RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 CCT6AP40227 531 aaKnown RBP17.23■□□□□ 0.35
C9orf3-217ENST00000479161 HTRA4P83105 476 aaPredicted RBP17.23■□□□□ 0.35
C9orf3-217ENST00000479161 DRP2Q13474 957 aa17.23■□□□□ 0.35
C9orf3-217ENST00000479161 BECN1Q14457 450 aa17.23■□□□□ 0.35
C9orf3-217ENST00000479161 IFNLR1Q8IU57 520 aaPredicted RBP17.23■□□□□ 0.35
C9orf3-217ENST00000479161 CRIPAKQ8N1N5 446 aa17.23■□□□□ 0.35
C9orf3-217ENST00000479161 SNX29Q8TEQ0 813 aa17.23■□□□□ 0.35
C9orf3-217ENST00000479161 PIGOQ8TEQ8 1089 aa17.23■□□□□ 0.35
C9orf3-217ENST00000479161 TIFAQ96CG3 184 aa17.23■□□□□ 0.35
C9orf3-217ENST00000479161 MMTAG2Q9BU76 263 aaKnown RBP17.23■□□□□ 0.35
C9orf3-217ENST00000479161 NFKBIZQ9BYH8 718 aa17.23■□□□□ 0.35
C9orf3-217ENST00000479161 GCOM2Q9BZD3 368 aaPredicted RBP17.23■□□□□ 0.35
C9orf3-217ENST00000479161 ATP6V0A4Q9HBG4 840 aa17.23■□□□□ 0.35
C9orf3-217ENST00000479161 XPNPEP1Q9NQW7 623 aa17.23■□□□□ 0.35
C9orf3-217ENST00000479161 NOC2LQ9Y3T9 749 aaKnown RBP17.23■□□□□ 0.35
C9orf3-217ENST00000479161 INSL6Q9Y581 213 aa17.23■□□□□ 0.35
C9orf3-217ENST00000479161 COL4A3BPQ9Y5P4 624 aa17.23■□□□□ 0.35
C9orf3-217ENST00000479161 CHD9Q3L8U1 2897 aa17.22■□□□□ 0.35
C9orf3-217ENST00000479161 ZSCAN22P10073 491 aaPredicted RBP17.22■□□□□ 0.35
C9orf3-217ENST00000479161 ARL2P36404 184 aa17.22■□□□□ 0.35
C9orf3-217ENST00000479161 DEFB103AP81534 67 aa17.22■□□□□ 0.35
C9orf3-217ENST00000479161 SLC39A14Q15043 492 aa17.22■□□□□ 0.35
C9orf3-217ENST00000479161 ZNF697Q5TEC3 545 aa17.22■□□□□ 0.35
C9orf3-217ENST00000479161 POTEGQ6S5H5 508 aa17.22■□□□□ 0.35
C9orf3-217ENST00000479161 SRGAP1Q7Z6B7 1085 aa17.22■□□□□ 0.35
C9orf3-217ENST00000479161 FAM228AQ86W67 206 aa17.22■□□□□ 0.35
C9orf3-217ENST00000479161 PRPF31Q8WWY3 499 aaKnown RBP17.22■□□□□ 0.35
C9orf3-217ENST00000479161 CCDC43Q96MW1 224 aaKnown RBP17.22■□□□□ 0.35
C9orf3-217ENST00000479161 OSMRQ99650 979 aa17.22■□□□□ 0.35
C9orf3-217ENST00000479161 SH2D3AQ9BRG2 576 aa17.22■□□□□ 0.35
C9orf3-217ENST00000479161 TRAIPQ9BWF2 469 aa17.22■□□□□ 0.35
C9orf3-217ENST00000479161 CHST12Q9NRB3 414 aa17.22■□□□□ 0.35
C9orf3-217ENST00000479161 C1orf112Q9NSG2 853 aa17.22■□□□□ 0.35
C9orf3-217ENST00000479161 FOXD4L1Q9NU39 408 aa17.22■□□□□ 0.35
C9orf3-217ENST00000479161 ST3GAL5Q9UNP4 418 aa17.22■□□□□ 0.35
C9orf3-217ENST00000479161 DNM3Q9UQ16 869 aa17.22■□□□□ 0.35
C9orf3-217ENST00000479161 SRPRBQ9Y5M8 271 aaKnown RBP17.22■□□□□ 0.35
C9orf3-217ENST00000479161 VWA3AA6NCI4 1184 aa17.21■□□□□ 0.35
C9orf3-217ENST00000479161 GRXCR1A8MXD5 290 aa17.21■□□□□ 0.35
C9orf3-217ENST00000479161 EYA4O95677 639 aa17.21■□□□□ 0.35
C9orf3-217ENST00000479161 CYP11B2P19099 503 aa17.21■□□□□ 0.35
C9orf3-217ENST00000479161 NASPP49321 788 aaPredicted RBP17.21■□□□□ 0.35
C9orf3-217ENST00000479161 FAM189BP81408 668 aa17.21■□□□□ 0.35
C9orf3-217ENST00000479161 DSC3Q14574 896 aa17.21■□□□□ 0.35
C9orf3-217ENST00000479161 ECM1Q16610 540 aa17.21■□□□□ 0.35
C9orf3-217ENST00000479161 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.21■□□□□ 0.35
C9orf3-217ENST00000479161 RTN4RL1Q86UN2 441 aaPredicted RBP17.21■□□□□ 0.35
C9orf3-217ENST00000479161 RHPN2Q8IUC4 686 aa17.21■□□□□ 0.35
C9orf3-217ENST00000479161 SP7Q8TDD2 431 aaPredicted RBP17.21■□□□□ 0.35
C9orf3-217ENST00000479161 NLRP7Q8WX94 980 aa17.21■□□□□ 0.35
C9orf3-217ENST00000479161 ZNF396Q96N95 335 aaPredicted RBP17.21■□□□□ 0.35
C9orf3-217ENST00000479161 CCSER1Q9C0I3 900 aa17.21■□□□□ 0.35
C9orf3-217ENST00000479161 TMX1Q9H3N1 280 aa17.21■□□□□ 0.35
C9orf3-217ENST00000479161 SEMA6BQ9H3T3 888 aa17.21■□□□□ 0.35
C9orf3-217ENST00000479161 IFT122Q9HBG6 1241 aa17.21■□□□□ 0.35
C9orf3-217ENST00000479161 RGS18Q9NS28 235 aa17.21■□□□□ 0.35
C9orf3-217ENST00000479161 KCND2Q9NZV8 630 aa17.21■□□□□ 0.35
C9orf3-217ENST00000479161 KIAA1024Q9UPX6 916 aa17.21■□□□□ 0.35
C9orf3-217ENST00000479161 GINS2Q9Y248 185 aa17.21■□□□□ 0.35
C9orf3-217ENST00000479161 TLL1O43897 1013 aa17.2■□□□□ 0.34
C9orf3-217ENST00000479161 SFPQP23246 707 aaKnown RBP eCLIP17.2■□□□□ 0.34
C9orf3-217ENST00000479161 LAMTOR4Q0VGL1 99 aa17.2■□□□□ 0.34
C9orf3-217ENST00000479161 TFDP1Q14186 410 aa17.2■□□□□ 0.34
C9orf3-217ENST00000479161 SLC24A5Q71RS6 500 aa17.2■□□□□ 0.34
C9orf3-217ENST00000479161 RSPH1Q8WYR4 309 aa17.2■□□□□ 0.34
C9orf3-217ENST00000479161 TIPINQ9BVW5 301 aa17.2■□□□□ 0.34
C9orf3-217ENST00000479161 ZNF576Q9H609 170 aa17.2■□□□□ 0.34
C9orf3-217ENST00000479161 ELAC1Q9H777 363 aaKnown RBP17.2■□□□□ 0.34
C9orf3-217ENST00000479161 SLC28A3Q9HAS3 691 aa17.2■□□□□ 0.34
C9orf3-217ENST00000479161 DDX19AQ9NUU7 478 aaKnown RBP17.2■□□□□ 0.34
C9orf3-217ENST00000479161 MTMR10Q9NXD2 777 aa17.2■□□□□ 0.34
C9orf3-217ENST00000479161 CLIC4Q9Y696 253 aa17.2■□□□□ 0.34
C9orf3-217ENST00000479161 A0A087WZ62 844 aa17.19■□□□□ 0.34
C9orf3-217ENST00000479161 ARHGEF35A5YM69 484 aa17.19■□□□□ 0.34
C9orf3-217ENST00000479161 YEATS4O95619 227 aa17.19■□□□□ 0.34
C9orf3-217ENST00000479161 F13A1P00488 732 aa17.19■□□□□ 0.34
C9orf3-217ENST00000479161 STAG3L1P0CL83 205 aa17.19■□□□□ 0.34
C9orf3-217ENST00000479161 PBX2P40425 430 aa17.19■□□□□ 0.34
C9orf3-217ENST00000479161 UBA7P41226 1012 aa17.19■□□□□ 0.34
C9orf3-217ENST00000479161 PTENP60484 403 aa17.19■□□□□ 0.34
C9orf3-217ENST00000479161 NFX1Q12986 1120 aaKnown RBP17.19■□□□□ 0.34
C9orf3-217ENST00000479161 PADI6Q6TGC4 694 aa17.19■□□□□ 0.34
C9orf3-217ENST00000479161 NPAS4Q8IUM7 802 aa17.19■□□□□ 0.34
C9orf3-217ENST00000479161 MYOCDQ8IZQ8 938 aa17.19■□□□□ 0.34
C9orf3-217ENST00000479161 DEFB123Q8N688 67 aa17.19■□□□□ 0.34
C9orf3-217ENST00000479161 LINC01599Q8WXQ3 324 aa17.19■□□□□ 0.34
C9orf3-217ENST00000479161 TMEM143Q96AN5 459 aa17.19■□□□□ 0.34
C9orf3-217ENST00000479161 USP28Q96RU2 1077 aa17.19■□□□□ 0.34
C9orf3-217ENST00000479161 FDXACB1Q9BRP7 624 aaPredicted RBP17.19■□□□□ 0.34
C9orf3-217ENST00000479161 ZBED2Q9BTP6 218 aa17.19■□□□□ 0.34
C9orf3-217ENST00000479161 TTYH1Q9H313 450 aaPredicted RBP17.19■□□□□ 0.34
C9orf3-217ENST00000479161 DACT1Q9NYF0 836 aa17.19■□□□□ 0.34
C9orf3-217ENST00000479161 KCNG1Q9UIX4 513 aa17.19■□□□□ 0.34
C9orf3-217ENST00000479161 YBX2Q9Y2T7 364 aaKnown RBP17.19■□□□□ 0.34
C9orf3-217ENST00000479161 CDH23Q9H251 3354 aa17.19■□□□□ 0.34
C9orf3-217ENST00000479161 CHD7Q9P2D1 2997 aa17.18■□□□□ 0.34
C9orf3-217ENST00000479161 C9IYK1 514 aa17.18■□□□□ 0.34
C9orf3-217ENST00000479161 PPP6R2O75170 966 aa17.18■□□□□ 0.34
C9orf3-217ENST00000479161 ZSCAN20P17040 1043 aaPredicted RBP17.18■□□□□ 0.34
C9orf3-217ENST00000479161 PHKA2P46019 1235 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms