
LSM5-210ENST00000480956 NPFFR2Q9Y5X5 522 aa9.13□□□□□ -0.95
LSM5-210ENST00000480956 FHOD1Q9Y613 1164 aa9.13□□□□□ -0.95
LSM5-210ENST00000480956 DCDC2BA2VCK2 349 aa9.12□□□□□ -0.95
LSM5-210ENST00000480956 SOX1O00570 391 aaPredicted RBP9.12□□□□□ -0.95
LSM5-210ENST00000480956 TRIM38O00635 465 aa9.12□□□□□ -0.95
LSM5-210ENST00000480956 NPC1O15118 1278 aa9.12□□□□□ -0.95
LSM5-210ENST00000480956 ATXN7O15265 892 aaPredicted RBP9.12□□□□□ -0.95
LSM5-210ENST00000480956 ZNF862O60290 1169 aa9.12□□□□□ -0.95
LSM5-210ENST00000480956 HNRNPLP14866 589 aaKnown RBP eCLIP9.12□□□□□ -0.95
LSM5-210ENST00000480956 HPDP32754 393 aaPredicted RBP9.12□□□□□ -0.95
LSM5-210ENST00000480956 SERPINF1P36955 418 aa9.12□□□□□ -0.95
LSM5-210ENST00000480956 CABP4P57796 275 aa9.12□□□□□ -0.95
LSM5-210ENST00000480956 RNASE9P60153 205 aaKnown RBP9.12□□□□□ -0.95
LSM5-210ENST00000480956 CUL4AQ13619 759 aa9.12□□□□□ -0.95
LSM5-210ENST00000480956 SURF1Q15526 300 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms