RNA–Protein interactions for RNA: ENST00000478230.5

SNX21-210, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 907 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-210ENST00000478230 RTN4RL1Q86UN2 441 aaPredicted RBP16.84■□□□□ 0.29
SNX21-210ENST00000478230 FAM228AQ86W67 206 aa16.84■□□□□ 0.29
SNX21-210ENST00000478230 RHPN2Q8IUC4 686 aa16.84■□□□□ 0.29
SNX21-210ENST00000478230 CMTR2Q8IYT2 770 aaKnown RBP16.84■□□□□ 0.29
SNX21-210ENST00000478230 TMEM40Q8WWA1 233 aa16.84■□□□□ 0.29
SNX21-210ENST00000478230 PPP1R16BQ96T49 567 aa16.84■□□□□ 0.29
SNX21-210ENST00000478230 ELAC1Q9H777 363 aaKnown RBP16.84■□□□□ 0.29
SNX21-210ENST00000478230 CHST12Q9NRB3 414 aa16.84■□□□□ 0.29
SNX21-210ENST00000478230 GTF3C3Q9Y5Q9 886 aa16.84■□□□□ 0.29
SNX21-210ENST00000478230 GBF1Q92538 1859 aa16.84■□□□□ 0.29
SNX21-210ENST00000478230 DGAT1O75907 488 aa16.83■□□□□ 0.28
SNX21-210ENST00000478230 SKIP12755 728 aa16.83■□□□□ 0.28
SNX21-210ENST00000478230 TECP42680 631 aa16.83■□□□□ 0.28
SNX21-210ENST00000478230 NPEPPSP55786 919 aa16.83■□□□□ 0.28
SNX21-210ENST00000478230 MYO9BQ13459 2157 aa16.83■□□□□ 0.28
SNX21-210ENST00000478230 ADGRE1Q14246 886 aa16.83■□□□□ 0.28
SNX21-210ENST00000478230 PLA2G4FQ68DD2 849 aa16.83■□□□□ 0.28
SNX21-210ENST00000478230 ADGRA3Q8IWK6 1321 aa16.83■□□□□ 0.28
SNX21-210ENST00000478230 RSPH1Q8WYR4 309 aa16.83■□□□□ 0.28
SNX21-210ENST00000478230 ZNF689Q96CS4 500 aaPredicted RBP16.83■□□□□ 0.28
SNX21-210ENST00000478230 NACC1Q96RE7 527 aa16.83■□□□□ 0.28
SNX21-210ENST00000478230 MTRQ99707 1265 aa16.83■□□□□ 0.28
SNX21-210ENST00000478230 POLR3CQ9BUI4 534 aaPredicted RBP16.83■□□□□ 0.28
SNX21-210ENST00000478230 TMEM60Q9H2L4 133 aa16.83■□□□□ 0.28
SNX21-210ENST00000478230 ATP6V0A4Q9HBG4 840 aa16.83■□□□□ 0.28
SNX21-210ENST00000478230 WDR81Q562E7 1941 aa16.82■□□□□ 0.28
SNX21-210ENST00000478230 RPA1P27694 616 aa16.82■□□□□ 0.28
SNX21-210ENST00000478230 PRPHP41219 470 aa16.82■□□□□ 0.28
SNX21-210ENST00000478230 FXR2P51116 673 aaKnown RBP eCLIP16.82■□□□□ 0.28
SNX21-210ENST00000478230 FAM189BP81408 668 aa16.82■□□□□ 0.28
SNX21-210ENST00000478230 NCBP1Q09161 790 aaKnown RBP16.82■□□□□ 0.28
SNX21-210ENST00000478230 TFDP1Q14186 410 aa16.82■□□□□ 0.28
SNX21-210ENST00000478230 PCBP1Q15365 356 aaKnown RBP eCLIP16.82■□□□□ 0.28
SNX21-210ENST00000478230 NAALADL2Q58DX5 795 aa16.82■□□□□ 0.28
SNX21-210ENST00000478230 SRGAP1Q7Z6B7 1085 aa16.82■□□□□ 0.28
SNX21-210ENST00000478230 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.82■□□□□ 0.28
SNX21-210ENST00000478230 TMEM192Q8IY95 271 aa16.82■□□□□ 0.28
SNX21-210ENST00000478230 C11orf84Q9BUA3 381 aaPredicted RBP16.82■□□□□ 0.28
SNX21-210ENST00000478230 PLVAPQ9BX97 442 aa16.82■□□□□ 0.28
SNX21-210ENST00000478230 TMX1Q9H3N1 280 aa16.82■□□□□ 0.28
SNX21-210ENST00000478230 TMEM161AQ9NX61 479 aa16.82■□□□□ 0.28
SNX21-210ENST00000478230 COL4A3BPQ9Y5P4 624 aa16.82■□□□□ 0.28
SNX21-210ENST00000478230 TTC3P53804 2025 aa16.81■□□□□ 0.28
SNX21-210ENST00000478230 A0A087WZ62 844 aa16.81■□□□□ 0.28
SNX21-210ENST00000478230 TMEM150BA6NC51 233 aa16.81■□□□□ 0.28
SNX21-210ENST00000478230 C9IYK1 514 aa16.81■□□□□ 0.28
SNX21-210ENST00000478230 CD2BP2O95400 341 aaKnown RBP16.81■□□□□ 0.28
SNX21-210ENST00000478230 EOMESO95936 686 aa16.81■□□□□ 0.28
SNX21-210ENST00000478230 PTGDRQ13258 359 aa16.81■□□□□ 0.28
SNX21-210ENST00000478230 GRB10Q13322 594 aa16.81■□□□□ 0.28
SNX21-210ENST00000478230 CUL4AQ13619 759 aa16.81■□□□□ 0.28
SNX21-210ENST00000478230 EMC2Q15006 297 aa16.81■□□□□ 0.28
SNX21-210ENST00000478230 EPC2Q52LR7 807 aa16.81■□□□□ 0.28
SNX21-210ENST00000478230 PPM1EQ8WY54 764 aa16.81■□□□□ 0.28
SNX21-210ENST00000478230 SH2D3AQ9BRG2 576 aa16.81■□□□□ 0.28
SNX21-210ENST00000478230 FDXACB1Q9BRP7 624 aaPredicted RBP16.81■□□□□ 0.28
SNX21-210ENST00000478230 AAASQ9NRG9 546 aa16.81■□□□□ 0.28
SNX21-210ENST00000478230 WRAP73Q9P2S5 460 aaPredicted RBP16.81■□□□□ 0.28
SNX21-210ENST00000478230 DAXXQ9UER7 740 aaPredicted RBP16.81■□□□□ 0.28
SNX21-210ENST00000478230 LRWD1Q9UFC0 647 aa16.81■□□□□ 0.28
SNX21-210ENST00000478230 DBR1Q9UK59 544 aaKnown RBP16.81■□□□□ 0.28
SNX21-210ENST00000478230 MTUS1Q9ULD2 1270 aa16.81■□□□□ 0.28
SNX21-210ENST00000478230 MTCH2Q9Y6C9 303 aa16.81■□□□□ 0.28
SNX21-210ENST00000478230 COL4A6Q14031 1691 aa16.81■□□□□ 0.28
SNX21-210ENST00000478230 CARNS1A5YM72 827 aa16.8■□□□□ 0.28
SNX21-210ENST00000478230 POTEMA6NI47 508 aa16.8■□□□□ 0.28
SNX21-210ENST00000478230 H3BNC9 293 aa16.8■□□□□ 0.28
SNX21-210ENST00000478230 RFXAPO00287 272 aa16.8■□□□□ 0.28
SNX21-210ENST00000478230 WNT7AO00755 349 aa16.8■□□□□ 0.28
SNX21-210ENST00000478230 ARHGEF15O94989 841 aa16.8■□□□□ 0.28
SNX21-210ENST00000478230 BMP15O95972 392 aa16.8■□□□□ 0.28
SNX21-210ENST00000478230 BMPR1AP36894 532 aa16.8■□□□□ 0.28
SNX21-210ENST00000478230 PHKA2P46019 1235 aa16.8■□□□□ 0.28
SNX21-210ENST00000478230 POU5F1BQ06416 359 aa16.8■□□□□ 0.28
SNX21-210ENST00000478230 DSC3Q14574 896 aa16.8■□□□□ 0.28
SNX21-210ENST00000478230 AAK1Q2M2I8 961 aa16.8■□□□□ 0.28
SNX21-210ENST00000478230 DTHD1Q6ZMT9 781 aa16.8■□□□□ 0.28
SNX21-210ENST00000478230 BRAPQ7Z569 592 aa16.8■□□□□ 0.28
SNX21-210ENST00000478230 ABI1Q8IZP0 508 aa16.8■□□□□ 0.28
SNX21-210ENST00000478230 MICALL1Q8N3F8 863 aa16.8■□□□□ 0.28
SNX21-210ENST00000478230 KCTD17Q8N5Z5 321 aa16.8■□□□□ 0.28
SNX21-210ENST00000478230 MCPH1Q8NEM0 835 aa16.8■□□□□ 0.28
SNX21-210ENST00000478230 PRPF31Q8WWY3 499 aaKnown RBP16.8■□□□□ 0.28
SNX21-210ENST00000478230 LINC01599Q8WXQ3 324 aa16.8■□□□□ 0.28
SNX21-210ENST00000478230 CLP1Q92989 425 aaKnown RBP16.8■□□□□ 0.28
SNX21-210ENST00000478230 INTS4Q96HW7 963 aaKnown RBP16.8■□□□□ 0.28
SNX21-210ENST00000478230 NLRP4Q96MN2 994 aa16.8■□□□□ 0.28
SNX21-210ENST00000478230 C17orf80Q9BSJ5 609 aa16.8■□□□□ 0.28
SNX21-210ENST00000478230 LMAN2LQ9H0V9 348 aa16.8■□□□□ 0.28
SNX21-210ENST00000478230 C5orf67F2Z3F1 127 aa16.79■□□□□ 0.28
SNX21-210ENST00000478230 CTNNB1P35222 781 aa16.79■□□□□ 0.28
SNX21-210ENST00000478230 RARRES1P49788 294 aa16.79■□□□□ 0.28
SNX21-210ENST00000478230 RAB27AP51159 221 aa16.79■□□□□ 0.28
SNX21-210ENST00000478230 LAMTOR4Q0VGL1 99 aa16.79■□□□□ 0.28
SNX21-210ENST00000478230 DRP2Q13474 957 aa16.79■□□□□ 0.28
SNX21-210ENST00000478230 GPM6BQ13491 265 aa16.79■□□□□ 0.28
SNX21-210ENST00000478230 SKIV2LQ15477 1246 aaKnown RBP16.79■□□□□ 0.28
SNX21-210ENST00000478230 CCDC85BQ15834 202 aaPredicted RBP16.79■□□□□ 0.28
SNX21-210ENST00000478230 CSPP1Q1MSJ5 1256 aa16.79■□□□□ 0.28
SNX21-210ENST00000478230 KRT79Q5XKE5 535 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms