RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 CRHR2Q13324 411 aa6.06□□□□□ -1.44
UBR3-209ENST00000477461 ARHGAP44Q17R89 818 aa6.06□□□□□ -1.44
UBR3-209ENST00000477461 ZCCHC8Q6NZY4 707 aaKnown RBP6.06□□□□□ -1.44
UBR3-209ENST00000477461 KLHDC10Q6PID8 442 aa6.06□□□□□ -1.44
UBR3-209ENST00000477461 OTOP1Q7RTM1 612 aa6.06□□□□□ -1.44
UBR3-209ENST00000477461 ADGRE4PQ86SQ3 457 aa6.06□□□□□ -1.44
UBR3-209ENST00000477461 THEMISQ8N1K5 641 aaPredicted RBP6.06□□□□□ -1.44
UBR3-209ENST00000477461 ANKRD53Q8N9V6 530 aa6.06□□□□□ -1.44
UBR3-209ENST00000477461 GCDHQ92947 438 aaPredicted RBP6.06□□□□□ -1.44
UBR3-209ENST00000477461 TUBGCP5Q96RT8 1024 aa6.06□□□□□ -1.44
UBR3-209ENST00000477461 FOXB1Q99853 325 aa6.06□□□□□ -1.44
UBR3-209ENST00000477461 MMRN2Q9H8L6 949 aa6.06□□□□□ -1.44
UBR3-209ENST00000477461 KANSL2Q9H9L4 492 aa6.06□□□□□ -1.44
UBR3-209ENST00000477461 GIT1Q9Y2X7 761 aa6.06□□□□□ -1.44
UBR3-209ENST00000477461 CECR2Q9BXF3 1484 aa6.06□□□□□ -1.44
UBR3-209ENST00000477461 TRAF5O00463 557 aa6.05□□□□□ -1.44
UBR3-209ENST00000477461 PPP1R12AO14974 1030 aaPredicted RBP6.05□□□□□ -1.44
UBR3-209ENST00000477461 H2AFYO75367 372 aaKnown RBP6.05□□□□□ -1.44
UBR3-209ENST00000477461 SLC9A1P19634 815 aa6.05□□□□□ -1.44
UBR3-209ENST00000477461 PTX3P26022 381 aaPredicted RBP6.05□□□□□ -1.44
UBR3-209ENST00000477461 RANGAP1P46060 587 aaPredicted RBP6.05□□□□□ -1.44
UBR3-209ENST00000477461 ADCY7P51828 1080 aa6.05□□□□□ -1.44
UBR3-209ENST00000477461 BPIFB4P59827 614 aa6.05□□□□□ -1.44
UBR3-209ENST00000477461 ROM1Q03395 351 aa6.05□□□□□ -1.44
UBR3-209ENST00000477461 RRP1BQ14684 758 aaKnown RBP6.05□□□□□ -1.44
UBR3-209ENST00000477461 PIK3R6Q5UE93 754 aa6.05□□□□□ -1.44
UBR3-209ENST00000477461 FNDC7Q5VTL7 733 aa6.05□□□□□ -1.44
UBR3-209ENST00000477461 PRAMEF9Q5VWM5 478 aa6.05□□□□□ -1.44
UBR3-209ENST00000477461 SLFN12LQ6IEE8 588 aa6.05□□□□□ -1.44
UBR3-209ENST00000477461 CACTINQ8WUQ7 758 aaKnown RBP6.05□□□□□ -1.44
UBR3-209ENST00000477461 RABGGTAQ92696 567 aa6.05□□□□□ -1.44
UBR3-209ENST00000477461 GPHA2Q96T91 129 aa6.05□□□□□ -1.44
UBR3-209ENST00000477461 KRTAP17-1Q9BYP8 105 aa6.05□□□□□ -1.44
UBR3-209ENST00000477461 TRIM8Q9BZR9 551 aa6.05□□□□□ -1.44
UBR3-209ENST00000477461 PCIF1Q9H4Z3 704 aa6.05□□□□□ -1.44
UBR3-209ENST00000477461 SLC2A4RGQ9NR83 387 aa6.05□□□□□ -1.44
UBR3-209ENST00000477461 CDK11AQ9UQ88 783 aaPredicted RBP6.05□□□□□ -1.44
UBR3-209ENST00000477461 REXO2Q9Y3B8 237 aaKnown RBP6.05□□□□□ -1.44
UBR3-209ENST00000477461 EIF4G1Q04637 1599 aaKnown RBP6.05□□□□□ -1.44
UBR3-209ENST00000477461 SMARCA4P51532 1647 aa6.04□□□□□ -1.44
UBR3-209ENST00000477461 UBA6A0AVT1 1052 aaPredicted RBP6.04□□□□□ -1.44
UBR3-209ENST00000477461 DNAJC8O75937 253 aaPredicted RBP6.04□□□□□ -1.44
UBR3-209ENST00000477461 APOL3O95236 402 aa6.04□□□□□ -1.44
UBR3-209ENST00000477461 PRLP01236 227 aa6.04□□□□□ -1.44
UBR3-209ENST00000477461 MCM7P33993 719 aa6.04□□□□□ -1.44
UBR3-209ENST00000477461 IGFALSP35858 605 aa6.04□□□□□ -1.44
UBR3-209ENST00000477461 TUBA3CQ13748 450 aa6.04□□□□□ -1.44
UBR3-209ENST00000477461 DGKDQ16760 1214 aa6.04□□□□□ -1.44
UBR3-209ENST00000477461 TUBA3EQ6PEY2 450 aa6.04□□□□□ -1.44
UBR3-209ENST00000477461 GAREM2Q75VX8 874 aa6.04□□□□□ -1.44
UBR3-209ENST00000477461 KIAA1958Q8N8K9 716 aa6.04□□□□□ -1.44
UBR3-209ENST00000477461 CHST14Q8NCH0 376 aa6.04□□□□□ -1.44
UBR3-209ENST00000477461 UBXN4Q92575 508 aa6.04□□□□□ -1.44
UBR3-209ENST00000477461 CHFRQ96EP1 664 aa6.04□□□□□ -1.44
UBR3-209ENST00000477461 MAML3Q96JK9 1138 aa6.04□□□□□ -1.44
UBR3-209ENST00000477461 OSBPL2Q9H1P3 480 aa6.04□□□□□ -1.44
UBR3-209ENST00000477461 CABP5Q9NP86 173 aa6.04□□□□□ -1.44
UBR3-209ENST00000477461 DNAI1Q9UI46 699 aa6.04□□□□□ -1.44
UBR3-209ENST00000477461 VWA7Q9Y334 891 aa6.04□□□□□ -1.44
UBR3-209ENST00000477461 UBE2QL1A1L167 161 aa6.03□□□□□ -1.44
UBR3-209ENST00000477461 SDSP20132 328 aa6.03□□□□□ -1.44
UBR3-209ENST00000477461 TCIRG1Q13488 830 aa6.03□□□□□ -1.44
UBR3-209ENST00000477461 SQSTM1Q13501 440 aa6.03□□□□□ -1.44
UBR3-209ENST00000477461 C21orf62-AS1Q17RA5 79 aa6.03□□□□□ -1.44
UBR3-209ENST00000477461 TTC38Q5R3I4 469 aa6.03□□□□□ -1.44
UBR3-209ENST00000477461 Q6ZRM9 215 aa6.03□□□□□ -1.44
UBR3-209ENST00000477461 OR5AN1Q8NGI8 311 aa6.03□□□□□ -1.44
UBR3-209ENST00000477461 GFM2Q969S9 779 aaKnown RBP6.03□□□□□ -1.44
UBR3-209ENST00000477461 E2F7Q96AV8 911 aa6.03□□□□□ -1.44
UBR3-209ENST00000477461 SLC7A6OSQ96CW6 309 aaPredicted RBP6.03□□□□□ -1.44
UBR3-209ENST00000477461 SLC6A15Q9H2J7 730 aa6.03□□□□□ -1.44
UBR3-209ENST00000477461 IKZF4Q9H2S9 585 aa6.03□□□□□ -1.44
UBR3-209ENST00000477461 ACSS2Q9NR19 701 aa6.03□□□□□ -1.44
UBR3-209ENST00000477461 CEP72Q9P209 647 aa6.03□□□□□ -1.44
UBR3-209ENST00000477461 NCDNQ9UBB6 729 aa6.03□□□□□ -1.44
UBR3-209ENST00000477461 B4E1Z4 1266 aa6.02□□□□□ -1.45
UBR3-209ENST00000477461 H7C1D1 291 aa6.02□□□□□ -1.45
UBR3-209ENST00000477461 RPS6KA4O75676 772 aa6.02□□□□□ -1.45
UBR3-209ENST00000477461 ASLP04424 464 aa6.02□□□□□ -1.45
UBR3-209ENST00000477461 JMJD7P0C870 316 aa6.02□□□□□ -1.45
UBR3-209ENST00000477461 HNRNPLP14866 589 aaKnown RBP eCLIP6.02□□□□□ -1.45
UBR3-209ENST00000477461 FNTBP49356 437 aa6.02□□□□□ -1.45
UBR3-209ENST00000477461 SCNN1GP51170 649 aa6.02□□□□□ -1.45
UBR3-209ENST00000477461 ZNF174Q15697 407 aa6.02□□□□□ -1.45
UBR3-209ENST00000477461 GSPT2Q8IYD1 628 aaKnown RBP6.02□□□□□ -1.45
UBR3-209ENST00000477461 CLIP3Q96DZ5 547 aa6.02□□□□□ -1.45
UBR3-209ENST00000477461 RCAN3Q9UKA8 241 aa6.02□□□□□ -1.45
UBR3-209ENST00000477461 MROH2BQ7Z745 1585 aa6.01□□□□□ -1.45
UBR3-209ENST00000477461 PMS2P1A4D2B8 440 aa6.01□□□□□ -1.45
UBR3-209ENST00000477461 SESN2P58004 480 aaPredicted RBP6.01□□□□□ -1.45
UBR3-209ENST00000477461 CNGB1Q14028 1251 aaPredicted RBP6.01□□□□□ -1.45
UBR3-209ENST00000477461 FNDC3BQ53EP0 1204 aaKnown RBP6.01□□□□□ -1.45
UBR3-209ENST00000477461 CDCA2Q69YH5 1023 aaPredicted RBP6.01□□□□□ -1.45
UBR3-209ENST00000477461 KRT40Q6A162 431 aa6.01□□□□□ -1.45
UBR3-209ENST00000477461 FAM111BQ6SJ93 734 aa6.01□□□□□ -1.45
UBR3-209ENST00000477461 TMPRSS6Q8IU80 811 aa6.01□□□□□ -1.45
UBR3-209ENST00000477461 PLA2G15Q8NCC3 412 aa6.01□□□□□ -1.45
UBR3-209ENST00000477461 LARP4BQ92615 738 aaKnown RBP6.01□□□□□ -1.45
UBR3-209ENST00000477461 DYDC2Q96IM9 177 aa6.01□□□□□ -1.45
UBR3-209ENST00000477461 C16orf92Q96LL3 132 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms