RNA–Protein interactions for RNA: ENST00000477440.6

ARHGEF3-208, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene ARHGEF3, Length 587 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-208ENST00000477440 HAUS3Q68CZ6 603 aa28.31■■■□□ 2.12
ARHGEF3-208ENST00000477440 DTHD1Q6ZMT9 781 aa28.31■■■□□ 2.12
ARHGEF3-208ENST00000477440 RTN4RL1Q86UN2 441 aaPredicted RBP28.31■■■□□ 2.12
ARHGEF3-208ENST00000477440 RHPN2Q8IUC4 686 aa28.31■■■□□ 2.12
ARHGEF3-208ENST00000477440 ZNF710Q8N1W2 664 aa28.31■■■□□ 2.12
ARHGEF3-208ENST00000477440 NLRP7Q8WX94 980 aa28.31■■■□□ 2.12
ARHGEF3-208ENST00000477440 TMEM143Q96AN5 459 aa28.31■■■□□ 2.12
ARHGEF3-208ENST00000477440 FTHL17Q9BXU8 183 aa28.31■■■□□ 2.12
ARHGEF3-208ENST00000477440 XPNPEP1Q9NQW7 623 aa28.31■■■□□ 2.12
ARHGEF3-208ENST00000477440 PP2D1A8MPX8 630 aa28.3■■■□□ 2.12
ARHGEF3-208ENST00000477440 CCT6AP40227 531 aaKnown RBP28.3■■■□□ 2.12
ARHGEF3-208ENST00000477440 ECM1Q16610 540 aa28.3■■■□□ 2.12
ARHGEF3-208ENST00000477440 KSR1Q8IVT5 923 aa28.3■■■□□ 2.12
ARHGEF3-208ENST00000477440 EXOC8Q8IYI6 725 aa28.3■■■□□ 2.12
ARHGEF3-208ENST00000477440 CCDC43Q96MW1 224 aaKnown RBP28.3■■■□□ 2.12
ARHGEF3-208ENST00000477440 RAD9AQ99638 391 aa28.3■■■□□ 2.12
ARHGEF3-208ENST00000477440 MTRQ99707 1265 aa28.3■■■□□ 2.12
ARHGEF3-208ENST00000477440 RAB34Q9BZG1 259 aa28.3■■■□□ 2.12
ARHGEF3-208ENST00000477440 COL6A3P12111 3177 aa28.29■■■□□ 2.12
ARHGEF3-208ENST00000477440 A0A087WZ62 844 aa28.29■■■□□ 2.12
ARHGEF3-208ENST00000477440 GPR182O15218 404 aa28.29■■■□□ 2.12
ARHGEF3-208ENST00000477440 STX6O43752 255 aa28.29■■■□□ 2.12
ARHGEF3-208ENST00000477440 MGEA5O60502 916 aa28.29■■■□□ 2.12
ARHGEF3-208ENST00000477440 DARSP14868 501 aaKnown RBP28.29■■■□□ 2.12
ARHGEF3-208ENST00000477440 EIF4BP23588 611 aaKnown RBP28.29■■■□□ 2.12
ARHGEF3-208ENST00000477440 SNX29Q8TEQ0 813 aa28.29■■■□□ 2.12
ARHGEF3-208ENST00000477440 CDX2Q99626 313 aaPredicted RBP28.29■■■□□ 2.12
ARHGEF3-208ENST00000477440 FDXACB1Q9BRP7 624 aaPredicted RBP28.29■■■□□ 2.12
ARHGEF3-208ENST00000477440 TSPYL2Q9H2G4 693 aaPredicted RBP28.29■■■□□ 2.12
ARHGEF3-208ENST00000477440 GAS2O43903 313 aaKnown RBP28.28■■■□□ 2.12
ARHGEF3-208ENST00000477440 CSDE1O75534 798 aaKnown RBP28.28■■■□□ 2.12
ARHGEF3-208ENST00000477440 HSP90AA1P07900 732 aaKnown RBP28.28■■■□□ 2.12
ARHGEF3-208ENST00000477440 XRCC6P12956 609 aaKnown RBP eCLIP28.28■■■□□ 2.12
ARHGEF3-208ENST00000477440 HTRA4P83105 476 aaPredicted RBP28.28■■■□□ 2.12
ARHGEF3-208ENST00000477440 ODR4Q5SWX8 454 aa28.28■■■□□ 2.12
ARHGEF3-208ENST00000477440 FAM173BQ6P4H8 233 aa28.28■■■□□ 2.12
ARHGEF3-208ENST00000477440 SPRED2Q7Z698 418 aa28.28■■■□□ 2.12
ARHGEF3-208ENST00000477440 NLRP4Q96MN2 994 aa28.28■■■□□ 2.12
ARHGEF3-208ENST00000477440 NACC1Q96RE7 527 aa28.28■■■□□ 2.12
ARHGEF3-208ENST00000477440 COL4A3BPQ9Y5P4 624 aa28.28■■■□□ 2.12
ARHGEF3-208ENST00000477440 NLRC5Q86WI3 1866 aa28.27■■■□□ 2.12
ARHGEF3-208ENST00000477440 COL4A6Q14031 1691 aa28.27■■■□□ 2.12
ARHGEF3-208ENST00000477440 VWA3AA6NCI4 1184 aa28.27■■■□□ 2.12
ARHGEF3-208ENST00000477440 DGAT1O75907 488 aa28.27■■■□□ 2.12
ARHGEF3-208ENST00000477440 FGFR4P22455 802 aa28.27■■■□□ 2.12
ARHGEF3-208ENST00000477440 CDC25AP30304 524 aa28.27■■■□□ 2.12
ARHGEF3-208ENST00000477440 CDC42EP1Q00587 391 aa28.27■■■□□ 2.12
ARHGEF3-208ENST00000477440 TAP1Q03518 808 aa28.27■■■□□ 2.12
ARHGEF3-208ENST00000477440 ZNF410Q86VK4 478 aa28.27■■■□□ 2.12
ARHGEF3-208ENST00000477440 PRPF31Q8WWY3 499 aaKnown RBP28.27■■■□□ 2.12
ARHGEF3-208ENST00000477440 PSPC1Q8WXF1 523 aaKnown RBP28.27■■■□□ 2.12
ARHGEF3-208ENST00000477440 ATP6V0A4Q9HBG4 840 aa28.27■■■□□ 2.12
ARHGEF3-208ENST00000477440 DBR1Q9UK59 544 aaKnown RBP28.27■■■□□ 2.12
ARHGEF3-208ENST00000477440 USO1O60763 962 aaKnown RBP28.26■■■□□ 2.11
ARHGEF3-208ENST00000477440 MUTP22033 750 aa28.26■■■□□ 2.11
ARHGEF3-208ENST00000477440 SF3A1Q15459 793 aaKnown RBP28.26■■■□□ 2.11
ARHGEF3-208ENST00000477440 ARL6IP4Q66PJ3 421 aaKnown RBP28.26■■■□□ 2.11
ARHGEF3-208ENST00000477440 SPRYD3Q8NCJ5 442 aa28.26■■■□□ 2.11
ARHGEF3-208ENST00000477440 TCP11Q8WWU5 503 aa28.26■■■□□ 2.11
ARHGEF3-208ENST00000477440 MYLIPQ8WY64 445 aa28.26■■■□□ 2.11
ARHGEF3-208ENST00000477440 GCOM2Q9BZD3 368 aaPredicted RBP28.26■■■□□ 2.11
ARHGEF3-208ENST00000477440 INSL6Q9Y581 213 aa28.26■■■□□ 2.11
ARHGEF3-208ENST00000477440 COL4A4P53420 1690 aaPredicted RBP28.26■■■□□ 2.11
ARHGEF3-208ENST00000477440 EYSQ5T1H1 3165 aa28.25■■■□□ 2.11
ARHGEF3-208ENST00000477440 LAMTOR4Q0VGL1 99 aa28.25■■■□□ 2.11
ARHGEF3-208ENST00000477440 ADAM2Q99965 735 aa28.25■■■□□ 2.11
ARHGEF3-208ENST00000477440 MMTAG2Q9BU76 263 aaKnown RBP28.25■■■□□ 2.11
ARHGEF3-208ENST00000477440 PRDM12Q9H4Q4 367 aa28.25■■■□□ 2.11
ARHGEF3-208ENST00000477440 CERS4Q9HA82 394 aa28.25■■■□□ 2.11
ARHGEF3-208ENST00000477440 DDX19AQ9NUU7 478 aaKnown RBP28.25■■■□□ 2.11
ARHGEF3-208ENST00000477440 KIAA1024Q9UPX6 916 aa28.25■■■□□ 2.11
ARHGEF3-208ENST00000477440 STK24Q9Y6E0 443 aa28.25■■■□□ 2.11
ARHGEF3-208ENST00000477440 DENND3A2RUS2 1198 aa28.24■■■□□ 2.11
ARHGEF3-208ENST00000477440 DSC3Q14574 896 aa28.24■■■□□ 2.11
ARHGEF3-208ENST00000477440 KRT79Q5XKE5 535 aa28.24■■■□□ 2.11
ARHGEF3-208ENST00000477440 YME1L1Q96TA2 773 aa28.24■■■□□ 2.11
ARHGEF3-208ENST00000477440 IFT122Q9HBG6 1241 aa28.24■■■□□ 2.11
ARHGEF3-208ENST00000477440 CLIC4Q9Y696 253 aa28.24■■■□□ 2.11
ARHGEF3-208ENST00000477440 TRANK1O15050 2925 aa28.23■■■□□ 2.11
ARHGEF3-208ENST00000477440 LINC01553A4QN01 128 aa28.23■■■□□ 2.11
ARHGEF3-208ENST00000477440 BMP15O95972 392 aa28.23■■■□□ 2.11
ARHGEF3-208ENST00000477440 IBSPP21815 317 aaPredicted RBP28.23■■■□□ 2.11
ARHGEF3-208ENST00000477440 CRIPAKQ8N1N5 446 aa28.23■■■□□ 2.11
ARHGEF3-208ENST00000477440 SP7Q8TDD2 431 aaPredicted RBP28.23■■■□□ 2.11
ARHGEF3-208ENST00000477440 RGS18Q9NS28 235 aa28.23■■■□□ 2.11
ARHGEF3-208ENST00000477440 FNDC1Q4ZHG4 1894 aaPredicted RBP28.23■■■□□ 2.11
ARHGEF3-208ENST00000477440 SRGAP2CP0DJJ0 459 aa28.22■■■□□ 2.11
ARHGEF3-208ENST00000477440 RALGAPA2Q2PPJ7 1873 aa28.22■■■□□ 2.11
ARHGEF3-208ENST00000477440 ASAP3Q8TDY4 903 aa28.22■■■□□ 2.11
ARHGEF3-208ENST00000477440 RC3H2Q9HBD1 1191 aaKnown RBP28.22■■■□□ 2.11
ARHGEF3-208ENST00000477440 GPRC5CQ9NQ84 441 aa28.22■■■□□ 2.11
ARHGEF3-208ENST00000477440 STXBP5LQ9Y2K9 1186 aa28.22■■■□□ 2.11
ARHGEF3-208ENST00000477440 KIAA1671Q9BY89 1806 aa28.22■■■□□ 2.11
ARHGEF3-208ENST00000477440 ARHGEF35A5YM69 484 aa28.21■■■□□ 2.11
ARHGEF3-208ENST00000477440 ARL2P36404 184 aa28.21■■■□□ 2.11
ARHGEF3-208ENST00000477440 SARSP49591 514 aaKnown RBP28.21■■■□□ 2.11
ARHGEF3-208ENST00000477440 GRIN1Q05586 938 aa28.21■■■□□ 2.11
ARHGEF3-208ENST00000477440 PADI6Q6TGC4 694 aa28.21■■■□□ 2.11
ARHGEF3-208ENST00000477440 FAM43BQ6ZT52 329 aaPredicted RBP28.21■■■□□ 2.11
ARHGEF3-208ENST00000477440 MAEAQ7L5Y9 396 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms