RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 RSPH1Q8WYR4 309 aa18.28■□□□□ 0.52
DDX56-210ENST00000479440 TMEM169Q96HH4 297 aa18.28■□□□□ 0.52
DDX56-210ENST00000479440 AKT3Q9Y243 479 aa18.28■□□□□ 0.52
DDX56-210ENST00000479440 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.27■□□□□ 0.52
DDX56-210ENST00000479440 hCG_1984214I3L0E3 225 aa18.27■□□□□ 0.52
DDX56-210ENST00000479440 SGSM2O43147 1006 aa18.27■□□□□ 0.52
DDX56-210ENST00000479440 EOMESO95936 686 aa18.27■□□□□ 0.52
DDX56-210ENST00000479440 GIT2Q14161 759 aa18.27■□□□□ 0.52
DDX56-210ENST00000479440 ZNF713Q8N859 430 aaPredicted RBP18.27■□□□□ 0.52
DDX56-210ENST00000479440 RNF169Q8NCN4 708 aa18.27■□□□□ 0.52
DDX56-210ENST00000479440 ACSF2Q96CM8 615 aaPredicted RBP18.27■□□□□ 0.52
DDX56-210ENST00000479440 RBM8AQ9Y5S9 174 aaKnown RBP18.27■□□□□ 0.52
DDX56-210ENST00000479440 MAGEB2O15479 319 aa18.26■□□□□ 0.51
DDX56-210ENST00000479440 WEE2P0C1S8 567 aa18.26■□□□□ 0.51
DDX56-210ENST00000479440 AOC1P19801 751 aa18.26■□□□□ 0.51
DDX56-210ENST00000479440 TMOD1P28289 359 aa18.26■□□□□ 0.51
DDX56-210ENST00000479440 ALDH7A1P49419 539 aaKnown RBP18.26■□□□□ 0.51
DDX56-210ENST00000479440 METAP2P50579 478 aaKnown RBP eCLIP18.26■□□□□ 0.51
DDX56-210ENST00000479440 CLCN3P51790 818 aa18.26■□□□□ 0.51
DDX56-210ENST00000479440 CLLU1OSQ5K130 101 aa18.26■□□□□ 0.51
DDX56-210ENST00000479440 SWSAP1Q6NVH7 229 aa18.26■□□□□ 0.51
DDX56-210ENST00000479440 MICU3Q86XE3 530 aa18.26■□□□□ 0.51
DDX56-210ENST00000479440 RAB11FIP4Q86YS3 637 aa18.26■□□□□ 0.51
DDX56-210ENST00000479440 FANCBQ8NB91 859 aa18.26■□□□□ 0.51
DDX56-210ENST00000479440 MAP4K1Q92918 833 aa18.26■□□□□ 0.51
DDX56-210ENST00000479440 FAM167AQ96KS9 214 aa18.26■□□□□ 0.51
DDX56-210ENST00000479440 GLT8D2Q9H1C3 349 aa18.26■□□□□ 0.51
DDX56-210ENST00000479440 CYP26B1Q9NR63 512 aa18.26■□□□□ 0.51
DDX56-210ENST00000479440 LIMD1Q9UGP4 676 aa18.26■□□□□ 0.51
DDX56-210ENST00000479440 CNTNAP5Q8WYK1 1306 aa18.25■□□□□ 0.51
DDX56-210ENST00000479440 SPDYE4A6NLX3 237 aa18.25■□□□□ 0.51
DDX56-210ENST00000479440 BCAR1P56945 870 aa18.25■□□□□ 0.51
DDX56-210ENST00000479440 SETQ01105 290 aaPredicted RBP18.25■□□□□ 0.51
DDX56-210ENST00000479440 ZNF746Q6NUN9 644 aaPredicted RBP18.25■□□□□ 0.51
DDX56-210ENST00000479440 SYNE3Q6ZMZ3 975 aa18.25■□□□□ 0.51
DDX56-210ENST00000479440 CCDC149Q6ZUS6 474 aa18.25■□□□□ 0.51
DDX56-210ENST00000479440 CABP7Q86V35 215 aa18.25■□□□□ 0.51
DDX56-210ENST00000479440 PLA2G4DQ86XP0 818 aa18.25■□□□□ 0.51
DDX56-210ENST00000479440 SMAP1Q8IYB5 467 aaPredicted RBP18.25■□□□□ 0.51
DDX56-210ENST00000479440 CCDC105Q8IYK2 499 aa18.25■□□□□ 0.51
DDX56-210ENST00000479440 HELQQ8TDG4 1101 aa18.25■□□□□ 0.51
DDX56-210ENST00000479440 SCLT1Q96NL6 688 aa18.25■□□□□ 0.51
DDX56-210ENST00000479440 RTP3Q9BQQ7 232 aa18.25■□□□□ 0.51
DDX56-210ENST00000479440 ZBP1Q9H171 429 aa18.25■□□□□ 0.51
DDX56-210ENST00000479440 RBM28Q9NW13 759 aaKnown RBP18.25■□□□□ 0.51
DDX56-210ENST00000479440 DACT1Q9NYF0 836 aa18.25■□□□□ 0.51
DDX56-210ENST00000479440 MAFBQ9Y5Q3 323 aaPredicted RBP18.25■□□□□ 0.51
DDX56-210ENST00000479440 A0A0U1RQF3 1178 aa18.24■□□□□ 0.51
DDX56-210ENST00000479440 IPO5O00410 1097 aaKnown RBP18.24■□□□□ 0.51
DDX56-210ENST00000479440 CXCL14O95715 111 aa18.24■□□□□ 0.51
DDX56-210ENST00000479440 ATP4AP20648 1035 aa18.24■□□□□ 0.51
DDX56-210ENST00000479440 EIF4BP23588 611 aaKnown RBP18.24■□□□□ 0.51
DDX56-210ENST00000479440 NLRP11P59045 1033 aaKnown RBP18.24■□□□□ 0.51
DDX56-210ENST00000479440 ANGPT1Q15389 498 aa18.24■□□□□ 0.51
DDX56-210ENST00000479440 PPFIBP1Q86W92 1011 aa18.24■□□□□ 0.51
DDX56-210ENST00000479440 VPS52Q8N1B4 723 aa18.24■□□□□ 0.51
DDX56-210ENST00000479440 C12orf76Q8N812 135 aaPredicted RBP18.24■□□□□ 0.51
DDX56-210ENST00000479440 SFXN1Q9H9B4 322 aa18.24■□□□□ 0.51
DDX56-210ENST00000479440 TBC1D22BQ9NU19 505 aa18.24■□□□□ 0.51
DDX56-210ENST00000479440 FBXL21Q9UKT6 434 aa18.24■□□□□ 0.51
DDX56-210ENST00000479440 DUSP12Q9UNI6 340 aa18.24■□□□□ 0.51
DDX56-210ENST00000479440 DENND4AQ7Z401 1863 aa18.24■□□□□ 0.51
DDX56-210ENST00000479440 PSAPP07602 524 aa18.23■□□□□ 0.51
DDX56-210ENST00000479440 CTSAP10619 480 aa18.23■□□□□ 0.51
DDX56-210ENST00000479440 CLK2P49760 499 aaKnown RBP18.23■□□□□ 0.51
DDX56-210ENST00000479440 POLGP54098 1239 aaPredicted RBP18.23■□□□□ 0.51
DDX56-210ENST00000479440 TDGQ13569 410 aa18.23■□□□□ 0.51
DDX56-210ENST00000479440 TYW1BQ6NUM6 668 aa18.23■□□□□ 0.51
DDX56-210ENST00000479440 OTOP3Q7RTS5 596 aa18.23■□□□□ 0.51
DDX56-210ENST00000479440 ZNF577Q9BSK1 485 aa18.23■□□□□ 0.51
DDX56-210ENST00000479440 ADAMTS10Q9H324 1103 aa18.23■□□□□ 0.51
DDX56-210ENST00000479440 IRAK3Q9Y616 596 aa18.23■□□□□ 0.51
DDX56-210ENST00000479440 SMCO2A6NFE2 343 aa18.22■□□□□ 0.51
DDX56-210ENST00000479440 NT5C1B-RDH14C9J2C7 533 aa18.22■□□□□ 0.51
DDX56-210ENST00000479440 FAM86B1E9PN63 330 aa18.22■□□□□ 0.51
DDX56-210ENST00000479440 DHX15O43143 795 aaKnown RBP18.22■□□□□ 0.51
DDX56-210ENST00000479440 ZC3H11AO75152 810 aaKnown RBP eCLIP18.22■□□□□ 0.51
DDX56-210ENST00000479440 FAM86B2P0C5J1 330 aa18.22■□□□□ 0.51
DDX56-210ENST00000479440 EPCAMP16422 314 aa18.22■□□□□ 0.51
DDX56-210ENST00000479440 EFCAB12Q6NXP0 572 aa18.22■□□□□ 0.51
DDX56-210ENST00000479440 TRMT1LQ7Z2T5 733 aaKnown RBP18.22■□□□□ 0.51
DDX56-210ENST00000479440 ZNF598Q86UK7 904 aaKnown RBP18.22■□□□□ 0.51
DDX56-210ENST00000479440 SGMS1Q86VZ5 419 aa18.22■□□□□ 0.51
DDX56-210ENST00000479440 LINC01465Q8N7H1 131 aa18.22■□□□□ 0.51
DDX56-210ENST00000479440 GABBR1Q9UBS5 961 aa18.22■□□□□ 0.51
DDX56-210ENST00000479440 DARSP14868 501 aaKnown RBP18.21■□□□□ 0.51
DDX56-210ENST00000479440 GPC3P51654 580 aa18.21■□□□□ 0.51
DDX56-210ENST00000479440 TMC5Q6UXY8 1006 aa18.21■□□□□ 0.51
DDX56-210ENST00000479440 DDX53Q86TM3 631 aaKnown RBP18.21■□□□□ 0.51
DDX56-210ENST00000479440 LRRC71Q8N4P6 559 aa18.21■□□□□ 0.51
DDX56-210ENST00000479440 DTWD2Q8NBA8 298 aa18.21■□□□□ 0.51
DDX56-210ENST00000479440 SLC22A17Q8WUG5 538 aa18.21■□□□□ 0.51
DDX56-210ENST00000479440 NLRP7Q8WX94 980 aa18.21■□□□□ 0.51
DDX56-210ENST00000479440 SEMA4AQ9H3S1 761 aa18.21■□□□□ 0.51
DDX56-210ENST00000479440 BARHL2Q9NY43 387 aa18.21■□□□□ 0.51
DDX56-210ENST00000479440 STK39Q9UEW8 545 aa18.21■□□□□ 0.51
DDX56-210ENST00000479440 PCDHA10Q9Y5I2 948 aa18.21■□□□□ 0.51
DDX56-210ENST00000479440 DMDP11532 3685 aa18.2■□□□□ 0.5
DDX56-210ENST00000479440 IGLV3-22A0A075B6J6 115 aa18.2■□□□□ 0.5
DDX56-210ENST00000479440 SKIP12755 728 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms