RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 ADAM2Q99965 735 aa11.42□□□□□ -0.58
CCM2-208ENST00000476594 PLVAPQ9BX97 442 aa11.42□□□□□ -0.58
CCM2-208ENST00000476594 OSBPL7Q9BZF2 842 aa11.42□□□□□ -0.58
CCM2-208ENST00000476594 LMAN2LQ9H0V9 348 aa11.42□□□□□ -0.58
CCM2-208ENST00000476594 ELAC1Q9H777 363 aaKnown RBP11.42□□□□□ -0.58
CCM2-208ENST00000476594 ATP6V0A4Q9HBG4 840 aa11.42□□□□□ -0.58
CCM2-208ENST00000476594 AAASQ9NRG9 546 aa11.42□□□□□ -0.58
CCM2-208ENST00000476594 RGS18Q9NS28 235 aa11.42□□□□□ -0.58
CCM2-208ENST00000476594 SUCLA2Q9P2R7 463 aaPredicted RBP11.42□□□□□ -0.58
CCM2-208ENST00000476594 IGKV6-21A0A0C4DH24 114 aa11.41□□□□□ -0.58
CCM2-208ENST00000476594 CARNS1A5YM72 827 aa11.41□□□□□ -0.58
CCM2-208ENST00000476594 FAM205CA6NFA0 338 aa11.41□□□□□ -0.58
CCM2-208ENST00000476594 H3BNC9 293 aa11.41□□□□□ -0.58
CCM2-208ENST00000476594 H3BQV1 296 aa11.41□□□□□ -0.58
CCM2-208ENST00000476594 DTNBO60941 627 aa11.41□□□□□ -0.58
CCM2-208ENST00000476594 ARHGEF15O94989 841 aa11.41□□□□□ -0.58
CCM2-208ENST00000476594 OR52Z1P0C646 297 aa11.41□□□□□ -0.58
CCM2-208ENST00000476594 SKIP12755 728 aa11.41□□□□□ -0.58
CCM2-208ENST00000476594 DARSP14868 501 aaKnown RBP11.41□□□□□ -0.58
CCM2-208ENST00000476594 MCM7P33993 719 aa11.41□□□□□ -0.58
CCM2-208ENST00000476594 MRPS5P82675 430 aaKnown RBP11.41□□□□□ -0.58
CCM2-208ENST00000476594 CYP4A11Q02928 519 aa11.41□□□□□ -0.58
CCM2-208ENST00000476594 GPM6BQ13491 265 aa11.41□□□□□ -0.58
CCM2-208ENST00000476594 CSPP1Q1MSJ5 1256 aa11.41□□□□□ -0.58
CCM2-208ENST00000476594 XKR9Q5GH70 373 aa11.41□□□□□ -0.58
CCM2-208ENST00000476594 TJAP1Q5JTD0 557 aa11.41□□□□□ -0.58
CCM2-208ENST00000476594 TTC38Q5R3I4 469 aa11.41□□□□□ -0.58
CCM2-208ENST00000476594 SPOUT1Q5T280 376 aaKnown RBP11.41□□□□□ -0.58
CCM2-208ENST00000476594 ANO5Q75V66 913 aa11.41□□□□□ -0.58
CCM2-208ENST00000476594 FAM228AQ86W67 206 aa11.41□□□□□ -0.58
CCM2-208ENST00000476594 RHPN2Q8IUC4 686 aa11.41□□□□□ -0.58
CCM2-208ENST00000476594 TPH2Q8IWU9 490 aa11.41□□□□□ -0.58
CCM2-208ENST00000476594 ZNF689Q96CS4 500 aaPredicted RBP11.41□□□□□ -0.58
CCM2-208ENST00000476594 DYDC2Q96IM9 177 aa11.41□□□□□ -0.58
CCM2-208ENST00000476594 MTRQ99707 1265 aa11.41□□□□□ -0.58
CCM2-208ENST00000476594 EIF2AK1Q9BQI3 630 aaKnown RBP11.41□□□□□ -0.58
CCM2-208ENST00000476594 C17orf80Q9BSJ5 609 aa11.41□□□□□ -0.58
CCM2-208ENST00000476594 ADAMTS10Q9H324 1103 aa11.41□□□□□ -0.58
CCM2-208ENST00000476594 CHST12Q9NRB3 414 aa11.41□□□□□ -0.58
CCM2-208ENST00000476594 TMEM161AQ9NX61 479 aa11.41□□□□□ -0.58
CCM2-208ENST00000476594 SMC3Q9UQE7 1217 aa11.41□□□□□ -0.58
CCM2-208ENST00000476594 TTC3P53804 2025 aa11.41□□□□□ -0.58
CCM2-208ENST00000476594 CHD7Q9P2D1 2997 aa11.41□□□□□ -0.58
CCM2-208ENST00000476594 WDR81Q562E7 1941 aa11.41□□□□□ -0.58
CCM2-208ENST00000476594 C5orf67F2Z3F1 127 aa11.4□□□□□ -0.58
CCM2-208ENST00000476594 RFXAPO00287 272 aa11.4□□□□□ -0.58
CCM2-208ENST00000476594 LAD1O00515 517 aa11.4□□□□□ -0.58
CCM2-208ENST00000476594 DGAT1O75907 488 aa11.4□□□□□ -0.58
CCM2-208ENST00000476594 LYPLA2O95372 231 aa11.4□□□□□ -0.58
CCM2-208ENST00000476594 XRCC6P12956 609 aaKnown RBP eCLIP11.4□□□□□ -0.58
CCM2-208ENST00000476594 IBSPP21815 317 aaPredicted RBP11.4□□□□□ -0.58
CCM2-208ENST00000476594 MUTP22033 750 aa11.4□□□□□ -0.58
CCM2-208ENST00000476594 BMPR1AP36894 532 aa11.4□□□□□ -0.58
CCM2-208ENST00000476594 RAB27AP51159 221 aa11.4□□□□□ -0.58
CCM2-208ENST00000476594 SPIRE1Q08AE8 756 aa11.4□□□□□ -0.58
CCM2-208ENST00000476594 NCBP1Q09161 790 aaKnown RBP11.4□□□□□ -0.58
CCM2-208ENST00000476594 TFDP1Q14186 410 aa11.4□□□□□ -0.58
CCM2-208ENST00000476594 CTTNQ14247 550 aaKnown RBP11.4□□□□□ -0.58
CCM2-208ENST00000476594 MXD4Q14582 209 aaPredicted RBP11.4□□□□□ -0.58
CCM2-208ENST00000476594 PCBP1Q15365 356 aaKnown RBP eCLIP11.4□□□□□ -0.58
CCM2-208ENST00000476594 PLA2G4FQ68DD2 849 aa11.4□□□□□ -0.58
CCM2-208ENST00000476594 TMEM40Q8WWA1 233 aa11.4□□□□□ -0.58
CCM2-208ENST00000476594 LINC01599Q8WXQ3 324 aa11.4□□□□□ -0.58
CCM2-208ENST00000476594 CLP1Q92989 425 aaKnown RBP11.4□□□□□ -0.58
CCM2-208ENST00000476594 MRPL38Q96DV4 380 aaKnown RBP11.4□□□□□ -0.58
CCM2-208ENST00000476594 TMX3Q96JJ7 454 aa11.4□□□□□ -0.58
CCM2-208ENST00000476594 TUFT1Q9NNX1 390 aa11.4□□□□□ -0.58
CCM2-208ENST00000476594 ANKEF1Q9NU02 776 aa11.4□□□□□ -0.58
CCM2-208ENST00000476594 PCDHB12Q9Y5F1 795 aa11.4□□□□□ -0.58
CCM2-208ENST00000476594 COL4A3BPQ9Y5P4 624 aa11.4□□□□□ -0.58
CCM2-208ENST00000476594 RALGAPA2Q2PPJ7 1873 aa11.4□□□□□ -0.59
CCM2-208ENST00000476594 EPOPA6NHQ4 379 aa11.39□□□□□ -0.59
CCM2-208ENST00000476594 C9IYK1 514 aa11.39□□□□□ -0.59
CCM2-208ENST00000476594 DLL1O00548 723 aa11.39□□□□□ -0.59
CCM2-208ENST00000476594 NCK2O43639 380 aa11.39□□□□□ -0.59
CCM2-208ENST00000476594 SLITRK3O94933 977 aa11.39□□□□□ -0.59
CCM2-208ENST00000476594 EOMESO95936 686 aa11.39□□□□□ -0.59
CCM2-208ENST00000476594 U2AF2P26368 475 aaKnown RBP eCLIP11.39□□□□□ -0.59
CCM2-208ENST00000476594 PHKA2P46019 1235 aa11.39□□□□□ -0.59
CCM2-208ENST00000476594 EMC2Q15006 297 aa11.39□□□□□ -0.59
CCM2-208ENST00000476594 RILPL1Q5EBL4 403 aa11.39□□□□□ -0.59
CCM2-208ENST00000476594 MCTP1Q6DN14 999 aa11.39□□□□□ -0.59
CCM2-208ENST00000476594 CATSPER4Q7RTX7 472 aa11.39□□□□□ -0.59
CCM2-208ENST00000476594 SRGAP1Q7Z6B7 1085 aa11.39□□□□□ -0.59
CCM2-208ENST00000476594 RTN4RL1Q86UN2 441 aaPredicted RBP11.39□□□□□ -0.59
CCM2-208ENST00000476594 P2RX5Q93086 422 aa11.39□□□□□ -0.59
CCM2-208ENST00000476594 HLA-CQ95604 372 aa11.39□□□□□ -0.59
CCM2-208ENST00000476594 NLRP4Q96MN2 994 aa11.39□□□□□ -0.59
CCM2-208ENST00000476594 MTMR9Q96QG7 549 aa11.39□□□□□ -0.59
CCM2-208ENST00000476594 MRPL9Q9BYD2 267 aaKnown RBP11.39□□□□□ -0.59
CCM2-208ENST00000476594 TMX1Q9H3N1 280 aa11.39□□□□□ -0.59
CCM2-208ENST00000476594 DHX33Q9H6R0 707 aaKnown RBP11.39□□□□□ -0.59
CCM2-208ENST00000476594 CDHR5Q9HBB8 845 aa11.39□□□□□ -0.59
CCM2-208ENST00000476594 RC3H2Q9HBD1 1191 aaKnown RBP11.39□□□□□ -0.59
CCM2-208ENST00000476594 RGL1Q9NZL6 768 aa11.39□□□□□ -0.59
CCM2-208ENST00000476594 TRANK1O15050 2925 aa11.39□□□□□ -0.59
CCM2-208ENST00000476594 LOXHD1Q8IVV2 1947 aa11.39□□□□□ -0.59
CCM2-208ENST00000476594 PRRC2BQ5JSZ5 2229 aaKnown RBP11.38□□□□□ -0.59
CCM2-208ENST00000476594 A0A087WZ62 844 aa11.38□□□□□ -0.59
CCM2-208ENST00000476594 FSD2A1L4K1 749 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms