RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 RUFY1Q96T51 708 aa22.93■■□□□ 1.26
LIMS2-214ENST00000476932 ZNF577Q9BSK1 485 aa22.93■■□□□ 1.26
LIMS2-214ENST00000476932 STK33Q9BYT3 514 aa22.93■■□□□ 1.26
LIMS2-214ENST00000476932 NCANO14594 1321 aa22.93■■□□□ 1.26
LIMS2-214ENST00000476932 TRIM49P0CI25 452 aa22.92■■□□□ 1.26
LIMS2-214ENST00000476932 TRIM49CP0CI26 452 aa22.92■■□□□ 1.26
LIMS2-214ENST00000476932 CYP2J2P51589 502 aa22.92■■□□□ 1.26
LIMS2-214ENST00000476932 GALCP54803 685 aa22.92■■□□□ 1.26
LIMS2-214ENST00000476932 DRAP1Q14919 205 aaPredicted RBP22.92■■□□□ 1.26
LIMS2-214ENST00000476932 NT5DC3Q86UY8 548 aa22.92■■□□□ 1.26
LIMS2-214ENST00000476932 CDAN1Q8IWY9 1227 aa22.92■■□□□ 1.26
LIMS2-214ENST00000476932 RASGEF1CQ8N431 466 aa22.92■■□□□ 1.26
LIMS2-214ENST00000476932 CNKSR1Q969H4 720 aa22.92■■□□□ 1.26
LIMS2-214ENST00000476932 CALR3Q96L12 384 aaKnown RBP22.92■■□□□ 1.26
LIMS2-214ENST00000476932 WDR11Q9BZH6 1224 aa22.92■■□□□ 1.26
LIMS2-214ENST00000476932 KCND2Q9NZV8 630 aa22.92■■□□□ 1.26
LIMS2-214ENST00000476932 SUCLA2Q9P2R7 463 aaPredicted RBP22.92■■□□□ 1.26
LIMS2-214ENST00000476932 RSPH14Q9UHP6 348 aa22.92■■□□□ 1.26
LIMS2-214ENST00000476932 DNAJC12Q9UKB3 198 aa22.92■■□□□ 1.26
LIMS2-214ENST00000476932 PGRMC1O00264 195 aaKnown RBP22.92■■□□□ 1.26
LIMS2-214ENST00000476932 PPP1R12BO60237 982 aaPredicted RBP22.92■■□□□ 1.26
LIMS2-214ENST00000476932 NPEPPSP55786 919 aa22.92■■□□□ 1.26
LIMS2-214ENST00000476932 SKOR1P84550 965 aa22.92■■□□□ 1.26
LIMS2-214ENST00000476932 CFAP58Q5T655 872 aa22.92■■□□□ 1.26
LIMS2-214ENST00000476932 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.92■■□□□ 1.26
LIMS2-214ENST00000476932 LXNQ9BS40 222 aa22.92■■□□□ 1.26
LIMS2-214ENST00000476932 CAPS2Q9BXY5 557 aa22.92■■□□□ 1.26
LIMS2-214ENST00000476932 ISCUQ9H1K1 167 aa22.92■■□□□ 1.26
LIMS2-214ENST00000476932 TAF1DQ9H5J8 278 aaPredicted RBP22.92■■□□□ 1.26
LIMS2-214ENST00000476932 VCPKMTQ9H867 229 aa22.92■■□□□ 1.26
LIMS2-214ENST00000476932 MRPL11Q9Y3B7 192 aaKnown RBP22.92■■□□□ 1.26
LIMS2-214ENST00000476932 IGSF9BQ9UPX0 1349 aa22.91■■□□□ 1.26
LIMS2-214ENST00000476932 PPIP5K2O43314 1243 aa22.91■■□□□ 1.26
LIMS2-214ENST00000476932 GUCY2CP25092 1073 aa22.91■■□□□ 1.26
LIMS2-214ENST00000476932 ODR4Q5SWX8 454 aa22.91■■□□□ 1.26
LIMS2-214ENST00000476932 HS2ST1Q7LGA3 356 aa22.91■■□□□ 1.26
LIMS2-214ENST00000476932 PEX26Q7Z412 305 aa22.91■■□□□ 1.26
LIMS2-214ENST00000476932 GLYCTKQ8IVS8 523 aa22.91■■□□□ 1.26
LIMS2-214ENST00000476932 CD302Q8IX05 232 aa22.91■■□□□ 1.26
LIMS2-214ENST00000476932 FAM151AQ8WW52 585 aa22.91■■□□□ 1.26
LIMS2-214ENST00000476932 AP1M1Q9BXS5 423 aa22.91■■□□□ 1.26
LIMS2-214ENST00000476932 INTS2Q9H0H0 1204 aaKnown RBP22.91■■□□□ 1.26
LIMS2-214ENST00000476932 FBXO28Q9NVF7 368 aa22.91■■□□□ 1.26
LIMS2-214ENST00000476932 SETQ01105 290 aaPredicted RBP22.91■■□□□ 1.26
LIMS2-214ENST00000476932 SH2D3CQ8N5H7 860 aa22.91■■□□□ 1.26
LIMS2-214ENST00000476932 EIF1ADQ8N9N8 165 aaKnown RBP22.91■■□□□ 1.26
LIMS2-214ENST00000476932 CHURC1Q8WUH1 139 aa22.91■■□□□ 1.26
LIMS2-214ENST00000476932 HES6Q96HZ4 224 aa22.91■■□□□ 1.26
LIMS2-214ENST00000476932 TMOD2Q9NZR1 351 aa22.91■■□□□ 1.26
LIMS2-214ENST00000476932 ZNF70Q9UC06 446 aaPredicted RBP22.91■■□□□ 1.26
LIMS2-214ENST00000476932 COL4A5P29400 1685 aa22.9■■□□□ 1.26
LIMS2-214ENST00000476932 PLA2G6O60733 806 aa22.9■■□□□ 1.26
LIMS2-214ENST00000476932 HSPA9P38646 679 aaKnown RBP22.9■■□□□ 1.26
LIMS2-214ENST00000476932 PPP2R5AQ15172 486 aa22.9■■□□□ 1.26
LIMS2-214ENST00000476932 TEKT3Q9BXF9 490 aa22.9■■□□□ 1.26
LIMS2-214ENST00000476932 OSGEPQ9NPF4 335 aa22.9■■□□□ 1.26
LIMS2-214ENST00000476932 IPO5O00410 1097 aaKnown RBP22.89■■□□□ 1.26
LIMS2-214ENST00000476932 EIF3HO15372 352 aaKnown RBP eCLIP22.89■■□□□ 1.26
LIMS2-214ENST00000476932 ZYXQ15942 572 aaKnown RBP22.89■■□□□ 1.26
LIMS2-214ENST00000476932 LDHDQ86WU2 507 aa22.89■■□□□ 1.26
LIMS2-214ENST00000476932 GLIS2Q9BZE0 524 aaPredicted RBP22.89■■□□□ 1.26
LIMS2-214ENST00000476932 EHMT1Q9H9B1 1298 aa22.89■■□□□ 1.26
LIMS2-214ENST00000476932 TMCO5BA8MYB1 307 aa22.89■■□□□ 1.25
LIMS2-214ENST00000476932 HIP1RO75146 1068 aa22.89■■□□□ 1.25
LIMS2-214ENST00000476932 STXBP4Q6ZWJ1 553 aa22.89■■□□□ 1.25
LIMS2-214ENST00000476932 DAAM2Q86T65 1068 aa22.89■■□□□ 1.25
LIMS2-214ENST00000476932 SLC9A9Q8IVB4 645 aa22.89■■□□□ 1.25
LIMS2-214ENST00000476932 LMBR1Q8WVP7 490 aa22.89■■□□□ 1.25
LIMS2-214ENST00000476932 DDX47Q9H0S4 455 aaKnown RBP22.89■■□□□ 1.25
LIMS2-214ENST00000476932 APEX2Q9UBZ4 518 aa22.89■■□□□ 1.25
LIMS2-214ENST00000476932 FRMD4BQ9Y2L6 1034 aa22.89■■□□□ 1.25
LIMS2-214ENST00000476932 SART1O43290 800 aaKnown RBP22.88■■□□□ 1.25
LIMS2-214ENST00000476932 ITGA4P13612 1032 aa22.88■■□□□ 1.25
LIMS2-214ENST00000476932 LMNB1P20700 586 aa22.88■■□□□ 1.25
LIMS2-214ENST00000476932 GNGT1P63211 74 aa22.88■■□□□ 1.25
LIMS2-214ENST00000476932 MYL7Q01449 175 aa22.88■■□□□ 1.25
LIMS2-214ENST00000476932 SF3B2Q13435 895 aaKnown RBP22.88■■□□□ 1.25
LIMS2-214ENST00000476932 DNAJC21Q5F1R6 531 aaKnown RBP22.88■■□□□ 1.25
LIMS2-214ENST00000476932 SYCE1Q8N0S2 351 aa22.88■■□□□ 1.25
LIMS2-214ENST00000476932 LMO3Q8TAP4 145 aa22.88■■□□□ 1.25
LIMS2-214ENST00000476932 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.88■■□□□ 1.257e-7■■■■■ 58.9
LIMS2-214ENST00000476932 GMLQ99445 158 aa22.88■■□□□ 1.25
LIMS2-214ENST00000476932 DEFB129Q9H1M3 183 aa22.88■■□□□ 1.25
LIMS2-214ENST00000476932 TNS1Q9HBL0 1735 aaKnown RBP22.88■■□□□ 1.25
LIMS2-214ENST00000476932 BUB1BO60566 1050 aaPredicted RBP22.88■■□□□ 1.25
LIMS2-214ENST00000476932 TMEM253P0C7T8 217 aa22.88■■□□□ 1.25
LIMS2-214ENST00000476932 ITGB5P18084 799 aa22.88■■□□□ 1.25
LIMS2-214ENST00000476932 PPATQ06203 517 aa22.88■■□□□ 1.25
LIMS2-214ENST00000476932 BFSP1Q12934 665 aa22.88■■□□□ 1.25
LIMS2-214ENST00000476932 KCTD16Q68DU8 428 aa22.88■■□□□ 1.25
LIMS2-214ENST00000476932 RSBN1LQ6PCB5 846 aaPredicted RBP22.88■■□□□ 1.25
LIMS2-214ENST00000476932 PALB2Q86YC2 1186 aa22.88■■□□□ 1.25
LIMS2-214ENST00000476932 RFFLQ8WZ73 363 aa22.88■■□□□ 1.25
LIMS2-214ENST00000476932 MXRA8Q9BRK3 442 aa22.88■■□□□ 1.25
LIMS2-214ENST00000476932 NEUROG2Q9H2A3 272 aa22.88■■□□□ 1.25
LIMS2-214ENST00000476932 COL20A1Q9P218 1284 aa22.88■■□□□ 1.25
LIMS2-214ENST00000476932 CUL1Q13616 776 aa22.87■■□□□ 1.25
LIMS2-214ENST00000476932 PHLDB3Q6NSJ2 640 aa22.87■■□□□ 1.25
LIMS2-214ENST00000476932 FAM160B2Q86V87 743 aa22.87■■□□□ 1.25
LIMS2-214ENST00000476932 C10orf67Q8IYJ2 551 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms