RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 POTEEQ6S8J3 1075 aa14.91□□□□□ -0.02
HDAC1-206ENST00000476391 PEX26Q7Z412 305 aa14.91□□□□□ -0.02
HDAC1-206ENST00000476391 SYCE1Q8N0S2 351 aa14.91□□□□□ -0.02
HDAC1-206ENST00000476391 MGARPQ8TDB4 240 aa14.91□□□□□ -0.02
HDAC1-206ENST00000476391 ERP27Q96DN0 273 aa14.91□□□□□ -0.02
HDAC1-206ENST00000476391 LRRC37BQ96QE4 947 aa14.91□□□□□ -0.02
HDAC1-206ENST00000476391 TRIM9Q9C026 710 aa14.91□□□□□ -0.02
HDAC1-206ENST00000476391 PARP2Q9UGN5 583 aa14.91□□□□□ -0.02
HDAC1-206ENST00000476391 HAO1Q9UJM8 370 aa14.91□□□□□ -0.02
HDAC1-206ENST00000476391 TACC3Q9Y6A5 838 aa14.91□□□□□ -0.02
HDAC1-206ENST00000476391 ATP8B3O60423 1300 aa14.91□□□□□ -0.02
HDAC1-206ENST00000476391 HNRNPCL1O60812 293 aaKnown RBP14.91□□□□□ -0.02
HDAC1-206ENST00000476391 TARSP26639 723 aaKnown RBP14.91□□□□□ -0.02
HDAC1-206ENST00000476391 EPHB2P29323 1055 aa14.91□□□□□ -0.02
HDAC1-206ENST00000476391 ZDHHC24Q6UX98 284 aa14.91□□□□□ -0.02
HDAC1-206ENST00000476391 PI16Q6UXB8 463 aa14.91□□□□□ -0.02
HDAC1-206ENST00000476391 DTHD1Q6ZMT9 781 aa14.91□□□□□ -0.02
HDAC1-206ENST00000476391 LRRC74BQ6ZQY2 392 aa14.91□□□□□ -0.02
HDAC1-206ENST00000476391 PLBD2Q8NHP8 589 aa14.91□□□□□ -0.02
HDAC1-206ENST00000476391 WDR66Q8TBY9 1149 aa14.91□□□□□ -0.02
HDAC1-206ENST00000476391 RUNDC3BQ96NL0 473 aa14.91□□□□□ -0.02
HDAC1-206ENST00000476391 C7orf25Q9BPX7 421 aa14.91□□□□□ -0.02
HDAC1-206ENST00000476391 PUS3Q9BZE2 481 aaKnown RBP14.91□□□□□ -0.02
HDAC1-206ENST00000476391 SEMA4AQ9H3S1 761 aa14.91□□□□□ -0.02
HDAC1-206ENST00000476391 DDX43Q9NXZ2 648 aaKnown RBP14.91□□□□□ -0.02
HDAC1-206ENST00000476391 MTRF1LQ9UGC7 380 aaKnown RBP14.91□□□□□ -0.02
HDAC1-206ENST00000476391 STXBP5LQ9Y2K9 1186 aa14.91□□□□□ -0.02
HDAC1-206ENST00000476391 V9GY48 417 aaPredicted RBP14.91□□□□□ -0.02
HDAC1-206ENST00000476391 PITPNM2Q9BZ72 1349 aa14.9□□□□□ -0.02
HDAC1-206ENST00000476391 ZNF532Q9HCE3 1301 aa14.9□□□□□ -0.02
HDAC1-206ENST00000476391 ADAMTS13Q76LX8 1427 aa14.9□□□□□ -0.02
HDAC1-206ENST00000476391 C1orf167Q5SNV9 1468 aa14.9□□□□□ -0.02
HDAC1-206ENST00000476391 RIPK2O43353 540 aa14.9□□□□□ -0.02
HDAC1-206ENST00000476391 DCTN3O75935 186 aa14.9□□□□□ -0.02
HDAC1-206ENST00000476391 SLCO1A2P46721 670 aa14.9□□□□□ -0.02
HDAC1-206ENST00000476391 PLTPP55058 493 aa14.9□□□□□ -0.02
HDAC1-206ENST00000476391 SLC34A1Q06495 639 aa14.9□□□□□ -0.02
HDAC1-206ENST00000476391 KLHL30Q0D2K2 578 aa14.9□□□□□ -0.02
HDAC1-206ENST00000476391 TMED1Q13445 227 aa14.9□□□□□ -0.02
HDAC1-206ENST00000476391 KIAA1755Q5JYT7 1200 aa14.9□□□□□ -0.02
HDAC1-206ENST00000476391 SOGA3Q5TF21 947 aa14.9□□□□□ -0.02
HDAC1-206ENST00000476391 VSTM1Q6UX27 236 aa14.9□□□□□ -0.02
HDAC1-206ENST00000476391 C4orf50Q6ZRC1 276 aa14.9□□□□□ -0.02
HDAC1-206ENST00000476391 BARGINQ6ZT62 677 aa14.9□□□□□ -0.02
HDAC1-206ENST00000476391 TPCN2Q8NHX9 752 aa14.9□□□□□ -0.02
HDAC1-206ENST00000476391 FBXO25Q8TCJ0 367 aa14.9□□□□□ -0.02
HDAC1-206ENST00000476391 ARHGEF2Q92974 986 aaKnown RBP14.9□□□□□ -0.02
HDAC1-206ENST00000476391 DDX27Q96GQ7 796 aaKnown RBP14.9□□□□□ -0.02
HDAC1-206ENST00000476391 METTL14Q9HCE5 456 aaKnown RBP14.9□□□□□ -0.02
HDAC1-206ENST00000476391 DBR1Q9UK59 544 aaKnown RBP14.9□□□□□ -0.02
HDAC1-206ENST00000476391 TBC1D30Q9Y2I9 924 aa14.9□□□□□ -0.02
HDAC1-206ENST00000476391 DIS3Q9Y2L1 958 aaKnown RBP14.9□□□□□ -0.02
HDAC1-206ENST00000476391 USH1CQ9Y6N9 552 aa14.9□□□□□ -0.02
HDAC1-206ENST00000476391 RGPD8O14715 1765 aaPredicted RBP14.9□□□□□ -0.02
HDAC1-206ENST00000476391 RGPD2P0DJD1 1756 aa14.9□□□□□ -0.02
HDAC1-206ENST00000476391 MAPK13O15264 365 aa14.9□□□□□ -0.02
HDAC1-206ENST00000476391 NOL4O94818 638 aa14.9□□□□□ -0.02
HDAC1-206ENST00000476391 ASLP04424 464 aa14.9□□□□□ -0.02
HDAC1-206ENST00000476391 PCCAP05165 728 aaPredicted RBP14.9□□□□□ -0.02
HDAC1-206ENST00000476391 LYNP07948 512 aa14.9□□□□□ -0.02
HDAC1-206ENST00000476391 CEBPAP49715 358 aaPredicted RBP14.9□□□□□ -0.02
HDAC1-206ENST00000476391 SULT2A1Q06520 285 aa14.9□□□□□ -0.02
HDAC1-206ENST00000476391 TMEM62Q0P6H9 643 aa14.9□□□□□ -0.02
HDAC1-206ENST00000476391 AP1B1Q10567 949 aa14.9□□□□□ -0.02
HDAC1-206ENST00000476391 SMYD1Q8NB12 490 aa14.9□□□□□ -0.02
HDAC1-206ENST00000476391 ZNF512BQ96KM6 892 aaPredicted RBP14.9□□□□□ -0.02
HDAC1-206ENST00000476391 ZNF184Q99676 751 aaPredicted RBP14.9□□□□□ -0.02
HDAC1-206ENST00000476391 KIAA1683Q9H0B3 1180 aa14.9□□□□□ -0.02
HDAC1-206ENST00000476391 DHX36Q9H2U1 1008 aaKnown RBP14.9□□□□□ -0.02
HDAC1-206ENST00000476391 EPB41L4AQ9HCS5 686 aaPredicted RBP14.9□□□□□ -0.02
HDAC1-206ENST00000476391 RASAL2Q9UJF2 1139 aa14.9□□□□□ -0.02
HDAC1-206ENST00000476391 CASZ1Q86V15 1759 aa14.89□□□□□ -0.03
HDAC1-206ENST00000476391 HGSO14964 777 aaPredicted RBP14.89□□□□□ -0.03
HDAC1-206ENST00000476391 KIAA0391O15091 583 aaKnown RBP14.89□□□□□ -0.03
HDAC1-206ENST00000476391 MBD4O95243 580 aa14.89□□□□□ -0.03
HDAC1-206ENST00000476391 CYP1A1P04798 512 aaPredicted RBP14.89□□□□□ -0.03
HDAC1-206ENST00000476391 FCER1AP12319 257 aa14.89□□□□□ -0.03
HDAC1-206ENST00000476391 RARGP13631 454 aa14.89□□□□□ -0.03
HDAC1-206ENST00000476391 EIF4BP23588 611 aaKnown RBP14.89□□□□□ -0.03
HDAC1-206ENST00000476391 MCAMP43121 646 aa14.89□□□□□ -0.03
HDAC1-206ENST00000476391 CDK7P50613 346 aa14.89□□□□□ -0.03
HDAC1-206ENST00000476391 LRRC63Q05C16 580 aa14.89□□□□□ -0.03
HDAC1-206ENST00000476391 KHDC1Q4VXA5 237 aaKnown RBP14.89□□□□□ -0.03
HDAC1-206ENST00000476391 GALNT17Q6IS24 598 aa14.89□□□□□ -0.03
HDAC1-206ENST00000476391 NELFCDQ8IXH7 590 aa14.89□□□□□ -0.03
HDAC1-206ENST00000476391 LRRC43Q8N309 656 aa14.89□□□□□ -0.03
HDAC1-206ENST00000476391 ZBTB8BQ8NAP8 495 aaPredicted RBP14.89□□□□□ -0.03
HDAC1-206ENST00000476391 KIAA0895Q8NCT3 520 aa14.89□□□□□ -0.03
HDAC1-206ENST00000476391 LENG1Q96BZ8 264 aaPredicted RBP14.89□□□□□ -0.03
HDAC1-206ENST00000476391 SERPINB12Q96P63 405 aa14.89□□□□□ -0.03
HDAC1-206ENST00000476391 RHBDL2Q9NX52 303 aa14.89□□□□□ -0.03
HDAC1-206ENST00000476391 PASKQ96RG2 1323 aa14.89□□□□□ -0.03
HDAC1-206ENST00000476391 MAP3K7O43318 606 aa14.88□□□□□ -0.03
HDAC1-206ENST00000476391 VIL1P09327 827 aaKnown RBP14.88□□□□□ -0.03
HDAC1-206ENST00000476391 PTPN4P29074 926 aa14.88□□□□□ -0.03
HDAC1-206ENST00000476391 STX2P32856 288 aa14.88□□□□□ -0.03
HDAC1-206ENST00000476391 SESN3P58005 492 aa14.88□□□□□ -0.03
HDAC1-206ENST00000476391 ASIC1P78348 528 aa14.88□□□□□ -0.03
HDAC1-206ENST00000476391 CLUL1Q15846 466 aa14.88□□□□□ -0.03
HDAC1-206ENST00000476391 ZC2HC1CQ53FD0 456 aaPredicted RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms