RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 C16orf70Q9BSU1 422 aa31.79■■■□□ 2.68
VEGFA-211ENST00000476772 INTS13Q9NVM9 706 aa31.79■■■□□ 2.68
VEGFA-211ENST00000476772 FAM184BQ9ULE4 1060 aa31.79■■■□□ 2.68
VEGFA-211ENST00000476772 ZBTB42B2RXF5 422 aa31.78■■■□□ 2.68
VEGFA-211ENST00000476772 NCKAP1LP55160 1127 aa31.78■■■□□ 2.68
VEGFA-211ENST00000476772 DMP1Q13316 513 aaPredicted RBP31.78■■■□□ 2.68
VEGFA-211ENST00000476772 MFSD14CQ5VZR4 134 aa31.78■■■□□ 2.68
VEGFA-211ENST00000476772 PPP4R3CPQ6ZMV5 832 aa31.78■■■□□ 2.68
VEGFA-211ENST00000476772 TRPV1Q8NER1 839 aa31.78■■■□□ 2.68
VEGFA-211ENST00000476772 TMEM143Q96AN5 459 aa31.78■■■□□ 2.68
VEGFA-211ENST00000476772 RNPEPQ9H4A4 650 aa31.78■■■□□ 2.68
VEGFA-211ENST00000476772 C17orf75Q9HAS0 396 aa31.78■■■□□ 2.68
VEGFA-211ENST00000476772 MAGEC2Q9UBF1 373 aaPredicted RBP31.78■■■□□ 2.68
VEGFA-211ENST00000476772 HBP1O60381 514 aa31.77■■■□□ 2.68
VEGFA-211ENST00000476772 EEF1GP26641 437 aaKnown RBP31.77■■■□□ 2.68
VEGFA-211ENST00000476772 NPTX2P47972 431 aa31.77■■■□□ 2.68
VEGFA-211ENST00000476772 RTP1P59025 263 aa31.77■■■□□ 2.68
VEGFA-211ENST00000476772 CNOT6LQ96LI5 555 aaKnown RBP31.77■■■□□ 2.68
VEGFA-211ENST00000476772 TYW1Q9NV66 732 aaKnown RBP31.77■■■□□ 2.68
VEGFA-211ENST00000476772 TRAF3IP3Q9Y228 551 aa31.77■■■□□ 2.68
VEGFA-211ENST00000476772 GPR25O00155 361 aa31.76■■■□□ 2.68
VEGFA-211ENST00000476772 PDXKO00764 312 aa31.76■■■□□ 2.68
VEGFA-211ENST00000476772 SLC16A4O15374 487 aa31.76■■■□□ 2.68
VEGFA-211ENST00000476772 MAFO75444 373 aaPredicted RBP31.76■■■□□ 2.68
VEGFA-211ENST00000476772 FKBP3Q00688 224 aaKnown RBP31.76■■■□□ 2.68
VEGFA-211ENST00000476772 ALCAMQ13740 583 aa31.76■■■□□ 2.68
VEGFA-211ENST00000476772 DGKDQ16760 1214 aa31.76■■■□□ 2.68
VEGFA-211ENST00000476772 FAM114A1Q8IWE2 563 aa31.76■■■□□ 2.68
VEGFA-211ENST00000476772 ANKRD20A12PQ8NF67 263 aa31.76■■■□□ 2.68
VEGFA-211ENST00000476772 CTAGE1Q96RT6 745 aa31.76■■■□□ 2.68
VEGFA-211ENST00000476772 ST6GALNAC4Q9H4F1 302 aa31.76■■■□□ 2.68
VEGFA-211ENST00000476772 NRBP1Q9UHY1 535 aa31.76■■■□□ 2.68
VEGFA-211ENST00000476772 A0A1B0GTH6 734 aa31.76■■■□□ 2.67
VEGFA-211ENST00000476772 CCDC169A6NNP5 214 aa31.76■■■□□ 2.67
VEGFA-211ENST00000476772 FGFR1OPO95684 399 aaKnown RBP31.76■■■□□ 2.67
VEGFA-211ENST00000476772 CYBAP13498 195 aa31.76■■■□□ 2.67
VEGFA-211ENST00000476772 TBC1D8BQ0IIM8 1120 aa31.76■■■□□ 2.67
VEGFA-211ENST00000476772 EDRF1Q3B7T1 1238 aa31.76■■■□□ 2.67
VEGFA-211ENST00000476772 HAUS6Q7Z4H7 955 aa31.76■■■□□ 2.67
VEGFA-211ENST00000476772 SPIRE2Q8WWL2 714 aa31.76■■■□□ 2.67
VEGFA-211ENST00000476772 IKZF4Q9H2S9 585 aa31.76■■■□□ 2.67
VEGFA-211ENST00000476772 TAB2Q9NYJ8 693 aa31.76■■■□□ 2.67
VEGFA-211ENST00000476772 A6NJR5 290 aa31.75■■■□□ 2.67
VEGFA-211ENST00000476772 TGFB1I1O43294 461 aa31.75■■■□□ 2.67
VEGFA-211ENST00000476772 SMTNP53814 917 aa31.75■■■□□ 2.67
VEGFA-211ENST00000476772 SLC17A8Q8NDX2 589 aa31.75■■■□□ 2.67
VEGFA-211ENST00000476772 TRAPPC12Q8WVT3 735 aa31.75■■■□□ 2.67
VEGFA-211ENST00000476772 KIFC3Q9BVG8 833 aa31.75■■■□□ 2.67
VEGFA-211ENST00000476772 KMT5AQ9NQR1 393 aa31.75■■■□□ 2.67
VEGFA-211ENST00000476772 ZNF215Q9UL58 517 aaPredicted RBP31.75■■■□□ 2.67
VEGFA-211ENST00000476772 LRRC10BA6NIK2 292 aa31.74■■■□□ 2.67
VEGFA-211ENST00000476772 CALUO43852 315 aaPredicted RBP31.74■■■□□ 2.67
VEGFA-211ENST00000476772 PTMAP06454 111 aaKnown RBP31.74■■■□□ 2.67
VEGFA-211ENST00000476772 AKR1A1P14550 325 aa31.74■■■□□ 2.67
VEGFA-211ENST00000476772 ARL2P36404 184 aa31.74■■■□□ 2.67
VEGFA-211ENST00000476772 COPB1P53618 953 aaKnown RBP31.74■■■□□ 2.67
VEGFA-211ENST00000476772 ZC3H3Q8IXZ2 948 aaKnown RBP31.74■■■□□ 2.67
VEGFA-211ENST00000476772 IFT74Q96LB3 600 aa31.74■■■□□ 2.67
VEGFA-211ENST00000476772 SRRDQ9UH36 339 aa31.74■■■□□ 2.67
VEGFA-211ENST00000476772 H3BRB1 525 aa31.73■■■□□ 2.67
VEGFA-211ENST00000476772 TPM3P06753 285 aa31.73■■■□□ 2.67
VEGFA-211ENST00000476772 IRX5P78411 483 aaPredicted RBP31.73■■■□□ 2.67
VEGFA-211ENST00000476772 GTF2BQ00403 316 aa31.73■■■□□ 2.67
VEGFA-211ENST00000476772 NR1I3Q14994 352 aa31.73■■■□□ 2.67
VEGFA-211ENST00000476772 TMEM161BQ8NDZ6 487 aa31.73■■■□□ 2.67
VEGFA-211ENST00000476772 ASAP3Q8TDY4 903 aa31.73■■■□□ 2.67
VEGFA-211ENST00000476772 NTPCRQ9BSD7 190 aaKnown RBP31.73■■■□□ 2.67
VEGFA-211ENST00000476772 TUT1Q9H6E5 874 aaKnown RBP31.73■■■□□ 2.67
VEGFA-211ENST00000476772 Q9Y3F1 56 aa31.73■■■□□ 2.67
VEGFA-211ENST00000476772 TRIM32Q13049 653 aa31.73■■■□□ 2.67
VEGFA-211ENST00000476772 CEP63Q96MT8 703 aa31.73■■■□□ 2.67
VEGFA-211ENST00000476772 VPS16Q9H269 839 aa31.73■■■□□ 2.67
VEGFA-211ENST00000476772 ADGRA3Q8IWK6 1321 aa31.72■■■□□ 2.67
VEGFA-211ENST00000476772 GLRA2P23416 452 aa31.72■■■□□ 2.67
VEGFA-211ENST00000476772 NR2F2P24468 414 aa31.72■■■□□ 2.67
VEGFA-211ENST00000476772 PTPN21Q16825 1174 aa31.72■■■□□ 2.67
VEGFA-211ENST00000476772 FILIP1LQ4L180 1135 aa31.72■■■□□ 2.67
VEGFA-211ENST00000476772 AP5M1Q9H0R1 490 aa31.72■■■□□ 2.67
VEGFA-211ENST00000476772 IGKV6-21A0A0C4DH24 114 aa31.71■■■□□ 2.67
VEGFA-211ENST00000476772 INSRRP14616 1297 aa31.71■■■□□ 2.67
VEGFA-211ENST00000476772 HOXD10P28358 340 aa31.71■■■□□ 2.67
VEGFA-211ENST00000476772 ADAM9Q13443 819 aa31.71■■■□□ 2.67
VEGFA-211ENST00000476772 DRP2Q13474 957 aa31.71■■■□□ 2.67
VEGFA-211ENST00000476772 ZNF484Q5JVG2 852 aa31.71■■■□□ 2.67
VEGFA-211ENST00000476772 ACCSQ96QU6 501 aa31.71■■■□□ 2.67
VEGFA-211ENST00000476772 GBP3Q9H0R5 595 aa31.71■■■□□ 2.67
VEGFA-211ENST00000476772 RTN4Q9NQC3 1192 aaKnown RBP31.71■■■□□ 2.67
VEGFA-211ENST00000476772 CLIC2O15247 247 aa31.7■■■□□ 2.67
VEGFA-211ENST00000476772 TEX33O43247 280 aa31.7■■■□□ 2.67
VEGFA-211ENST00000476772 ELNP15502 786 aa31.7■■■□□ 2.67
VEGFA-211ENST00000476772 FILIP1Q7Z7B0 1213 aa31.7■■■□□ 2.67
VEGFA-211ENST00000476772 EXOC8Q8IYI6 725 aa31.7■■■□□ 2.67
VEGFA-211ENST00000476772 SYCP3Q8IZU3 236 aa31.7■■■□□ 2.67
VEGFA-211ENST00000476772 TRIM44Q96DX7 344 aaPredicted RBP31.7■■■□□ 2.67
VEGFA-211ENST00000476772 TMEM206Q9H813 350 aa31.7■■■□□ 2.67
VEGFA-211ENST00000476772 DENND3A2RUS2 1198 aa31.7■■■□□ 2.66
VEGFA-211ENST00000476772 N4BP3O15049 544 aa31.7■■■□□ 2.66
VEGFA-211ENST00000476772 CETN3O15182 167 aa31.7■■■□□ 2.66
VEGFA-211ENST00000476772 NR3C1P04150 777 aa31.7■■■□□ 2.66
VEGFA-211ENST00000476772 MTIF2P46199 727 aaKnown RBP31.7■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms