RNA–Protein interactions for RNA: ENST00000479660.1

CLDN18-203, Transcript of claudin 18, humanhuman

TSL 2

Gene CLDN18, Length 2,039 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-203ENST00000479660 DPP9Q86TI2 863 aa15.84■□□□□ 0.13
CLDN18-203ENST00000479660 DHX37Q8IY37 1157 aaKnown RBP15.84■□□□□ 0.13
CLDN18-203ENST00000479660 C16orf45Q96MC5 204 aaPredicted RBP15.84■□□□□ 0.13
CLDN18-203ENST00000479660 ACCSQ96QU6 501 aa15.84■□□□□ 0.13
CLDN18-203ENST00000479660 C17orf75Q9HAS0 396 aa15.84■□□□□ 0.13
CLDN18-203ENST00000479660 METTL14Q9HCE5 456 aaKnown RBP15.84■□□□□ 0.13
CLDN18-203ENST00000479660 PDGFCQ9NRA1 345 aa15.84■□□□□ 0.13
CLDN18-203ENST00000479660 SIK3Q9Y2K2 1263 aa15.84■□□□□ 0.13
CLDN18-203ENST00000479660 MANSC4A6NHS7 340 aaPredicted RBP15.83■□□□□ 0.12
CLDN18-203ENST00000479660 NPTX2P47972 431 aa15.83■□□□□ 0.12
CLDN18-203ENST00000479660 KCNH2Q12809 1159 aa15.83■□□□□ 0.12
CLDN18-203ENST00000479660 FIGNQ5HY92 759 aa15.83■□□□□ 0.12
CLDN18-203ENST00000479660 RGMBQ6NW40 437 aa15.83■□□□□ 0.12
CLDN18-203ENST00000479660 CCDC155Q8N6L0 562 aa15.83■□□□□ 0.12
CLDN18-203ENST00000479660 OR8K1Q8NGG5 319 aa15.83■□□□□ 0.12
CLDN18-203ENST00000479660 AFAP1L1Q8TED9 768 aa15.83■□□□□ 0.12
CLDN18-203ENST00000479660 SCFD2Q8WU76 684 aa15.83■□□□□ 0.12
CLDN18-203ENST00000479660 IQCDQ96DY2 449 aa15.83■□□□□ 0.12
CLDN18-203ENST00000479660 GPR20Q99678 358 aa15.83■□□□□ 0.12
CLDN18-203ENST00000479660 NIFKQ9BYG3 293 aaKnown RBP15.83■□□□□ 0.12
CLDN18-203ENST00000479660 AZI2Q9H6S1 392 aa15.83■□□□□ 0.12
CLDN18-203ENST00000479660 MMRN2Q9H8L6 949 aa15.83■□□□□ 0.12
CLDN18-203ENST00000479660 XPNPEP1Q9NQW7 623 aa15.83■□□□□ 0.12
CLDN18-203ENST00000479660 NRBP2Q9NSY0 501 aa15.83■□□□□ 0.12
CLDN18-203ENST00000479660 AGPAT5Q9NUQ2 364 aa15.83■□□□□ 0.12
CLDN18-203ENST00000479660 SOWAHDA6NJG2 315 aa15.82■□□□□ 0.12
CLDN18-203ENST00000479660 IGF2BP3O00425 579 aaKnown RBP eCLIP15.82■□□□□ 0.12
CLDN18-203ENST00000479660 XRCC5P13010 732 aaKnown RBP15.82■□□□□ 0.12
CLDN18-203ENST00000479660 MAPK4P31152 587 aa15.82■□□□□ 0.12
CLDN18-203ENST00000479660 PSMC2P35998 433 aaKnown RBP15.82■□□□□ 0.12
CLDN18-203ENST00000479660 POLGP54098 1239 aaPredicted RBP15.82■□□□□ 0.12
CLDN18-203ENST00000479660 TSR1Q2NL82 804 aaKnown RBP15.82■□□□□ 0.12
CLDN18-203ENST00000479660 PLEKHH3Q7Z736 793 aa15.82■□□□□ 0.12
CLDN18-203ENST00000479660 COPS5Q92905 334 aa15.82■□□□□ 0.12
CLDN18-203ENST00000479660 SPATA33Q96N06 139 aa15.82■□□□□ 0.12
CLDN18-203ENST00000479660 NTPCRQ9BSD7 190 aaKnown RBP15.82■□□□□ 0.12
CLDN18-203ENST00000479660 KMT5AQ9NQR1 393 aa15.82■□□□□ 0.12
CLDN18-203ENST00000479660 FAM207AQ9NSI2 230 aaPredicted RBP15.82■□□□□ 0.12
CLDN18-203ENST00000479660 PLXNB2O15031 1838 aa15.82■□□□□ 0.12
CLDN18-203ENST00000479660 CCP110O43303 1012 aa15.82■□□□□ 0.12
CLDN18-203ENST00000479660 FECHP22830 423 aa15.82■□□□□ 0.12
CLDN18-203ENST00000479660 CYP2J2P51589 502 aa15.82■□□□□ 0.12
CLDN18-203ENST00000479660 PPP2R3AQ06190 1150 aa15.82■□□□□ 0.12
CLDN18-203ENST00000479660 GRB14Q14449 540 aa15.82■□□□□ 0.12
CLDN18-203ENST00000479660 ZNF467Q7Z7K2 595 aaPredicted RBP15.82■□□□□ 0.12
CLDN18-203ENST00000479660 TMTC1Q8IUR5 882 aa15.82■□□□□ 0.12
CLDN18-203ENST00000479660 TMEM161BQ8NDZ6 487 aa15.82■□□□□ 0.12
CLDN18-203ENST00000479660 SPIRE2Q8WWL2 714 aa15.82■□□□□ 0.12
CLDN18-203ENST00000479660 BSNDQ8WZ55 320 aa15.82■□□□□ 0.12
CLDN18-203ENST00000479660 GLG1Q92896 1179 aa15.82■□□□□ 0.12
CLDN18-203ENST00000479660 PPP1R13BQ96KQ4 1090 aa15.82■□□□□ 0.12
CLDN18-203ENST00000479660 DNAJC7Q99615 494 aa15.82■□□□□ 0.12
CLDN18-203ENST00000479660 DMAC2Q9NW81 257 aa15.82■□□□□ 0.12
CLDN18-203ENST00000479660 CPA4Q9UI42 421 aa15.82■□□□□ 0.12
CLDN18-203ENST00000479660 FRMD4BQ9Y2L6 1034 aa15.82■□□□□ 0.12
CLDN18-203ENST00000479660 A0A1W2PQJ5 194 aa15.81■□□□□ 0.12
CLDN18-203ENST00000479660 RTP1P59025 263 aa15.81■□□□□ 0.12
CLDN18-203ENST00000479660 ZBED6P86452 979 aa15.81■□□□□ 0.12
CLDN18-203ENST00000479660 KCNMA1Q12791 1236 aa15.81■□□□□ 0.12
CLDN18-203ENST00000479660 MTF1Q14872 753 aa15.81■□□□□ 0.12
CLDN18-203ENST00000479660 EMC2Q15006 297 aa15.81■□□□□ 0.12
CLDN18-203ENST00000479660 TMEM63BQ5T3F8 832 aa15.81■□□□□ 0.12
CLDN18-203ENST00000479660 CYP26C1Q6V0L0 522 aa15.81■□□□□ 0.12
CLDN18-203ENST00000479660 SLC9A9Q8IVB4 645 aa15.81■□□□□ 0.12
CLDN18-203ENST00000479660 FAM186BQ8IYM0 893 aa15.81■□□□□ 0.12
CLDN18-203ENST00000479660 ZNF397Q8NF99 534 aaPredicted RBP15.81■□□□□ 0.12
CLDN18-203ENST00000479660 IFT74Q96LB3 600 aa15.81■□□□□ 0.12
CLDN18-203ENST00000479660 MKNK1Q9BUB5 465 aa15.81■□□□□ 0.12
CLDN18-203ENST00000479660 KIFC3Q9BVG8 833 aa15.81■□□□□ 0.12
CLDN18-203ENST00000479660 DHX33Q9H6R0 707 aaKnown RBP15.81■□□□□ 0.12
CLDN18-203ENST00000479660 DIS3Q9Y2L1 958 aaKnown RBP15.81■□□□□ 0.12
CLDN18-203ENST00000479660 ARID2Q68CP9 1835 aa15.81■□□□□ 0.12
CLDN18-203ENST00000479660 ZSCAN12O43309 604 aa15.8■□□□□ 0.12
CLDN18-203ENST00000479660 TNNT1P13805 278 aa15.8■□□□□ 0.12
CLDN18-203ENST00000479660 MYBPC2Q14324 1141 aa15.8■□□□□ 0.12
CLDN18-203ENST00000479660 TAF1CQ15572 869 aaPredicted RBP15.8■□□□□ 0.12
CLDN18-203ENST00000479660 PTPN14Q15678 1187 aa15.8■□□□□ 0.12
CLDN18-203ENST00000479660 DCAF17Q5H9S7 520 aaPredicted RBP15.8■□□□□ 0.12
CLDN18-203ENST00000479660 TCERG1LQ5VWI1 586 aa15.8■□□□□ 0.12
CLDN18-203ENST00000479660 TAPT1Q6NXT6 567 aa15.8■□□□□ 0.12
CLDN18-203ENST00000479660 RAD9BQ6WBX8 426 aa15.8■□□□□ 0.12
CLDN18-203ENST00000479660 TOGARAM2Q6ZUX3 1019 aa15.8■□□□□ 0.12
CLDN18-203ENST00000479660 SLC7A3Q8WY07 619 aa15.8■□□□□ 0.12
CLDN18-203ENST00000479660 POLR3FQ9H1D9 316 aaPredicted RBP15.8■□□□□ 0.12
CLDN18-203ENST00000479660 VTA1Q9NP79 307 aa15.8■□□□□ 0.12
CLDN18-203ENST00000479660 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.8■□□□□ 0.12
CLDN18-203ENST00000479660 CGNQ9P2M7 1197 aaKnown RBP15.8■□□□□ 0.12
CLDN18-203ENST00000479660 TBX20Q9UMR3 447 aa15.8■□□□□ 0.12
CLDN18-203ENST00000479660 EXOC7Q9UPT5 735 aa15.8■□□□□ 0.12
CLDN18-203ENST00000479660 PLXNA1Q9UIW2 1896 aa15.8■□□□□ 0.12
CLDN18-203ENST00000479660 PASKQ96RG2 1323 aa15.8■□□□□ 0.12
CLDN18-203ENST00000479660 DENND3A2RUS2 1198 aa15.8■□□□□ 0.12
CLDN18-203ENST00000479660 EPHB6O15197 1021 aa15.8■□□□□ 0.12
CLDN18-203ENST00000479660 EXOC3O60645 756 aa15.8■□□□□ 0.12
CLDN18-203ENST00000479660 LGR5O75473 907 aa15.8■□□□□ 0.12
CLDN18-203ENST00000479660 AFPP02771 609 aaKnown RBP15.8■□□□□ 0.12
CLDN18-203ENST00000479660 MAMDC4Q6UXC1 1216 aa15.8■□□□□ 0.12
CLDN18-203ENST00000479660 NEK11Q8NG66 645 aa15.8■□□□□ 0.12
CLDN18-203ENST00000479660 TMEM143Q96AN5 459 aa15.8■□□□□ 0.12
CLDN18-203ENST00000479660 BORCS6Q96GS4 357 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms