RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 ATP8B4Q8TF62 1192 aa14.68□□□□□ -0.06
HLA-DMA-208ENST00000477541 ZNF317Q96PQ6 595 aaPredicted RBP14.68□□□□□ -0.06
HLA-DMA-208ENST00000477541 STK33Q9BYT3 514 aa14.68□□□□□ -0.06
HLA-DMA-208ENST00000477541 PSTPIP2Q9H939 334 aa14.68□□□□□ -0.06
HLA-DMA-208ENST00000477541 CD248Q9HCU0 757 aa14.68□□□□□ -0.06
HLA-DMA-208ENST00000477541 ZDHHC18Q9NUE0 388 aa14.68□□□□□ -0.06
HLA-DMA-208ENST00000477541 DNM3Q9UQ16 869 aa14.68□□□□□ -0.06
HLA-DMA-208ENST00000477541 A0A1B0GUA9 196 aa14.67□□□□□ -0.06
HLA-DMA-208ENST00000477541 DDX3XO00571 662 aaKnown RBP eCLIP14.67□□□□□ -0.06
HLA-DMA-208ENST00000477541 IL1R1P14778 569 aa14.67□□□□□ -0.06
HLA-DMA-208ENST00000477541 RPA1P27694 616 aa14.67□□□□□ -0.06
HLA-DMA-208ENST00000477541 TMOD1P28289 359 aa14.67□□□□□ -0.06
HLA-DMA-208ENST00000477541 CHRNA3P32297 505 aa14.67□□□□□ -0.06
HLA-DMA-208ENST00000477541 SOX5P35711 763 aa14.67□□□□□ -0.06
HLA-DMA-208ENST00000477541 RHBDL3P58872 404 aa14.67□□□□□ -0.06
HLA-DMA-208ENST00000477541 GIT2Q14161 759 aa14.67□□□□□ -0.06
HLA-DMA-208ENST00000477541 RHOT2Q8IXI1 618 aa14.67□□□□□ -0.06
HLA-DMA-208ENST00000477541 GBP7Q8N8V2 638 aaPredicted RBP14.67□□□□□ -0.06
HLA-DMA-208ENST00000477541 CTNNBL1Q8WYA6 563 aaPredicted RBP14.67□□□□□ -0.06
HLA-DMA-208ENST00000477541 SLC35C1Q96A29 364 aa14.67□□□□□ -0.06
HLA-DMA-208ENST00000477541 MOV10L1Q9BXT6 1211 aaKnown RBP14.67□□□□□ -0.06
HLA-DMA-208ENST00000477541 FGFBP2Q9BYJ0 223 aa14.67□□□□□ -0.06
HLA-DMA-208ENST00000477541 OLFML3Q9NRN5 406 aa14.67□□□□□ -0.06
HLA-DMA-208ENST00000477541 GCNT4Q9P109 453 aa14.67□□□□□ -0.06
HLA-DMA-208ENST00000477541 ANKIB1Q9P2G1 1089 aa14.67□□□□□ -0.06
HLA-DMA-208ENST00000477541 MTRF1LQ9UGC7 380 aaKnown RBP14.67□□□□□ -0.06
HLA-DMA-208ENST00000477541 SLC12A4Q9UP95 1085 aa14.67□□□□□ -0.06
HLA-DMA-208ENST00000477541 CEP83Q9Y592 693 aa14.67□□□□□ -0.06
HLA-DMA-208ENST00000477541 POTEB3A0JP26 581 aa14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 POTECB2RU33 542 aa14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 DDX3YO15523 660 aaKnown RBP14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 GRIN3BO60391 1043 aa14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 CTNND1O60716 968 aaKnown RBP14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 FGGP02679 453 aa14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 NR3C1P04150 777 aa14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 PMS2P54278 862 aa14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 GALCP54803 685 aa14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 SLC8A3P57103 927 aa14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 GABPAQ06546 454 aa14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 PLS1Q14651 629 aa14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 CRYMQ14894 314 aa14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 ARSHQ5FYA8 562 aa14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 KIAA1755Q5JYT7 1200 aa14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 C11orf63Q6NUN7 778 aa14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 POTEBQ6S5H4 581 aa14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 TAOK1Q7L7X3 1001 aa14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 ADGRF4Q8IZF3 695 aa14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 LINC00116Q8NCU8 138 aa14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 HOOK2Q96ED9 719 aa14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 ROPN1BQ9BZX4 212 aaPredicted RBP14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 TAOK3Q9H2K8 898 aa14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 ROPN1Q9HAT0 212 aaPredicted RBP14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 TBC1D7Q9P0N9 293 aa14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 SAMD15Q9P1V8 674 aa14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 TPX2Q9ULW0 747 aaKnown RBP14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 SUGT1Q9Y2Z0 365 aa14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 QSER1Q2KHR3 1735 aa14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 F8W031 263 aaPredicted RBP14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 RPS6KA4O75676 772 aa14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 ACTN1P12814 892 aa14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 ITGA4P13612 1032 aa14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 ERCC3P19447 782 aa14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 ATP2B4P23634 1241 aa14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 MAPK7Q13164 816 aa14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 Q4G0T1 1027 aa14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 GPIHBP1Q8IV16 184 aa14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 U2AF1L4Q8WU68 220 aaKnown RBP14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 ACSBG1Q96GR2 724 aa14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 FAM20AQ96MK3 541 aa14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 SYT11Q9BT88 431 aa14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 HAUS2Q9NVX0 235 aa14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 PCYOX1Q9UHG3 505 aa14.66□□□□□ -0.06
HLA-DMA-208ENST00000477541 GOLGB1Q14789 3259 aaKnown RBP14.65□□□□□ -0.06
HLA-DMA-208ENST00000477541 LOXHD1Q8IVV2 1947 aa14.65□□□□□ -0.06
HLA-DMA-208ENST00000477541 FRMPD2Q68DX3 1309 aaPredicted RBP14.65□□□□□ -0.06
HLA-DMA-208ENST00000477541 ANKRD62A6NC57 917 aa14.65□□□□□ -0.06
HLA-DMA-208ENST00000477541 RGS16O15492 202 aaPredicted RBP14.65□□□□□ -0.06
HLA-DMA-208ENST00000477541 PHF2O75151 1096 aa14.65□□□□□ -0.06
HLA-DMA-208ENST00000477541 MMEP08473 750 aa14.65□□□□□ -0.06
HLA-DMA-208ENST00000477541 PSMC2P35998 433 aaKnown RBP14.65□□□□□ -0.06
HLA-DMA-208ENST00000477541 FLT3P36888 993 aa14.65□□□□□ -0.06
HLA-DMA-208ENST00000477541 KLRC3Q07444 240 aa14.65□□□□□ -0.06
HLA-DMA-208ENST00000477541 PPP2R5AQ15172 486 aa14.65□□□□□ -0.06
HLA-DMA-208ENST00000477541 ENOX2Q16206 610 aaKnown RBP14.65□□□□□ -0.06
HLA-DMA-208ENST00000477541 TNFAIP8L3Q5GJ75 292 aa14.65□□□□□ -0.06
HLA-DMA-208ENST00000477541 MFSD5Q6N075 450 aa14.65□□□□□ -0.06
HLA-DMA-208ENST00000477541 UBL4BQ8N7F7 174 aa14.65□□□□□ -0.06
HLA-DMA-208ENST00000477541 SLC16A10Q8TF71 515 aa14.65□□□□□ -0.06
HLA-DMA-208ENST00000477541 ATXN2LQ8WWM7 1075 aaKnown RBP14.65□□□□□ -0.06
HLA-DMA-208ENST00000477541 POLR3CQ9BUI4 534 aaPredicted RBP14.65□□□□□ -0.06
HLA-DMA-208ENST00000477541 BATF3Q9NR55 127 aa14.65□□□□□ -0.06
HLA-DMA-208ENST00000477541 ATP8A1Q9Y2Q0 1164 aa14.65□□□□□ -0.06
HLA-DMA-208ENST00000477541 ASTN1O14525 1302 aa14.64□□□□□ -0.07
HLA-DMA-208ENST00000477541 FRMPD4Q14CM0 1322 aa14.64□□□□□ -0.07
HLA-DMA-208ENST00000477541 BUB1BO60566 1050 aaPredicted RBP14.64□□□□□ -0.07
HLA-DMA-208ENST00000477541 TBCAO75347 108 aaKnown RBP14.64□□□□□ -0.07
HLA-DMA-208ENST00000477541 MED24O75448 989 aa14.64□□□□□ -0.07
HLA-DMA-208ENST00000477541 AKAP3O75969 853 aa14.64□□□□□ -0.07
HLA-DMA-208ENST00000477541 FOSP01100 380 aaPredicted RBP14.64□□□□□ -0.07
HLA-DMA-208ENST00000477541 ATP5DP30049 168 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms