RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 JPH2Q9BR39 696 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-215ENST00000478531 MMTAG2Q9BU76 263 aaKnown RBP7.68□□□□□ -1.18
BRCA1-215ENST00000478531 DHX33Q9H6R0 707 aaKnown RBP7.68□□□□□ -1.18
BRCA1-215ENST00000478531 ATP6V0A4Q9HBG4 840 aa7.68□□□□□ -1.18
BRCA1-215ENST00000478531 ANKEF1Q9NU02 776 aa7.68□□□□□ -1.18
BRCA1-215ENST00000478531 STK24Q9Y6E0 443 aa7.68□□□□□ -1.18
BRCA1-215ENST00000478531 SLC4A7Q9Y6M7 1214 aa7.68□□□□□ -1.18
BRCA1-215ENST00000478531 KDM3AQ9Y4C1 1321 aa7.68□□□□□ -1.18
BRCA1-215ENST00000478531 IGKV6-21A0A0C4DH24 114 aa7.68□□□□□ -1.18
BRCA1-215ENST00000478531 GRXCR1A8MXD5 290 aa7.68□□□□□ -1.18
BRCA1-215ENST00000478531 E9PMD0 336 aa7.68□□□□□ -1.18
BRCA1-215ENST00000478531 GPR32O75388 356 aa7.68□□□□□ -1.18
BRCA1-215ENST00000478531 RPS6KA5O75582 802 aa7.68□□□□□ -1.18
BRCA1-215ENST00000478531 DGAT1O75907 488 aa7.68□□□□□ -1.18
BRCA1-215ENST00000478531 BAIAP3O94812 1187 aa7.68□□□□□ -1.18
BRCA1-215ENST00000478531 ATP2A2P16615 1042 aaKnown RBP7.68□□□□□ -1.18
BRCA1-215ENST00000478531 NCLP19338 710 aaKnown RBP7.68□□□□□ -1.18
BRCA1-215ENST00000478531 LONP1P36776 959 aaKnown RBP7.68□□□□□ -1.18
BRCA1-215ENST00000478531 UBA7P41226 1012 aa7.68□□□□□ -1.18
BRCA1-215ENST00000478531 GPC3P51654 580 aa7.68□□□□□ -1.18
BRCA1-215ENST00000478531 WDR5P61964 334 aaKnown RBP7.68□□□□□ -1.18
BRCA1-215ENST00000478531 DEFB103AP81534 67 aa7.68□□□□□ -1.18
BRCA1-215ENST00000478531 NFX1Q12986 1120 aaKnown RBP7.68□□□□□ -1.18
BRCA1-215ENST00000478531 IKBKEQ14164 716 aa7.68□□□□□ -1.18
BRCA1-215ENST00000478531 FAM117BQ6P1L5 589 aa7.68□□□□□ -1.18
BRCA1-215ENST00000478531 TMCO2Q7Z6W1 182 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-215ENST00000478531 CABP7Q86V35 215 aa7.68□□□□□ -1.18
BRCA1-215ENST00000478531 MYOCDQ8IZQ8 938 aa7.68□□□□□ -1.18
BRCA1-215ENST00000478531 PSPC1Q8WXF1 523 aaKnown RBP7.68□□□□□ -1.18
BRCA1-215ENST00000478531 CLIC6Q96NY7 704 aa7.68□□□□□ -1.18
BRCA1-215ENST00000478531 CSRNP2Q9H175 543 aa7.68□□□□□ -1.18
BRCA1-215ENST00000478531 BHMT2Q9H2M3 363 aa7.68□□□□□ -1.18
BRCA1-215ENST00000478531 AGO3Q9H9G7 860 aaKnown RBP7.68□□□□□ -1.18
BRCA1-215ENST00000478531 FBXO2Q9UK22 296 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-215ENST00000478531 PPME1Q9Y570 386 aa7.68□□□□□ -1.18
BRCA1-215ENST00000478531 COL4A3BPQ9Y5P4 624 aa7.68□□□□□ -1.18
BRCA1-215ENST00000478531 A0A087WZ62 844 aa7.67□□□□□ -1.18
BRCA1-215ENST00000478531 CSDE1O75534 798 aaKnown RBP7.67□□□□□ -1.18
BRCA1-215ENST00000478531 BRD1O95696 1058 aa7.67□□□□□ -1.18
BRCA1-215ENST00000478531 SSBP05455 408 aaKnown RBP eCLIP7.67□□□□□ -1.18
BRCA1-215ENST00000478531 SRGAP2CP0DJJ0 459 aa7.67□□□□□ -1.18
BRCA1-215ENST00000478531 FGFR4P22455 802 aa7.67□□□□□ -1.18
BRCA1-215ENST00000478531 NASPP49321 788 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-215ENST00000478531 RABGGTBP53611 331 aa7.67□□□□□ -1.18
BRCA1-215ENST00000478531 CRYBB1P53674 252 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-215ENST00000478531 DNM1Q05193 864 aaKnown RBP7.67□□□□□ -1.18
BRCA1-215ENST00000478531 SLC39A14Q15043 492 aa7.67□□□□□ -1.18
BRCA1-215ENST00000478531 KARSQ15046 597 aaKnown RBP7.67□□□□□ -1.18
BRCA1-215ENST00000478531 LRIT3Q3SXY7 679 aa7.67□□□□□ -1.18
BRCA1-215ENST00000478531 FAM102BQ5T8I3 360 aa7.67□□□□□ -1.18
BRCA1-215ENST00000478531 RASIP1Q5U651 963 aa7.67□□□□□ -1.18
BRCA1-215ENST00000478531 PADI6Q6TGC4 694 aa7.67□□□□□ -1.18
BRCA1-215ENST00000478531 KCNK18Q7Z418 384 aa7.67□□□□□ -1.18
BRCA1-215ENST00000478531 EXOC8Q8IYI6 725 aa7.67□□□□□ -1.18
BRCA1-215ENST00000478531 KRI1Q8N9T8 703 aaKnown RBP7.67□□□□□ -1.18
BRCA1-215ENST00000478531 TCP11Q8WWU5 503 aa7.67□□□□□ -1.18
BRCA1-215ENST00000478531 PRPF31Q8WWY3 499 aaKnown RBP7.67□□□□□ -1.18
BRCA1-215ENST00000478531 APBB2Q92870 758 aa7.67□□□□□ -1.18
BRCA1-215ENST00000478531 CALML4Q96GE6 196 aa7.67□□□□□ -1.18
BRCA1-215ENST00000478531 CHAMP1Q96JM3 812 aa7.67□□□□□ -1.18
BRCA1-215ENST00000478531 AK8Q96MA6 479 aa7.67□□□□□ -1.18
BRCA1-215ENST00000478531 FDXACB1Q9BRP7 624 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-215ENST00000478531 NT5C3AQ9H0P0 336 aa7.67□□□□□ -1.18
BRCA1-215ENST00000478531 POLR3FQ9H1D9 316 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-215ENST00000478531 ADAMTS10Q9H324 1103 aa7.67□□□□□ -1.18
BRCA1-215ENST00000478531 GPRC5CQ9NQ84 441 aa7.67□□□□□ -1.18
BRCA1-215ENST00000478531 XPNPEP1Q9NQW7 623 aa7.67□□□□□ -1.18
BRCA1-215ENST00000478531 DBR1Q9UK59 544 aaKnown RBP7.67□□□□□ -1.18
BRCA1-215ENST00000478531 PADI3Q9ULW8 664 aa7.67□□□□□ -1.18
BRCA1-215ENST00000478531 DNM3Q9UQ16 869 aa7.67□□□□□ -1.18
BRCA1-215ENST00000478531 ZDHHC9Q9Y397 364 aa7.67□□□□□ -1.18
BRCA1-215ENST00000478531 NOC2LQ9Y3T9 749 aaKnown RBP7.67□□□□□ -1.18
BRCA1-215ENST00000478531 TTC3P53804 2025 aa7.67□□□□□ -1.18
BRCA1-215ENST00000478531 SPTBN5Q9NRC6 3674 aaKnown RBP7.66□□□□□ -1.18
BRCA1-215ENST00000478531 ABHD14A-ACY1A0A1B0GW23 586 aa7.66□□□□□ -1.18
BRCA1-215ENST00000478531 SPTLC2O15270 562 aa7.66□□□□□ -1.18
BRCA1-215ENST00000478531 GAS2O43903 313 aaKnown RBP7.66□□□□□ -1.18
BRCA1-215ENST00000478531 MUTP22033 750 aa7.66□□□□□ -1.18
BRCA1-215ENST00000478531 FXR1P51114 621 aaKnown RBP eCLIP7.66□□□□□ -1.18
BRCA1-215ENST00000478531 LAMTOR4Q0VGL1 99 aa7.66□□□□□ -1.18
BRCA1-215ENST00000478531 GRB10Q13322 594 aa7.66□□□□□ -1.18
BRCA1-215ENST00000478531 DHX8Q14562 1220 aaKnown RBP7.66□□□□□ -1.18
BRCA1-215ENST00000478531 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.66□□□□□ -1.18
BRCA1-215ENST00000478531 FAM228AQ86W67 206 aa7.66□□□□□ -1.18
BRCA1-215ENST00000478531 LINC00301Q8NCQ3 95 aa7.66□□□□□ -1.18
BRCA1-215ENST00000478531 SYMPKQ92797 1274 aaKnown RBP7.66□□□□□ -1.18
BRCA1-215ENST00000478531 EPSTI1Q96J88 318 aa7.66□□□□□ -1.18
BRCA1-215ENST00000478531 PNMA5Q96PV4 448 aa7.66□□□□□ -1.18
BRCA1-215ENST00000478531 POLD4Q9HCU8 107 aa7.66□□□□□ -1.18
BRCA1-215ENST00000478531 ST3GAL5Q9UNP4 418 aa7.66□□□□□ -1.18
BRCA1-215ENST00000478531 SSUH2Q9Y2M2 353 aa7.66□□□□□ -1.18
BRCA1-215ENST00000478531 SRPRBQ9Y5M8 271 aaKnown RBP7.66□□□□□ -1.18
BRCA1-215ENST00000478531 NLRC5Q86WI3 1866 aa7.66□□□□□ -1.18
BRCA1-215ENST00000478531 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-215ENST00000478531 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-215ENST00000478531 DENND3A2RUS2 1198 aa7.66□□□□□ -1.18
BRCA1-215ENST00000478531 EFCAB14O75071 495 aa7.66□□□□□ -1.18
BRCA1-215ENST00000478531 UPP2O95045 317 aa7.66□□□□□ -1.18
BRCA1-215ENST00000478531 YEATS4O95619 227 aa7.66□□□□□ -1.18
BRCA1-215ENST00000478531 EYA4O95677 639 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms