RNA–Protein interactions for RNA: ENST00000476089.1

ITGA4-207, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,846 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-207ENST00000476089 ARID2Q68CP9 1835 aa22.5■■□□□ 1.19
ITGA4-207ENST00000476089 SLC16A4O15374 487 aa22.49■■□□□ 1.19
ITGA4-207ENST00000476089 POLGP54098 1239 aaPredicted RBP22.49■■□□□ 1.19
ITGA4-207ENST00000476089 NCKAP1LP55160 1127 aa22.49■■□□□ 1.19
ITGA4-207ENST00000476089 GTF2BQ00403 316 aa22.49■■□□□ 1.19
ITGA4-207ENST00000476089 PLEKHH3Q7Z736 793 aa22.49■■□□□ 1.19
ITGA4-207ENST00000476089 ZNF467Q7Z7K2 595 aaPredicted RBP22.49■■□□□ 1.19
ITGA4-207ENST00000476089 OR8K1Q8NGG5 319 aa22.49■■□□□ 1.19
ITGA4-207ENST00000476089 ZCCHC17Q9NP64 241 aaKnown RBP22.49■■□□□ 1.19
ITGA4-207ENST00000476089 AGPAT3Q9NRZ7 376 aa22.49■■□□□ 1.19
ITGA4-207ENST00000476089 CGNQ9P2M7 1197 aaKnown RBP22.49■■□□□ 1.19
ITGA4-207ENST00000476089 FRMD4BQ9Y2L6 1034 aa22.49■■□□□ 1.19
ITGA4-207ENST00000476089 MCM3APO60318 1980 aa22.49■■□□□ 1.19
ITGA4-207ENST00000476089 PLXNA1Q9UIW2 1896 aa22.49■■□□□ 1.19
ITGA4-207ENST00000476089 AKAP3O75969 853 aa22.48■■□□□ 1.19
ITGA4-207ENST00000476089 ATP4AP20648 1035 aa22.48■■□□□ 1.19
ITGA4-207ENST00000476089 PSMC2P35998 433 aaKnown RBP22.48■■□□□ 1.19
ITGA4-207ENST00000476089 CCDC62Q6P9F0 684 aa22.48■■□□□ 1.19
ITGA4-207ENST00000476089 SAPCD2Q86UD0 394 aa22.48■■□□□ 1.19
ITGA4-207ENST00000476089 FAM167AQ96KS9 214 aa22.48■■□□□ 1.19
ITGA4-207ENST00000476089 IFT74Q96LB3 600 aa22.48■■□□□ 1.19
ITGA4-207ENST00000476089 SPATA33Q96N06 139 aa22.48■■□□□ 1.19
ITGA4-207ENST00000476089 NIFKQ9BYG3 293 aaKnown RBP22.48■■□□□ 1.19
ITGA4-207ENST00000476089 MMRN2Q9H8L6 949 aa22.48■■□□□ 1.19
ITGA4-207ENST00000476089 VTA1Q9NP79 307 aa22.48■■□□□ 1.19
ITGA4-207ENST00000476089 KMT5AQ9NQR1 393 aa22.48■■□□□ 1.19
ITGA4-207ENST00000476089 PDLIM7Q9NR12 457 aa22.48■■□□□ 1.19
ITGA4-207ENST00000476089 EXOC7Q9UPT5 735 aa22.48■■□□□ 1.19
ITGA4-207ENST00000476089 XRCC5P13010 732 aaKnown RBP22.47■■□□□ 1.19
ITGA4-207ENST00000476089 KLK7P49862 253 aa22.47■■□□□ 1.19
ITGA4-207ENST00000476089 RTP1P59025 263 aa22.47■■□□□ 1.19
ITGA4-207ENST00000476089 MYBPC2Q14324 1141 aa22.47■■□□□ 1.19
ITGA4-207ENST00000476089 TMTC1Q8IUR5 882 aa22.47■■□□□ 1.19
ITGA4-207ENST00000476089 SPIRE2Q8WWL2 714 aa22.47■■□□□ 1.19
ITGA4-207ENST00000476089 GLG1Q92896 1179 aa22.47■■□□□ 1.19
ITGA4-207ENST00000476089 HVCN1Q96D96 273 aa22.47■■□□□ 1.19
ITGA4-207ENST00000476089 GPR20Q99678 358 aa22.47■■□□□ 1.19
ITGA4-207ENST00000476089 MKNK1Q9BUB5 465 aa22.47■■□□□ 1.19
ITGA4-207ENST00000476089 SIK3Q9Y2K2 1263 aa22.47■■□□□ 1.19
ITGA4-207ENST00000476089 A0A1W2PQJ5 194 aa22.47■■□□□ 1.19
ITGA4-207ENST00000476089 USP27XA6NNY8 438 aa22.47■■□□□ 1.19
ITGA4-207ENST00000476089 ZSCAN12O43309 604 aa22.47■■□□□ 1.19
ITGA4-207ENST00000476089 NPTX2P47972 431 aa22.47■■□□□ 1.19
ITGA4-207ENST00000476089 SNRPFP62306 86 aaKnown RBP22.47■■□□□ 1.19
ITGA4-207ENST00000476089 GRB14Q14449 540 aa22.47■■□□□ 1.19
ITGA4-207ENST00000476089 CYP26C1Q6V0L0 522 aa22.47■■□□□ 1.19
ITGA4-207ENST00000476089 SLC7A3Q8WY07 619 aa22.47■■□□□ 1.19
ITGA4-207ENST00000476089 C16orf45Q96MC5 204 aaPredicted RBP22.47■■□□□ 1.19
ITGA4-207ENST00000476089 PCYT2Q99447 389 aa22.47■■□□□ 1.19
ITGA4-207ENST00000476089 SLC5A4Q9NY91 659 aa22.47■■□□□ 1.19
ITGA4-207ENST00000476089 DIS3Q9Y2L1 958 aaKnown RBP22.47■■□□□ 1.19
ITGA4-207ENST00000476089 H0YCG3 227 aa22.46■■□□□ 1.19
ITGA4-207ENST00000476089 RNF225M0QZC1 329 aaPredicted RBP22.46■■□□□ 1.19
ITGA4-207ENST00000476089 ZBED6P86452 979 aa22.46■■□□□ 1.19
ITGA4-207ENST00000476089 KCNH2Q12809 1159 aa22.46■■□□□ 1.19
ITGA4-207ENST00000476089 EMC2Q15006 297 aa22.46■■□□□ 1.19
ITGA4-207ENST00000476089 TAF1CQ15572 869 aaPredicted RBP22.46■■□□□ 1.19
ITGA4-207ENST00000476089 SLC9A9Q8IVB4 645 aa22.46■■□□□ 1.19
ITGA4-207ENST00000476089 FAM186BQ8IYM0 893 aa22.46■■□□□ 1.19
ITGA4-207ENST00000476089 NTPCRQ9BSD7 190 aaKnown RBP22.46■■□□□ 1.19
ITGA4-207ENST00000476089 TTYH3Q9C0H2 523 aa22.46■■□□□ 1.19
ITGA4-207ENST00000476089 IKZF4Q9H2S9 585 aa22.46■■□□□ 1.19
ITGA4-207ENST00000476089 PDGFCQ9NRA1 345 aa22.46■■□□□ 1.19
ITGA4-207ENST00000476089 ZNHIT6Q9NWK9 470 aaKnown RBP22.46■■□□□ 1.19
ITGA4-207ENST00000476089 AFPP02771 609 aaKnown RBP22.45■■□□□ 1.19
ITGA4-207ENST00000476089 FECHP22830 423 aa22.45■■□□□ 1.19
ITGA4-207ENST00000476089 ABCD1P33897 745 aa22.45■■□□□ 1.19
ITGA4-207ENST00000476089 RFC5P40937 340 aa22.45■■□□□ 1.19
ITGA4-207ENST00000476089 CASP4P49662 377 aa22.45■■□□□ 1.19
ITGA4-207ENST00000476089 CYP2J2P51589 502 aa22.45■■□□□ 1.19
ITGA4-207ENST00000476089 INHBEP58166 350 aa22.45■■□□□ 1.19
ITGA4-207ENST00000476089 PTPN14Q15678 1187 aa22.45■■□□□ 1.19
ITGA4-207ENST00000476089 HSDL1Q3SXM5 330 aa22.45■■□□□ 1.19
ITGA4-207ENST00000476089 TCERG1LQ5VWI1 586 aa22.45■■□□□ 1.19
ITGA4-207ENST00000476089 NEK11Q8NG66 645 aa22.45■■□□□ 1.19
ITGA4-207ENST00000476089 DNAJC7Q99615 494 aa22.45■■□□□ 1.19
ITGA4-207ENST00000476089 POLR3FQ9H1D9 316 aaPredicted RBP22.45■■□□□ 1.19
ITGA4-207ENST00000476089 XPNPEP1Q9NQW7 623 aa22.45■■□□□ 1.19
ITGA4-207ENST00000476089 FAM207AQ9NSI2 230 aaPredicted RBP22.45■■□□□ 1.19
ITGA4-207ENST00000476089 DMAC2Q9NW81 257 aa22.45■■□□□ 1.19
ITGA4-207ENST00000476089 CPA4Q9UI42 421 aa22.45■■□□□ 1.19
ITGA4-207ENST00000476089 PPME1Q9Y570 386 aa22.45■■□□□ 1.19
ITGA4-207ENST00000476089 SLC15A5A6NIM6 579 aa22.45■■□□□ 1.18
ITGA4-207ENST00000476089 RASSF10A6NK89 507 aa22.45■■□□□ 1.18
ITGA4-207ENST00000476089 EXOC3O60645 756 aa22.45■■□□□ 1.18
ITGA4-207ENST00000476089 DCAF17Q5H9S7 520 aaPredicted RBP22.45■■□□□ 1.18
ITGA4-207ENST00000476089 TMEM161BQ8NDZ6 487 aa22.45■■□□□ 1.18
ITGA4-207ENST00000476089 PPP1R13BQ96KQ4 1090 aa22.45■■□□□ 1.18
ITGA4-207ENST00000476089 DHX33Q9H6R0 707 aaKnown RBP22.45■■□□□ 1.18
ITGA4-207ENST00000476089 AGPAT5Q9NUQ2 364 aa22.45■■□□□ 1.18
ITGA4-207ENST00000476089 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.45■■□□□ 1.18
ITGA4-207ENST00000476089 DENND3A2RUS2 1198 aa22.44■■□□□ 1.18
ITGA4-207ENST00000476089 SOWAHDA6NJG2 315 aa22.44■■□□□ 1.18
ITGA4-207ENST00000476089 IGF2BP3O00425 579 aaKnown RBP eCLIP22.44■■□□□ 1.18
ITGA4-207ENST00000476089 LGR5O75473 907 aa22.44■■□□□ 1.18
ITGA4-207ENST00000476089 SOX10P56693 466 aa22.44■■□□□ 1.18
ITGA4-207ENST00000476089 MAMDC4Q6UXC1 1216 aa22.44■■□□□ 1.18
ITGA4-207ENST00000476089 PLPPR4Q7Z2D5 763 aa22.44■■□□□ 1.18
ITGA4-207ENST00000476089 BBXQ8WY36 941 aaPredicted RBP22.44■■□□□ 1.18
ITGA4-207ENST00000476089 TBX20Q9UMR3 447 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms