RNA–Protein interactions for RNA: ENST00000480023.1

C9orf78-205, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,143 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-205ENST00000480023 ZFATQ9P243 1243 aa14.66□□□□□ -0.06
C9orf78-205ENST00000480023 MTRF1LQ9UGC7 380 aaKnown RBP14.66□□□□□ -0.06
C9orf78-205ENST00000480023 SEC63Q9UGP8 760 aaKnown RBP14.66□□□□□ -0.06
C9orf78-205ENST00000480023 TRAF3IP3Q9Y228 551 aa14.66□□□□□ -0.06
C9orf78-205ENST00000480023 PCDHA3Q9Y5H8 950 aa14.66□□□□□ -0.06
C9orf78-205ENST00000480023 CD2APQ9Y5K6 639 aa14.66□□□□□ -0.06
C9orf78-205ENST00000480023 KDM3AQ9Y4C1 1321 aa14.66□□□□□ -0.06
C9orf78-205ENST00000480023 WTIPA6NIX2 430 aaPredicted RBP14.66□□□□□ -0.06
C9orf78-205ENST00000480023 A8MUI8 341 aa14.66□□□□□ -0.06
C9orf78-205ENST00000480023 E7ENQ6 273 aa14.66□□□□□ -0.06
C9orf78-205ENST00000480023 TULP1O00294 542 aaPredicted RBP14.66□□□□□ -0.06
C9orf78-205ENST00000480023 PODXLO00592 558 aa14.66□□□□□ -0.06
C9orf78-205ENST00000480023 RASGRF2O14827 1237 aa14.66□□□□□ -0.06
C9orf78-205ENST00000480023 RARGP13631 454 aa14.66□□□□□ -0.06
C9orf78-205ENST00000480023 FERP16591 822 aa14.66□□□□□ -0.06
C9orf78-205ENST00000480023 PEX19P40855 299 aa14.66□□□□□ -0.06
C9orf78-205ENST00000480023 RWDD2BP57060 319 aa14.66□□□□□ -0.06
C9orf78-205ENST00000480023 CCDC15Q0P6D6 951 aa14.66□□□□□ -0.06
C9orf78-205ENST00000480023 EXOC3L1Q86VI1 746 aa14.66□□□□□ -0.06
C9orf78-205ENST00000480023 APLFQ8IW19 511 aaPredicted RBP14.66□□□□□ -0.06
C9orf78-205ENST00000480023 GLG1Q92896 1179 aa14.66□□□□□ -0.06
C9orf78-205ENST00000480023 FGFR1OP2Q9NVK5 253 aa14.66□□□□□ -0.06
C9orf78-205ENST00000480023 BSDC1Q9NW68 430 aaPredicted RBP14.66□□□□□ -0.06
C9orf78-205ENST00000480023 TMEM260Q9NX78 707 aa14.66□□□□□ -0.06
C9orf78-205ENST00000480023 ARMCX3Q9UH62 379 aaPredicted RBP14.66□□□□□ -0.06
C9orf78-205ENST00000480023 PCYOX1Q9UHG3 505 aa14.66□□□□□ -0.06
C9orf78-205ENST00000480023 PPP1R9AQ9ULJ8 1098 aa14.66□□□□□ -0.06
C9orf78-205ENST00000480023 SNX24Q9Y343 169 aa14.66□□□□□ -0.06
C9orf78-205ENST00000480023 SLC26A4O43511 780 aa14.65□□□□□ -0.06
C9orf78-205ENST00000480023 PHF2O75151 1096 aa14.65□□□□□ -0.06
C9orf78-205ENST00000480023 VCAM1P19320 739 aa14.65□□□□□ -0.06
C9orf78-205ENST00000480023 NR2F2P24468 414 aa14.65□□□□□ -0.06
C9orf78-205ENST00000480023 CHRNA3P32297 505 aa14.65□□□□□ -0.06
C9orf78-205ENST00000480023 ZNF568Q3ZCX4 644 aa14.65□□□□□ -0.06
C9orf78-205ENST00000480023 SPATA21Q7Z572 469 aa14.65□□□□□ -0.06
C9orf78-205ENST00000480023 FITM2Q8N6M3 262 aa14.65□□□□□ -0.06
C9orf78-205ENST00000480023 RNF217Q8TC41 542 aa14.65□□□□□ -0.06
C9orf78-205ENST00000480023 DYNLL2Q96FJ2 89 aa14.65□□□□□ -0.06
C9orf78-205ENST00000480023 NAF1Q96HR8 494 aaKnown RBP14.65□□□□□ -0.06
C9orf78-205ENST00000480023 RUNDC3BQ96NL0 473 aa14.65□□□□□ -0.06
C9orf78-205ENST00000480023 MKNK2Q9HBH9 465 aa14.65□□□□□ -0.06
C9orf78-205ENST00000480023 OSGEPQ9NPF4 335 aa14.65□□□□□ -0.06
C9orf78-205ENST00000480023 LRRC42Q9Y546 428 aa14.65□□□□□ -0.06
C9orf78-205ENST00000480023 GTPBP10A4D1E9 387 aaKnown RBP14.65□□□□□ -0.06
C9orf78-205ENST00000480023 SMIM23A6NLE4 172 aa14.65□□□□□ -0.06
C9orf78-205ENST00000480023 TCP11X1B4DZS4 312 aa14.65□□□□□ -0.06
C9orf78-205ENST00000480023 PDE6BP35913 854 aa14.65□□□□□ -0.06
C9orf78-205ENST00000480023 SF3A3Q12874 501 aaKnown RBP eCLIP14.65□□□□□ -0.06
C9orf78-205ENST00000480023 MKRN3Q13064 507 aaKnown RBP14.65□□□□□ -0.06
C9orf78-205ENST00000480023 RBBP5Q15291 538 aaKnown RBP14.65□□□□□ -0.06
C9orf78-205ENST00000480023 RNF43Q68DV7 783 aa14.65□□□□□ -0.06
C9orf78-205ENST00000480023 BARGINQ6ZT62 677 aa14.65□□□□□ -0.06
C9orf78-205ENST00000480023 KIF2BQ8N4N8 673 aa14.65□□□□□ -0.06
C9orf78-205ENST00000480023 LNX1Q8TBB1 728 aaPredicted RBP14.65□□□□□ -0.06
C9orf78-205ENST00000480023 SLC35G2Q8TBE7 412 aa14.65□□□□□ -0.06
C9orf78-205ENST00000480023 U2AF1L4Q8WU68 220 aaKnown RBP14.65□□□□□ -0.06
C9orf78-205ENST00000480023 CPVLQ9H3G5 476 aa14.65□□□□□ -0.06
C9orf78-205ENST00000480023 ETAA1Q9NY74 926 aa14.65□□□□□ -0.06
C9orf78-205ENST00000480023 STX8Q9UNK0 236 aa14.65□□□□□ -0.06
C9orf78-205ENST00000480023 SYNGAP1Q96PV0 1343 aa14.64□□□□□ -0.07
C9orf78-205ENST00000480023 PITPNM2Q9BZ72 1349 aa14.64□□□□□ -0.07
C9orf78-205ENST00000480023 EVI5O60447 810 aa14.64□□□□□ -0.07
C9orf78-205ENST00000480023 SNUPNO95149 360 aaKnown RBP14.64□□□□□ -0.07
C9orf78-205ENST00000480023 ALAS1P13196 640 aa14.64□□□□□ -0.07
C9orf78-205ENST00000480023 PECAM1P16284 738 aaPredicted RBP14.64□□□□□ -0.07
C9orf78-205ENST00000480023 GNAZP19086 355 aa14.64□□□□□ -0.07
C9orf78-205ENST00000480023 LMNB1P20700 586 aa14.64□□□□□ -0.07
C9orf78-205ENST00000480023 PRDX5P30044 214 aa14.64□□□□□ -0.07
C9orf78-205ENST00000480023 CDC25CP30307 473 aa14.64□□□□□ -0.07
C9orf78-205ENST00000480023 RPL21P46778 160 aaKnown RBP14.64□□□□□ -0.07
C9orf78-205ENST00000480023 SPDYE1Q8NFV5 336 aaPredicted RBP14.64□□□□□ -0.07
C9orf78-205ENST00000480023 PARD3BQ8TEW8 1205 aa14.64□□□□□ -0.07
C9orf78-205ENST00000480023 SYT11Q9BT88 431 aa14.64□□□□□ -0.07
C9orf78-205ENST00000480023 MXD3Q9BW11 206 aa14.64□□□□□ -0.07
C9orf78-205ENST00000480023 TRIM7Q9C029 511 aa14.64□□□□□ -0.07
C9orf78-205ENST00000480023 TBC1D7Q9P0N9 293 aa14.64□□□□□ -0.07
C9orf78-205ENST00000480023 AJAP1Q9UKB5 411 aaPredicted RBP14.64□□□□□ -0.07
C9orf78-205ENST00000480023 UNC5CO95185 931 aa14.63□□□□□ -0.07
C9orf78-205ENST00000480023 XRCC5P13010 732 aaKnown RBP14.63□□□□□ -0.07
C9orf78-205ENST00000480023 ACVR2BQ13705 512 aa14.63□□□□□ -0.07
C9orf78-205ENST00000480023 TAF11Q15544 211 aa14.63□□□□□ -0.07
C9orf78-205ENST00000480023 PARP6Q2NL67 630 aa14.63□□□□□ -0.07
C9orf78-205ENST00000480023 HERC4Q5GLZ8 1057 aaPredicted RBP14.63□□□□□ -0.07
C9orf78-205ENST00000480023 UBAP2Q5T6F2 1119 aaKnown RBP14.63□□□□□ -0.07
C9orf78-205ENST00000480023 ZNF444Q8N0Y2 327 aaPredicted RBP14.63□□□□□ -0.07
C9orf78-205ENST00000480023 CKAP2Q8WWK9 683 aa14.63□□□□□ -0.07
C9orf78-205ENST00000480023 RAB3IPQ96QF0 476 aaPredicted RBP14.63□□□□□ -0.07
C9orf78-205ENST00000480023 PIGSQ96S52 555 aa14.63□□□□□ -0.07
C9orf78-205ENST00000480023 RIOX1Q9H6W3 641 aa14.63□□□□□ -0.07
C9orf78-205ENST00000480023 ANKIB1Q9P2G1 1089 aa14.63□□□□□ -0.07
C9orf78-205ENST00000480023 GGT7Q9UJ14 662 aa14.63□□□□□ -0.07
C9orf78-205ENST00000480023 PNMA3Q9UL41 463 aa14.63□□□□□ -0.07
C9orf78-205ENST00000480023 C10orf71Q711Q0 1435 aa14.63□□□□□ -0.07
C9orf78-205ENST00000480023 ENO4A6NNW6 628 aa14.63□□□□□ -0.07
C9orf78-205ENST00000480023 CYP11B2P19099 503 aa14.63□□□□□ -0.07
C9orf78-205ENST00000480023 RASA1P20936 1047 aa14.63□□□□□ -0.07
C9orf78-205ENST00000480023 CTNNA2P26232 953 aa14.63□□□□□ -0.07
C9orf78-205ENST00000480023 COPB2P35606 906 aa14.63□□□□□ -0.07
C9orf78-205ENST00000480023 HADHBP55084 474 aaKnown RBP14.63□□□□□ -0.07
C9orf78-205ENST00000480023 NUGGCQ68CJ6 796 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms