RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 EYA4O95677 639 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 CD4P01730 458 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 PLA2G4BP0C869 781 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 ACRP10323 421 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 GAP43P17677 238 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 PLCG1P19174 1290 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 ZNF165P49910 485 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 NKX3-2P78367 333 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 GRIN1Q05586 938 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 TYRO3Q06418 890 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 SPIRE1Q08AE8 756 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 DHX8Q14562 1220 aaKnown RBP7.8□□□□□ -1.16
SHQ1-207ENST00000475558 HSP90AA2PQ14568 343 aaPredicted RBP7.8□□□□□ -1.16
SHQ1-207ENST00000475558 CCDC144BQ3MJ40 725 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 TMEM119Q4V9L6 283 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 COBLL1Q53SF7 1204 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 BRDTQ58F21 947 aaPredicted RBP7.8□□□□□ -1.16
SHQ1-207ENST00000475558 NCAPH2Q6IBW4 605 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 PDXDC2PQ6P474 469 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 FOXR2Q6PJQ5 311 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 SLC30A10Q6XR72 485 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 USP49Q70CQ1 688 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 CCDC65Q8IXS2 484 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 FAM126BQ8IXS8 530 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 CKAP2LQ8IYA6 745 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 RPUSD2Q8IZ73 545 aaKnown RBP7.8□□□□□ -1.16
SHQ1-207ENST00000475558 CYP2W1Q8TAV3 490 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 SEPT1Q8WYJ6 367 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 RAD54LQ92698 747 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 JPH2Q9BR39 696 aaPredicted RBP7.8□□□□□ -1.16
SHQ1-207ENST00000475558 MMTAG2Q9BU76 263 aaKnown RBP7.8□□□□□ -1.16
SHQ1-207ENST00000475558 SEZ6LQ9BYH1 1024 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 ADAM33Q9BZ11 813 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 NKX2-4Q9H2Z4 354 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 MLXIPQ9HAP2 919 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.8□□□□□ -1.16
SHQ1-207ENST00000475558 SLC9A2Q9UBY0 812 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 DBR1Q9UK59 544 aaKnown RBP7.8□□□□□ -1.16
SHQ1-207ENST00000475558 VAV3Q9UKW4 847 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 KIAA1024Q9UPX6 916 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 Q9Y3F1 56 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 ARIH1Q9Y4X5 557 aaPredicted RBP7.8□□□□□ -1.16
SHQ1-207ENST00000475558 SAMM50Q9Y512 469 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 MRVI1Q9Y6F6 885 aa7.8□□□□□ -1.16
SHQ1-207ENST00000475558 TCF20Q9UGU0 1960 aaKnown RBP7.79□□□□□ -1.16
SHQ1-207ENST00000475558 RBM47A0AV96 593 aaKnown RBP7.79□□□□□ -1.16
SHQ1-207ENST00000475558 BICDL2A1A5D9 508 aa7.79□□□□□ -1.16
SHQ1-207ENST00000475558 FSD2A1L4K1 749 aa7.79□□□□□ -1.16
SHQ1-207ENST00000475558 PPFIA4O75335 1185 aa7.79□□□□□ -1.16
SHQ1-207ENST00000475558 RHOBTB3O94955 611 aa7.79□□□□□ -1.16
SHQ1-207ENST00000475558 KRT18P05783 430 aaKnown RBP7.79□□□□□ -1.16
SHQ1-207ENST00000475558 BMP1P13497 986 aa7.79□□□□□ -1.16
SHQ1-207ENST00000475558 CDC25AP30304 524 aa7.79□□□□□ -1.16
SHQ1-207ENST00000475558 CYP2C18P33260 490 aa7.79□□□□□ -1.16
SHQ1-207ENST00000475558 AFMP43652 599 aa7.79□□□□□ -1.16
SHQ1-207ENST00000475558 CNTN2Q02246 1040 aa7.79□□□□□ -1.16
SHQ1-207ENST00000475558 DPYDQ12882 1025 aa7.79□□□□□ -1.16
SHQ1-207ENST00000475558 GRB10Q13322 594 aa7.79□□□□□ -1.16
SHQ1-207ENST00000475558 ZNF658Q5TYW1 1059 aaPredicted RBP7.79□□□□□ -1.16
SHQ1-207ENST00000475558 FAM160B1Q5W0V3 765 aa7.79□□□□□ -1.16
SHQ1-207ENST00000475558 METTL7BQ6UX53 244 aa7.79□□□□□ -1.16
SHQ1-207ENST00000475558 UNC13DQ70J99 1090 aa7.79□□□□□ -1.16
SHQ1-207ENST00000475558 TPH2Q8IWU9 490 aa7.79□□□□□ -1.16
SHQ1-207ENST00000475558 SLC43A3Q8NBI5 491 aa7.79□□□□□ -1.16
SHQ1-207ENST00000475558 DHTKD1Q96HY7 919 aaPredicted RBP7.79□□□□□ -1.16
SHQ1-207ENST00000475558 FAM167AQ96KS9 214 aa7.79□□□□□ -1.16
SHQ1-207ENST00000475558 FUCA2Q9BTY2 467 aa7.79□□□□□ -1.16
SHQ1-207ENST00000475558 HIPK3Q9H422 1215 aa7.79□□□□□ -1.16
SHQ1-207ENST00000475558 AZI2Q9H6S1 392 aa7.79□□□□□ -1.16
SHQ1-207ENST00000475558 C17orf75Q9HAS0 396 aa7.79□□□□□ -1.16
SHQ1-207ENST00000475558 JPH1Q9HDC5 661 aaPredicted RBP7.79□□□□□ -1.16
SHQ1-207ENST00000475558 SEL1LQ9UBV2 794 aa7.79□□□□□ -1.16
SHQ1-207ENST00000475558 DDX41Q9UJV9 622 aaKnown RBP7.79□□□□□ -1.16
SHQ1-207ENST00000475558 PCDHA11Q9Y5I1 949 aa7.79□□□□□ -1.16
SHQ1-207ENST00000475558 COL4A3BPQ9Y5P4 624 aa7.79□□□□□ -1.16
SHQ1-207ENST00000475558 MCM3APO60318 1980 aa7.79□□□□□ -1.16
SHQ1-207ENST00000475558 MYH4Q9Y623 1939 aa7.78□□□□□ -1.16
SHQ1-207ENST00000475558 H0YCG3 227 aa7.78□□□□□ -1.16
SHQ1-207ENST00000475558 ZEB2O60315 1214 aa7.78□□□□□ -1.16
SHQ1-207ENST00000475558 KPNA6O60684 536 aa7.78□□□□□ -1.16
SHQ1-207ENST00000475558 RPN1P04843 607 aaKnown RBP7.78□□□□□ -1.16
SHQ1-207ENST00000475558 SPATA31C1P0DKV0 1188 aa7.78□□□□□ -1.16
SHQ1-207ENST00000475558 MAPTP10636 758 aaKnown RBP7.78□□□□□ -1.16
SHQ1-207ENST00000475558 KCNA2P16389 499 aa7.78□□□□□ -1.16
SHQ1-207ENST00000475558 SNRPFP62306 86 aaKnown RBP7.78□□□□□ -1.16
SHQ1-207ENST00000475558 CDC42EP1Q00587 391 aa7.78□□□□□ -1.16
SHQ1-207ENST00000475558 TNFAIP2Q03169 654 aa7.78□□□□□ -1.16
SHQ1-207ENST00000475558 ALCAMQ13740 583 aa7.78□□□□□ -1.16
SHQ1-207ENST00000475558 MORC3Q14149 939 aa7.78□□□□□ -1.16
SHQ1-207ENST00000475558 NAALADL2Q58DX5 795 aa7.78□□□□□ -1.16
SHQ1-207ENST00000475558 XKR3Q5GH77 459 aa7.78□□□□□ -1.16
SHQ1-207ENST00000475558 CELF3Q5SZQ8 465 aaKnown RBP7.78□□□□□ -1.16
SHQ1-207ENST00000475558 PPP2R2DQ66LE6 453 aa7.78□□□□□ -1.16
SHQ1-207ENST00000475558 SEPT14Q6ZU15 432 aa7.78□□□□□ -1.16
SHQ1-207ENST00000475558 ARMCX2Q7L311 632 aa7.78□□□□□ -1.16
SHQ1-207ENST00000475558 OTOP2Q7RTS6 562 aa7.78□□□□□ -1.16
SHQ1-207ENST00000475558 PLPPR4Q7Z2D5 763 aa7.78□□□□□ -1.16
SHQ1-207ENST00000475558 DHX37Q8IY37 1157 aaKnown RBP7.78□□□□□ -1.16
SHQ1-207ENST00000475558 ANKRD20A12PQ8NF67 263 aa7.78□□□□□ -1.16
SHQ1-207ENST00000475558 ENOX1Q8TC92 643 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms