RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-208	ENST00000477447	LCOR	Q96JN0	433 aa	Predicted RBP	4.55	□□□□□ -1.68
TARDBP-208	ENST00000477447	ACAP3	Q96P50	834 aa		4.55	□□□□□ -1.68
TARDBP-208	ENST00000477447	PITHD1	Q9GZP4	211 aa	Predicted RBP	4.55	□□□□□ -1.68
TARDBP-208	ENST00000477447	CCDC8	Q9H0W5	538 aa	Predicted RBP	4.55	□□□□□ -1.68
TARDBP-208	ENST00000477447	USP40	Q9NVE5	1235 aa		4.55	□□□□□ -1.68
TARDBP-208	ENST00000477447	POLR3B	Q9NW08	1133 aa	Predicted RBP	4.55	□□□□□ -1.68
TARDBP-208	ENST00000477447	KCMF1	Q9P0J7	381 aa		4.55	□□□□□ -1.68
TARDBP-208	ENST00000477447	ZDHHC9	Q9Y397	364 aa		4.55	□□□□□ -1.68
TARDBP-208	ENST00000477447	MYPN	Q86TC9	1320 aa		4.54	□□□□□ -1.68
TARDBP-208	ENST00000477447	MAFG	O15525	162 aa		4.54	□□□□□ -1.68
TARDBP-208	ENST00000477447	MT-CO1	P00395	513 aa		4.54	□□□□□ -1.68
TARDBP-208	ENST00000477447	LPL	P06858	475 aa		4.54	□□□□□ -1.68
TARDBP-208	ENST00000477447	PFKM	P08237	780 aa		4.54	□□□□□ -1.68
TARDBP-208	ENST00000477447	ZNF888	P0CJ79	500 aa	Predicted RBP	4.54	□□□□□ -1.68
TARDBP-208	ENST00000477447	ENPP1	P22413	925 aa		4.54	□□□□□ -1.68
TARDBP-208	ENST00000477447	CSF2RB	P32927	897 aa		4.54	□□□□□ -1.68
TARDBP-208	ENST00000477447	IARS	P41252	1262 aa	Known RBP	4.54	□□□□□ -1.68
TARDBP-208	ENST00000477447	PPARA	Q07869	468 aa		4.54	□□□□□ -1.68
TARDBP-208	ENST00000477447	KLF1	Q13351	362 aa	Predicted RBP	4.54	□□□□□ -1.68
TARDBP-208	ENST00000477447	EIF4H	Q15056	248 aa	Known RBP	4.54	□□□□□ -1.68
TARDBP-208	ENST00000477447	ABCB5	Q2M3G0	1257 aa		4.54	□□□□□ -1.68
TARDBP-208	ENST00000477447	BRDT	Q58F21	947 aa	Predicted RBP	4.54	□□□□□ -1.68
TARDBP-208	ENST00000477447	PITRM1	Q5JRX3	1037 aa		4.54	□□□□□ -1.68
TARDBP-208	ENST00000477447	SYDE2	Q5VT97	1194 aa		4.54	□□□□□ -1.68
TARDBP-208	ENST00000477447	RALYL	Q86SE5	291 aa	Known RBP	4.54	□□□□□ -1.68
TARDBP-208	ENST00000477447	FERMT3	Q86UX7	667 aa		4.54	□□□□□ -1.68
TARDBP-208	ENST00000477447	FAM124A	Q86V42	546 aa		4.54	□□□□□ -1.68
TARDBP-208	ENST00000477447	FEZF2	Q8TBJ5	459 aa		4.54	□□□□□ -1.68
TARDBP-208	ENST00000477447	LMBR1	Q8WVP7	490 aa		4.54	□□□□□ -1.68
TARDBP-208	ENST00000477447	EAF2	Q96CJ1	260 aa	Predicted RBP	4.54	□□□□□ -1.68
TARDBP-208	ENST00000477447	AJUBA	Q96IF1	538 aa		4.54	□□□□□ -1.68
TARDBP-208	ENST00000477447	DYDC2	Q96IM9	177 aa		4.54	□□□□□ -1.68
TARDBP-208	ENST00000477447	NOL10	Q9BSC4	688 aa	Known RBP	4.54	□□□□□ -1.68
TARDBP-208	ENST00000477447	KIAA1683	Q9H0B3	1180 aa		4.54	□□□□□ -1.68
TARDBP-208	ENST00000477447	QRSL1	Q9H0R6	528 aa	Known RBP	4.54	□□□□□ -1.68
TARDBP-208	ENST00000477447	SAE1	Q9UBE0	346 aa	Predicted RBP	4.54	□□□□□ -1.68
TARDBP-208	ENST00000477447	DNAI1	Q9UI46	699 aa		4.54	□□□□□ -1.68
TARDBP-208	ENST00000477447	ADAM29	Q9UKF5	820 aa		4.54	□□□□□ -1.68
TARDBP-208	ENST00000477447	DENND2A	Q9ULE3	1009 aa		4.54	□□□□□ -1.68
TARDBP-208	ENST00000477447	FAM184B	Q9ULE4	1060 aa		4.54	□□□□□ -1.68
TARDBP-208	ENST00000477447	USP18	Q9UMW8	372 aa		4.54	□□□□□ -1.68
TARDBP-208	ENST00000477447	EDAR	Q9UNE0	448 aa		4.54	□□□□□ -1.68
TARDBP-208	ENST00000477447	PTPN22	Q9Y2R2	807 aa		4.54	□□□□□ -1.68
TARDBP-208	ENST00000477447	PCDHB6	Q9Y5E3	794 aa		4.54	□□□□□ -1.68
TARDBP-208	ENST00000477447		A0A0A6YYJ9	748 aa		4.53	□□□□□ -1.68
TARDBP-208	ENST00000477447		K7ESF4	209 aa		4.53	□□□□□ -1.68
TARDBP-208	ENST00000477447	PPM1G	O15355	546 aa	Predicted RBP	4.53	□□□□□ -1.68
TARDBP-208	ENST00000477447	NOBOX	O60393	691 aa		4.53	□□□□□ -1.68
TARDBP-208	ENST00000477447	H2AFY	O75367	372 aa	Known RBP	4.53	□□□□□ -1.68
TARDBP-208	ENST00000477447	SASH1	O94885	1247 aa		4.53	□□□□□ -1.68
TARDBP-208	ENST00000477447	CELA3B	P08861	270 aa		4.53	□□□□□ -1.68
TARDBP-208	ENST00000477447	MYBL2	P10244	700 aa		4.53	□□□□□ -1.68
TARDBP-208	ENST00000477447	MEOX1	P50221	254 aa		4.53	□□□□□ -1.68
TARDBP-208	ENST00000477447	ANTXR2	P58335	489 aa		4.53	□□□□□ -1.68
TARDBP-208	ENST00000477447	JAG1	P78504	1218 aa		4.53	□□□□□ -1.68
TARDBP-208	ENST00000477447	USP10	Q14694	798 aa	Known RBP	4.53	□□□□□ -1.68
TARDBP-208	ENST00000477447	FSCN1	Q16658	493 aa	Known RBP	4.53	□□□□□ -1.68
TARDBP-208	ENST00000477447	UGT8	Q16880	541 aa		4.53	□□□□□ -1.68
TARDBP-208	ENST00000477447	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	4.53	□□□□□ -1.68	7e-8	■□□□□ 8.3
TARDBP-208	ENST00000477447	LARP4	Q71RC2	724 aa	Known RBP eCLIP	4.53	□□□□□ -1.68
TARDBP-208	ENST00000477447	BMP8A	Q7Z5Y6	402 aa		4.53	□□□□□ -1.68
TARDBP-208	ENST00000477447	KRTAP19-1	Q8IUB9	90 aa		4.53	□□□□□ -1.68
TARDBP-208	ENST00000477447	KBTBD2	Q8IY47	623 aa		4.53	□□□□□ -1.68
TARDBP-208	ENST00000477447	BCL6B	Q8N143	479 aa	Predicted RBP	4.53	□□□□□ -1.68
TARDBP-208	ENST00000477447	CDYL2	Q8N8U2	506 aa		4.53	□□□□□ -1.68
TARDBP-208	ENST00000477447	MBD6	Q96DN6	1003 aa		4.53	□□□□□ -1.68
TARDBP-208	ENST00000477447	HIST1H2AH	Q96KK5	128 aa		4.53	□□□□□ -1.68
TARDBP-208	ENST00000477447	HIST1H2AJ	Q99878	128 aa		4.53	□□□□□ -1.68
TARDBP-208	ENST00000477447	MENT	Q9BUN1	341 aa		4.53	□□□□□ -1.68
TARDBP-208	ENST00000477447	CARD11	Q9BXL7	1154 aa		4.53	□□□□□ -1.68
TARDBP-208	ENST00000477447	KATNBL1	Q9H079	304 aa		4.53	□□□□□ -1.68
TARDBP-208	ENST00000477447	WNT8A	Q9H1J5	351 aa		4.53	□□□□□ -1.68
TARDBP-208	ENST00000477447	KCTD10	Q9H3F6	313 aa		4.53	□□□□□ -1.68
TARDBP-208	ENST00000477447	PRDM12	Q9H4Q4	367 aa		4.53	□□□□□ -1.68
TARDBP-208	ENST00000477447	CCM2L	Q9NUG4	571 aa	Predicted RBP	4.53	□□□□□ -1.68
TARDBP-208	ENST00000477447	TYW1	Q9NV66	732 aa	Known RBP	4.53	□□□□□ -1.68
TARDBP-208	ENST00000477447	DDX56	Q9NY93	547 aa	Known RBP	4.53	□□□□□ -1.68
TARDBP-208	ENST00000477447	SYNPO2	Q9UMS6	1093 aa		4.53	□□□□□ -1.68
TARDBP-208	ENST00000477447	WASHC2C	Q9Y4E1	1318 aa		4.52	□□□□□ -1.69
TARDBP-208	ENST00000477447	MRE11	P49959	708 aa		4.52	□□□□□ -1.69
TARDBP-208	ENST00000477447	LGALS4	P56470	323 aa		4.52	□□□□□ -1.69
TARDBP-208	ENST00000477447	KIAA2012	Q0VF49	1180 aa		4.52	□□□□□ -1.69
TARDBP-208	ENST00000477447	SPIDR	Q14159	915 aa		4.52	□□□□□ -1.69
TARDBP-208	ENST00000477447	TRIM25	Q14258	630 aa	Known RBP	4.52	□□□□□ -1.69
TARDBP-208	ENST00000477447	PCOLCE	Q15113	449 aa		4.52	□□□□□ -1.69
TARDBP-208	ENST00000477447	ZNF568	Q3ZCX4	644 aa		4.52	□□□□□ -1.69
TARDBP-208	ENST00000477447	BORA	Q6PGQ7	559 aa		4.52	□□□□□ -1.69
TARDBP-208	ENST00000477447	AMOTL1	Q8IY63	956 aa		4.52	□□□□□ -1.69
TARDBP-208	ENST00000477447	ZDHHC14	Q8IZN3	488 aa		4.52	□□□□□ -1.69
TARDBP-208	ENST00000477447	CBARP	Q8N350	705 aa	Predicted RBP	4.52	□□□□□ -1.69
TARDBP-208	ENST00000477447	MARCH10	Q8NA82	808 aa	Predicted RBP	4.52	□□□□□ -1.69
TARDBP-208	ENST00000477447	STAG1	Q8WVM7	1258 aa		4.52	□□□□□ -1.69
TARDBP-208	ENST00000477447	ASPSCR1	Q9BZE9	553 aa		4.52	□□□□□ -1.69
TARDBP-208	ENST00000477447	HAPLN2	Q9GZV7	340 aa		4.52	□□□□□ -1.69
TARDBP-208	ENST00000477447	ZCCHC4	Q9H5U6	513 aa		4.52	□□□□□ -1.69
TARDBP-208	ENST00000477447	DNAJC28	Q9NX36	388 aa		4.52	□□□□□ -1.69
TARDBP-208	ENST00000477447	TMPRSS11E	Q9UL52	423 aa		4.52	□□□□□ -1.69
TARDBP-208	ENST00000477447	NUMBL	Q9Y6R0	609 aa		4.52	□□□□□ -1.69
TARDBP-208	ENST00000477447	GABRD	O14764	452 aa		4.51	□□□□□ -1.69
TARDBP-208	ENST00000477447	NRP2	O60462	931 aa		4.51	□□□□□ -1.69

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