RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 M0QZ92 97 aa8.31□□□□□ -1.08
BRCA1-214ENST00000477152 ALADP13716 330 aa8.31□□□□□ -1.08
BRCA1-214ENST00000477152 BRD2P25440 801 aaKnown RBP8.31□□□□□ -1.08
BRCA1-214ENST00000477152 KCNQ1P51787 676 aa8.31□□□□□ -1.08
BRCA1-214ENST00000477152 DEFB103AP81534 67 aa8.31□□□□□ -1.08
BRCA1-214ENST00000477152 TRIM71Q2Q1W2 868 aaKnown RBP8.31□□□□□ -1.08
BRCA1-214ENST00000477152 C11orf91Q3C1V1 193 aa8.31□□□□□ -1.08
BRCA1-214ENST00000477152 FAM117BQ6P1L5 589 aa8.31□□□□□ -1.08
BRCA1-214ENST00000477152 CYB5R4Q7L1T6 521 aa8.31□□□□□ -1.08
BRCA1-214ENST00000477152 CYFIP1Q7L576 1253 aa8.31□□□□□ -1.08
BRCA1-214ENST00000477152 DBF4BQ8NFT6 615 aa8.31□□□□□ -1.08
BRCA1-214ENST00000477152 GDPD5Q8WTR4 605 aa8.31□□□□□ -1.08
BRCA1-214ENST00000477152 PPP1R13LQ8WUF5 828 aa8.31□□□□□ -1.08
BRCA1-214ENST00000477152 GPRASP2Q96D09 838 aa8.31□□□□□ -1.08
BRCA1-214ENST00000477152 MRPL38Q96DV4 380 aaKnown RBP8.31□□□□□ -1.08
BRCA1-214ENST00000477152 ZFP42Q96MM3 310 aa8.31□□□□□ -1.08
BRCA1-214ENST00000477152 ASB16Q96NS5 453 aa8.31□□□□□ -1.08
BRCA1-214ENST00000477152 INPP4AQ96PE3 977 aaPredicted RBP8.31□□□□□ -1.08
BRCA1-214ENST00000477152 C16orf70Q9BSU1 422 aa8.31□□□□□ -1.08
BRCA1-214ENST00000477152 SUGCTQ9HAC7 445 aa8.31□□□□□ -1.08
BRCA1-214ENST00000477152 MTUS1Q9ULD2 1270 aa8.31□□□□□ -1.08
BRCA1-214ENST00000477152 USP20Q9Y2K6 914 aa8.31□□□□□ -1.08
BRCA1-214ENST00000477152 TTLL8A6PVC2 850 aa8.31□□□□□ -1.08
BRCA1-214ENST00000477152 E7EWF7 191 aa8.31□□□□□ -1.08
BRCA1-214ENST00000477152 RB1P06400 928 aa8.31□□□□□ -1.08
BRCA1-214ENST00000477152 CYP21A2P08686 494 aa8.31□□□□□ -1.08
BRCA1-214ENST00000477152 MCM5P33992 734 aa8.31□□□□□ -1.08
BRCA1-214ENST00000477152 HTRA4P83105 476 aaPredicted RBP8.31□□□□□ -1.08
BRCA1-214ENST00000477152 LEXMQ3ZCV2 418 aa8.31□□□□□ -1.08
BRCA1-214ENST00000477152 ODR4Q5SWX8 454 aa8.31□□□□□ -1.08
BRCA1-214ENST00000477152 EXOC6Q8TAG9 804 aa8.31□□□□□ -1.08
BRCA1-214ENST00000477152 GIPC2Q8TF65 315 aa8.31□□□□□ -1.08
BRCA1-214ENST00000477152 SEPT1Q8WYJ6 367 aa8.31□□□□□ -1.08
BRCA1-214ENST00000477152 TOP1MTQ969P6 601 aa8.31□□□□□ -1.08
BRCA1-214ENST00000477152 UPF3BQ9BZI7 483 aaKnown RBP8.31□□□□□ -1.08
BRCA1-214ENST00000477152 GLT8D2Q9H1C3 349 aa8.31□□□□□ -1.08
BRCA1-214ENST00000477152 RNPEPQ9H4A4 650 aa8.31□□□□□ -1.08
BRCA1-214ENST00000477152 SMARCAD1Q9H4L7 1026 aa8.31□□□□□ -1.08
BRCA1-214ENST00000477152 UBE2ZQ9H832 354 aaPredicted RBP8.31□□□□□ -1.08
BRCA1-214ENST00000477152 ERAP1Q9NZ08 941 aa8.31□□□□□ -1.08
BRCA1-214ENST00000477152 FRMPD4Q14CM0 1322 aa8.31□□□□□ -1.08
BRCA1-214ENST00000477152 PRRC2BQ5JSZ5 2229 aaKnown RBP8.31□□□□□ -1.08
BRCA1-214ENST00000477152 EPOPA6NHQ4 379 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 RRN3P2A6NIE6 340 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 OPLAHO14841 1288 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 ST8SIA5O15466 376 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 SORBS3O60504 671 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 GFRA3O60609 400 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 RGS20O76081 388 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 AVPP01185 164 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 ATP4AP20648 1035 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 CHMLP26374 656 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 PLA2G5P39877 138 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 DNM1Q05193 864 aaKnown RBP8.3□□□□□ -1.08
BRCA1-214ENST00000477152 TROAPQ12815 778 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 GPM6BQ13491 265 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 UTP14CQ5TAP6 766 aaKnown RBP8.3□□□□□ -1.08
BRCA1-214ENST00000477152 IER5Q5VY09 327 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 RPAINQ86UA6 219 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 FIBCD1Q8N539 461 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 IL17RAQ96F46 866 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 CTAGE1Q96RT6 745 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 GPR20Q99678 358 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 C11orf84Q9BUA3 381 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-214ENST00000477152 IFIH1Q9BYX4 1025 aaKnown RBP8.3□□□□□ -1.08
BRCA1-214ENST00000477152 AZI2Q9H6S1 392 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 PSTPIP2Q9H939 334 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 BRPF3Q9ULD4 1205 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 POLIQ9UNA4 740 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 NLRC5Q86WI3 1866 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 LCHNA4D1U4 455 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 H3BNC9 293 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 TREHO43280 583 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 LPXNO60711 386 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 PPP1R11O60927 126 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-214ENST00000477152 ZNF16P17020 682 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-214ENST00000477152 HOXC8P31273 242 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 ZNF200P98182 395 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-214ENST00000477152 SP2Q02086 613 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 GPNMBQ14956 572 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 EPC2Q52LR7 807 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 LYSMD3Q7Z3D4 306 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 TREML1Q86YW5 311 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 TMEM192Q8IY95 271 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 ZNF654Q8IZM8 581 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 GLG1Q92896 1179 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 YTHDC1Q96MU7 727 aaKnown RBP8.3□□□□□ -1.08
BRCA1-214ENST00000477152 POP1Q99575 1024 aaKnown RBP8.3□□□□□ -1.08
BRCA1-214ENST00000477152 FTHL17Q9BXU8 183 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 NSUN3Q9H649 340 aaKnown RBP8.3□□□□□ -1.08
BRCA1-214ENST00000477152 RTEL1Q9NZ71 1219 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 PRKAG3Q9UGI9 489 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 DACH1Q9UI36 760 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 SLC12A7Q9Y666 1083 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 SQORQ9Y6N5 450 aa8.3□□□□□ -1.08
BRCA1-214ENST00000477152 COL4A6Q14031 1691 aa8.29□□□□□ -1.08
BRCA1-214ENST00000477152 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-214ENST00000477152 FSD2A1L4K1 749 aa8.29□□□□□ -1.08
BRCA1-214ENST00000477152 SOBPA7XYQ1 873 aa8.29□□□□□ -1.08
BRCA1-214ENST00000477152 SGSM2O43147 1006 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms