RNA–Protein interactions for RNA: ENST00000479820.1

SEMA6C-206, Transcript of semaphorin 6C, humanhuman

TSL 3

Gene SEMA6C, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-206ENST00000479820 ITGB1P05556 798 aa17.11■□□□□ 0.33
SEMA6C-206ENST00000479820 KRT2P35908 639 aa17.11■□□□□ 0.33
SEMA6C-206ENST00000479820 NEK4P51957 841 aa17.11■□□□□ 0.33
SEMA6C-206ENST00000479820 NR5A1Q13285 461 aa17.11■□□□□ 0.33
SEMA6C-206ENST00000479820 CTC1Q2NKJ3 1217 aa17.11■□□□□ 0.33
SEMA6C-206ENST00000479820 POTEDQ86YR6 584 aa17.11■□□□□ 0.33
SEMA6C-206ENST00000479820 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.11■□□□□ 0.33
SEMA6C-206ENST00000479820 RNF19AQ9NV58 838 aa17.11■□□□□ 0.33
SEMA6C-206ENST00000479820 PCDHB7Q9Y5E2 793 aa17.11■□□□□ 0.33
SEMA6C-206ENST00000479820 CCNT1O60563 726 aaKnown RBP17.1■□□□□ 0.33
SEMA6C-206ENST00000479820 MAFO75444 373 aaPredicted RBP17.1■□□□□ 0.33
SEMA6C-206ENST00000479820 CENPBP07199 599 aaPredicted RBP17.1■□□□□ 0.33
SEMA6C-206ENST00000479820 QARSP47897 775 aaKnown RBP17.1■□□□□ 0.33
SEMA6C-206ENST00000479820 CDC42EP1Q00587 391 aa17.1■□□□□ 0.33
SEMA6C-206ENST00000479820 MTERF2Q49AM1 385 aa17.1■□□□□ 0.33
SEMA6C-206ENST00000479820 PAN2Q504Q3 1202 aaKnown RBP17.1■□□□□ 0.33
SEMA6C-206ENST00000479820 SPPL3Q8TCT6 385 aa17.1■□□□□ 0.33
SEMA6C-206ENST00000479820 WRAP73Q9P2S5 460 aaPredicted RBP17.1■□□□□ 0.33
SEMA6C-206ENST00000479820 PPME1Q9Y570 386 aa17.1■□□□□ 0.33
SEMA6C-206ENST00000479820 NCK2O43639 380 aa17.09■□□□□ 0.33
SEMA6C-206ENST00000479820 JAK2O60674 1132 aa17.09■□□□□ 0.33
SEMA6C-206ENST00000479820 P4HBP07237 508 aaKnown RBP17.09■□□□□ 0.33
SEMA6C-206ENST00000479820 KCNA5P22460 613 aa17.09■□□□□ 0.33
SEMA6C-206ENST00000479820 DNAJB1P25685 340 aa17.09■□□□□ 0.33
SEMA6C-206ENST00000479820 LTBRP36941 435 aa17.09■□□□□ 0.33
SEMA6C-206ENST00000479820 FAM102BQ5T8I3 360 aa17.09■□□□□ 0.33
SEMA6C-206ENST00000479820 ZNF410Q86VK4 478 aa17.09■□□□□ 0.33
SEMA6C-206ENST00000479820 KLHL23Q8NBE8 558 aa17.09■□□□□ 0.33
SEMA6C-206ENST00000479820 BRMS1Q9HCU9 246 aa17.09■□□□□ 0.33
SEMA6C-206ENST00000479820 ALG13Q9NP73 1137 aaKnown RBP17.09■□□□□ 0.33
SEMA6C-206ENST00000479820 DKC1O60832 514 aaKnown RBP eCLIP17.08■□□□□ 0.32
SEMA6C-206ENST00000479820 HYAL1Q12794 435 aa17.08■□□□□ 0.32
SEMA6C-206ENST00000479820 EPHA7Q15375 998 aa17.08■□□□□ 0.32
SEMA6C-206ENST00000479820 PUS10Q3MIT2 529 aaKnown RBP17.08■□□□□ 0.32
SEMA6C-206ENST00000479820 ZNF598Q86UK7 904 aaKnown RBP17.08■□□□□ 0.32
SEMA6C-206ENST00000479820 C4orf19Q8IY42 314 aa17.08■□□□□ 0.32
SEMA6C-206ENST00000479820 SLFN12Q8IYM2 578 aa17.08■□□□□ 0.32
SEMA6C-206ENST00000479820 JPH2Q9BR39 696 aaPredicted RBP17.08■□□□□ 0.32
SEMA6C-206ENST00000479820 TRAIPQ9BWF2 469 aa17.08■□□□□ 0.32
SEMA6C-206ENST00000479820 TMEM117Q9H0C3 514 aa17.08■□□□□ 0.32
SEMA6C-206ENST00000479820 DHX33Q9H6R0 707 aaKnown RBP17.08■□□□□ 0.32
SEMA6C-206ENST00000479820 CWH43Q9H720 699 aa17.08■□□□□ 0.32
SEMA6C-206ENST00000479820 ATP6V0A4Q9HBG4 840 aa17.08■□□□□ 0.32
SEMA6C-206ENST00000479820 CYP26B1Q9NR63 512 aa17.08■□□□□ 0.32
SEMA6C-206ENST00000479820 GRXCR2A6NFK2 248 aa17.07■□□□□ 0.32
SEMA6C-206ENST00000479820 TBKBP1A7MCY6 615 aa17.07■□□□□ 0.32
SEMA6C-206ENST00000479820 HOXA2O43364 376 aa17.07■□□□□ 0.32
SEMA6C-206ENST00000479820 ATF7P17544 494 aaPredicted RBP17.07■□□□□ 0.32
SEMA6C-206ENST00000479820 UBE3AQ05086 875 aa17.07■□□□□ 0.32
SEMA6C-206ENST00000479820 PLA2G4FQ68DD2 849 aa17.07■□□□□ 0.32
SEMA6C-206ENST00000479820 ECHDC2Q86YB7 292 aa17.07■□□□□ 0.32
SEMA6C-206ENST00000479820 NLRP7Q8WX94 980 aa17.07■□□□□ 0.32
SEMA6C-206ENST00000479820 CASD1Q96PB1 797 aa17.07■□□□□ 0.32
SEMA6C-206ENST00000479820 KIF2CQ99661 725 aa17.07■□□□□ 0.32
SEMA6C-206ENST00000479820 SH2D3AQ9BRG2 576 aa17.07■□□□□ 0.32
SEMA6C-206ENST00000479820 LXNQ9BS40 222 aa17.07■□□□□ 0.32
SEMA6C-206ENST00000479820 HCSTQ9UBK5 93 aa17.07■□□□□ 0.32
SEMA6C-206ENST00000479820 TDRD15B5MCY1 1934 aaKnown RBP17.06■□□□□ 0.32
SEMA6C-206ENST00000479820 A0A0U1RQF3 1178 aa17.06■□□□□ 0.32
SEMA6C-206ENST00000479820 DDX11L8A8MPP1 907 aa17.06■□□□□ 0.32
SEMA6C-206ENST00000479820 BTBD18B2RXH4 712 aa17.06■□□□□ 0.32
SEMA6C-206ENST00000479820 WNT7AO00755 349 aa17.06■□□□□ 0.32
SEMA6C-206ENST00000479820 FGFR1P11362 822 aa17.06■□□□□ 0.32
SEMA6C-206ENST00000479820 ZSCAN20P17040 1043 aaPredicted RBP17.06■□□□□ 0.32
SEMA6C-206ENST00000479820 DNM2P50570 870 aa17.06■□□□□ 0.32
SEMA6C-206ENST00000479820 NPEPPSP55786 919 aa17.06■□□□□ 0.32
SEMA6C-206ENST00000479820 CSPP1Q1MSJ5 1256 aa17.06■□□□□ 0.32
SEMA6C-206ENST00000479820 C8orf34Q49A92 452 aa17.06■□□□□ 0.32
SEMA6C-206ENST00000479820 PTCRAQ6ISU1 281 aaPredicted RBP17.06■□□□□ 0.32
SEMA6C-206ENST00000479820 FAM178BQ8IXR5 827 aa17.06■□□□□ 0.32
SEMA6C-206ENST00000479820 DIS3L2Q8IYB7 885 aaKnown RBP17.06■□□□□ 0.32
SEMA6C-206ENST00000479820 COLGALT1Q8NBJ5 622 aa17.06■□□□□ 0.32
SEMA6C-206ENST00000479820 POF1BQ8WVV4 589 aa17.06■□□□□ 0.32
SEMA6C-206ENST00000479820 ZNF668Q96K58 619 aaPredicted RBP17.06■□□□□ 0.32
SEMA6C-206ENST00000479820 GCOM2Q9BZD3 368 aaPredicted RBP17.06■□□□□ 0.32
SEMA6C-206ENST00000479820 CHST12Q9NRB3 414 aa17.06■□□□□ 0.32
SEMA6C-206ENST00000479820 DACT1Q9NYF0 836 aa17.06■□□□□ 0.32
SEMA6C-206ENST00000479820 SUCLA2Q9P2R7 463 aaPredicted RBP17.06■□□□□ 0.32
SEMA6C-206ENST00000479820 A0A087WZ62 844 aa17.05■□□□□ 0.32
SEMA6C-206ENST00000479820 H3BQ06 376 aaPredicted RBP17.05■□□□□ 0.32
SEMA6C-206ENST00000479820 LYPLA2O95372 231 aa17.05■□□□□ 0.32
SEMA6C-206ENST00000479820 EOMESO95936 686 aa17.05■□□□□ 0.32
SEMA6C-206ENST00000479820 IL9P15248 144 aa17.05■□□□□ 0.32
SEMA6C-206ENST00000479820 LAG3P18627 525 aa17.05■□□□□ 0.32
SEMA6C-206ENST00000479820 FGFR4P22455 802 aa17.05■□□□□ 0.32
SEMA6C-206ENST00000479820 IRS1P35568 1242 aa17.05■□□□□ 0.32
SEMA6C-206ENST00000479820 CLLU1OSQ5K130 101 aa17.05■□□□□ 0.32
SEMA6C-206ENST00000479820 LRRC55Q6ZSA7 311 aa17.05■□□□□ 0.32
SEMA6C-206ENST00000479820 EXOC8Q8IYI6 725 aa17.05■□□□□ 0.32
SEMA6C-206ENST00000479820 LRRC43Q8N309 656 aa17.05■□□□□ 0.32
SEMA6C-206ENST00000479820 ZNF579Q8NAF0 562 aaKnown RBP17.05■□□□□ 0.32
SEMA6C-206ENST00000479820 RSPH1Q8WYR4 309 aa17.05■□□□□ 0.32
SEMA6C-206ENST00000479820 SCLT1Q96NL6 688 aa17.05■□□□□ 0.32
SEMA6C-206ENST00000479820 FDXACB1Q9BRP7 624 aaPredicted RBP17.05■□□□□ 0.32
SEMA6C-206ENST00000479820 IFT122Q9HBG6 1241 aa17.05■□□□□ 0.32
SEMA6C-206ENST00000479820 CD320Q9NPF0 282 aa17.05■□□□□ 0.32
SEMA6C-206ENST00000479820 AAASQ9NRG9 546 aa17.05■□□□□ 0.32
SEMA6C-206ENST00000479820 TYW1Q9NV66 732 aaKnown RBP17.05■□□□□ 0.32
SEMA6C-206ENST00000479820 CLDND1Q9NY35 253 aa17.05■□□□□ 0.32
SEMA6C-206ENST00000479820 LIMCH1Q9UPQ0 1083 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms