RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 TNFRSF25Q93038 417 aa16.88■□□□□ 0.29
PRKN-207ENST00000479615 PABPC5Q96DU9 382 aaKnown RBP16.88■□□□□ 0.29
PRKN-207ENST00000479615 ZSWIM4Q9H7M6 989 aa16.88■□□□□ 0.29
PRKN-207ENST00000479615 CYP26B1Q9NR63 512 aa16.88■□□□□ 0.29
PRKN-207ENST00000479615 PLAGL2Q9UPG8 496 aa16.88■□□□□ 0.29
PRKN-207ENST00000479615 FAM50BQ9Y247 325 aa16.88■□□□□ 0.29
PRKN-207ENST00000479615 MRPL42Q9Y6G3 142 aaKnown RBP16.88■□□□□ 0.29
PRKN-207ENST00000479615 FSD2A1L4K1 749 aa16.87■□□□□ 0.29
PRKN-207ENST00000479615 CARNS1A5YM72 827 aa16.87■□□□□ 0.29
PRKN-207ENST00000479615 MGEA5O60502 916 aa16.87■□□□□ 0.29
PRKN-207ENST00000479615 EOMESO95936 686 aa16.87■□□□□ 0.29
PRKN-207ENST00000479615 SKIP12755 728 aa16.87■□□□□ 0.29
PRKN-207ENST00000479615 SFPQP23246 707 aaKnown RBP eCLIP16.87■□□□□ 0.29
PRKN-207ENST00000479615 RFC5P40937 340 aa16.87■□□□□ 0.29
PRKN-207ENST00000479615 KCNQ1P51787 676 aa16.87■□□□□ 0.29
PRKN-207ENST00000479615 NR5A1Q13285 461 aa16.87■□□□□ 0.29
PRKN-207ENST00000479615 ANO5Q75V66 913 aa16.87■□□□□ 0.29
PRKN-207ENST00000479615 DIS3L2Q8IYB7 885 aaKnown RBP16.87■□□□□ 0.29
PRKN-207ENST00000479615 NEK9Q8TD19 979 aa16.87■□□□□ 0.29
PRKN-207ENST00000479615 CEP89Q96ST8 783 aa16.87■□□□□ 0.29
PRKN-207ENST00000479615 SH2B1Q9NRF2 756 aaPredicted RBP16.87■□□□□ 0.29
PRKN-207ENST00000479615 GJB4Q9NTQ9 266 aa16.87■□□□□ 0.29
PRKN-207ENST00000479615 PCDHA12Q9UN75 941 aa16.87■□□□□ 0.29
PRKN-207ENST00000479615 COL4A4P53420 1690 aaPredicted RBP16.86■□□□□ 0.29
PRKN-207ENST00000479615 A0A0U1RQF3 1178 aa16.86■□□□□ 0.29
PRKN-207ENST00000479615 EML1O00423 815 aa16.86■□□□□ 0.29
PRKN-207ENST00000479615 GRM6O15303 877 aa16.86■□□□□ 0.29
PRKN-207ENST00000479615 ASAP2O43150 1006 aa16.86■□□□□ 0.29
PRKN-207ENST00000479615 SEC24BO95487 1268 aa16.86■□□□□ 0.29
PRKN-207ENST00000479615 HMGN5P82970 282 aaKnown RBP16.86■□□□□ 0.29
PRKN-207ENST00000479615 TCEAL5Q5H9L2 206 aa16.86■□□□□ 0.29
PRKN-207ENST00000479615 PDE12Q6L8Q7 609 aaKnown RBP16.86■□□□□ 0.29
PRKN-207ENST00000479615 ABI1Q8IZP0 508 aa16.86■□□□□ 0.29
PRKN-207ENST00000479615 CEP170P1Q96L14 293 aa16.86■□□□□ 0.29
PRKN-207ENST00000479615 PPP1R16BQ96T49 567 aa16.86■□□□□ 0.29
PRKN-207ENST00000479615 TRAIPQ9BWF2 469 aa16.86■□□□□ 0.29
PRKN-207ENST00000479615 TMEM117Q9H0C3 514 aa16.86■□□□□ 0.29
PRKN-207ENST00000479615 SUCLA2Q9P2R7 463 aaPredicted RBP16.86■□□□□ 0.29
PRKN-207ENST00000479615 RALGAPA2Q2PPJ7 1873 aa16.85■□□□□ 0.29
PRKN-207ENST00000479615 TBKBP1A7MCY6 615 aa16.85■□□□□ 0.29
PRKN-207ENST00000479615 BTBD18B2RXH4 712 aa16.85■□□□□ 0.29
PRKN-207ENST00000479615 LARGE1O95461 756 aa16.85■□□□□ 0.29
PRKN-207ENST00000479615 LAG3P18627 525 aa16.85■□□□□ 0.29
PRKN-207ENST00000479615 KCNA5P22460 613 aa16.85■□□□□ 0.29
PRKN-207ENST00000479615 YWHABP31946 246 aaKnown RBP16.85■□□□□ 0.29
PRKN-207ENST00000479615 ORC2Q13416 577 aaPredicted RBP16.85■□□□□ 0.29
PRKN-207ENST00000479615 PCBP1Q15365 356 aaKnown RBP eCLIP16.85■□□□□ 0.29
PRKN-207ENST00000479615 CALCRLQ16602 461 aa16.85■□□□□ 0.29
PRKN-207ENST00000479615 PAN2Q504Q3 1202 aaKnown RBP16.85■□□□□ 0.29
PRKN-207ENST00000479615 SPOUT1Q5T280 376 aaKnown RBP16.85■□□□□ 0.29
PRKN-207ENST00000479615 POTEDQ86YR6 584 aa16.85■□□□□ 0.29
PRKN-207ENST00000479615 TCP11Q8WWU5 503 aa16.85■□□□□ 0.29
PRKN-207ENST00000479615 LXNQ9BS40 222 aa16.85■□□□□ 0.29
PRKN-207ENST00000479615 NEMFO60524 1076 aa16.84■□□□□ 0.29
PRKN-207ENST00000479615 LYPLA2O95372 231 aa16.84■□□□□ 0.29
PRKN-207ENST00000479615 POLGP54098 1239 aaPredicted RBP16.84■□□□□ 0.29
PRKN-207ENST00000479615 EARS2Q5JPH6 523 aaKnown RBP16.84■□□□□ 0.29
PRKN-207ENST00000479615 FAM102BQ5T8I3 360 aa16.84■□□□□ 0.29
PRKN-207ENST00000479615 NCAPH2Q6IBW4 605 aa16.84■□□□□ 0.29
PRKN-207ENST00000479615 ECHDC2Q86YB7 292 aa16.84■□□□□ 0.29
PRKN-207ENST00000479615 RHPN2Q8IUC4 686 aa16.84■□□□□ 0.29
PRKN-207ENST00000479615 KLHL23Q8NBE8 558 aa16.84■□□□□ 0.29
PRKN-207ENST00000479615 SPPL3Q8TCT6 385 aa16.84■□□□□ 0.29
PRKN-207ENST00000479615 PSPC1Q8WXF1 523 aaKnown RBP16.84■□□□□ 0.29
PRKN-207ENST00000479615 DHX33Q9H6R0 707 aaKnown RBP16.84■□□□□ 0.29
PRKN-207ENST00000479615 PUF60Q9UHX1 559 aaKnown RBP16.84■□□□□ 0.29
PRKN-207ENST00000479615 A0A087WZ62 844 aa16.83■□□□□ 0.28
PRKN-207ENST00000479615 JAK2O60674 1132 aa16.83■□□□□ 0.28
PRKN-207ENST00000479615 ITGB1P05556 798 aa16.83■□□□□ 0.28
PRKN-207ENST00000479615 XRCC6P12956 609 aaKnown RBP eCLIP16.83■□□□□ 0.28
PRKN-207ENST00000479615 SPIRE1Q08AE8 756 aa16.83■□□□□ 0.28
PRKN-207ENST00000479615 CTC1Q2NKJ3 1217 aa16.83■□□□□ 0.28
PRKN-207ENST00000479615 SRGAP1Q7Z6B7 1085 aa16.83■□□□□ 0.28
PRKN-207ENST00000479615 LRRC43Q8N309 656 aa16.83■□□□□ 0.28
PRKN-207ENST00000479615 C8orf76Q96K31 380 aa16.83■□□□□ 0.28
PRKN-207ENST00000479615 FDXACB1Q9BRP7 624 aaPredicted RBP16.83■□□□□ 0.28
PRKN-207ENST00000479615 MRPL9Q9BYD2 267 aaKnown RBP16.83■□□□□ 0.28
PRKN-207ENST00000479615 FOXP1Q9H334 677 aaPredicted RBP16.83■□□□□ 0.28
PRKN-207ENST00000479615 TTC12Q9H892 705 aaPredicted RBP16.83■□□□□ 0.28
PRKN-207ENST00000479615 ALG13Q9NP73 1137 aaKnown RBP16.83■□□□□ 0.28
PRKN-207ENST00000479615 LZTS1Q9Y250 596 aa16.83■□□□□ 0.28
PRKN-207ENST00000479615 EVPLQ92817 2033 aa16.82■□□□□ 0.28
PRKN-207ENST00000479615 RBAK-RBAKDNI3L0D1 243 aa16.82■□□□□ 0.28
PRKN-207ENST00000479615 SLITRK3O94933 977 aa16.82■□□□□ 0.28
PRKN-207ENST00000479615 PPM1AP35813 382 aa16.82■□□□□ 0.28
PRKN-207ENST00000479615 RBM25P49756 843 aaKnown RBP16.82■□□□□ 0.28
PRKN-207ENST00000479615 RAB27AP51159 221 aa16.82■□□□□ 0.28
PRKN-207ENST00000479615 PLCB3Q01970 1234 aa16.82■□□□□ 0.28
PRKN-207ENST00000479615 DRP2Q13474 957 aa16.82■□□□□ 0.28
PRKN-207ENST00000479615 MXD4Q14582 209 aaPredicted RBP16.82■□□□□ 0.28
PRKN-207ENST00000479615 PTCRAQ6ISU1 281 aaPredicted RBP16.82■□□□□ 0.28
PRKN-207ENST00000479615 FAM184AQ8NB25 1140 aa16.82■□□□□ 0.28
PRKN-207ENST00000479615 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.82■□□□□ 0.28
PRKN-207ENST00000479615 POF1BQ8WVV4 589 aa16.82■□□□□ 0.28
PRKN-207ENST00000479615 MTMR9Q96QG7 549 aa16.82■□□□□ 0.28
PRKN-207ENST00000479615 HSD17B14Q9BPX1 270 aa16.82■□□□□ 0.28
PRKN-207ENST00000479615 UPF2Q9HAU5 1272 aaKnown RBP16.82■□□□□ 0.28
PRKN-207ENST00000479615 ANKEF1Q9NU02 776 aa16.82■□□□□ 0.28
PRKN-207ENST00000479615 TYW1Q9NV66 732 aaKnown RBP16.82■□□□□ 0.28
PRKN-207ENST00000479615 COL4A3BPQ9Y5P4 624 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms