RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 MKRN4PQ13434 485 aaPredicted RBP19.21■□□□□ 0.67
CCM2-207ENST00000475551 CLUL1Q15846 466 aa19.21■□□□□ 0.67
CCM2-207ENST00000475551 AMIGO3Q86WK7 504 aa19.21■□□□□ 0.67
CCM2-207ENST00000475551 SAAL1Q96ER3 474 aa19.21■□□□□ 0.67
CCM2-207ENST00000475551 CAMKK2Q96RR4 588 aa19.21■□□□□ 0.67
CCM2-207ENST00000475551 IGF2BP3O00425 579 aaKnown RBP eCLIP19.2■□□□□ 0.66
CCM2-207ENST00000475551 KIAA0391O15091 583 aaKnown RBP19.2■□□□□ 0.66
CCM2-207ENST00000475551 GFPT2O94808 682 aa19.2■□□□□ 0.66
CCM2-207ENST00000475551 PLTPP55058 493 aa19.2■□□□□ 0.66
CCM2-207ENST00000475551 JAM2P57087 298 aa19.2■□□□□ 0.66
CCM2-207ENST00000475551 COPS2P61201 443 aa19.2■□□□□ 0.66
CCM2-207ENST00000475551 HYIQ5T013 277 aa19.2■□□□□ 0.66
CCM2-207ENST00000475551 ARHGEF3Q9NR81 526 aa19.2■□□□□ 0.66
CCM2-207ENST00000475551 MINPP1Q9UNW1 487 aa19.2■□□□□ 0.66
CCM2-207ENST00000475551 RPTORQ8N122 1335 aa19.2■□□□□ 0.66
CCM2-207ENST00000475551 hCG_1984214I3L0E3 225 aa19.2■□□□□ 0.66
CCM2-207ENST00000475551 GBP1P32455 592 aa19.2■□□□□ 0.66
CCM2-207ENST00000475551 RC3H1Q5TC82 1133 aaKnown RBP19.2■□□□□ 0.66
CCM2-207ENST00000475551 DCAF12L1Q5VU92 463 aa19.2■□□□□ 0.66
CCM2-207ENST00000475551 TAOK1Q7L7X3 1001 aa19.2■□□□□ 0.66
CCM2-207ENST00000475551 JAMLQ86YT9 394 aa19.2■□□□□ 0.66
CCM2-207ENST00000475551 ZNF713Q8N859 430 aaPredicted RBP19.2■□□□□ 0.66
CCM2-207ENST00000475551 FBXO25Q8TCJ0 367 aa19.2■□□□□ 0.66
CCM2-207ENST00000475551 IFT74Q96LB3 600 aa19.2■□□□□ 0.66
CCM2-207ENST00000475551 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.2■□□□□ 0.667e-6■□□□□ 10.1
CCM2-207ENST00000475551 RASAL2Q9UJF2 1139 aa19.2■□□□□ 0.66
CCM2-207ENST00000475551 NCANO14594 1321 aa19.2■□□□□ 0.66
CCM2-207ENST00000475551 BAG6P46379 1132 aa19.19■□□□□ 0.66
CCM2-207ENST00000475551 GALCP54803 685 aa19.19■□□□□ 0.66
CCM2-207ENST00000475551 PPATQ06203 517 aa19.19■□□□□ 0.66
CCM2-207ENST00000475551 KLHL29Q96CT2 875 aa19.19■□□□□ 0.66
CCM2-207ENST00000475551 ANKRD27Q96NW4 1050 aa19.19■□□□□ 0.66
CCM2-207ENST00000475551 NT5C3AQ9H0P0 336 aa19.19■□□□□ 0.66
CCM2-207ENST00000475551 SUN1O94901 812 aa19.19■□□□□ 0.66
CCM2-207ENST00000475551 NR2F2P24468 414 aa19.19■□□□□ 0.66
CCM2-207ENST00000475551 SARNPP82979 210 aaKnown RBP19.19■□□□□ 0.66
CCM2-207ENST00000475551 MAPK7Q13164 816 aa19.19■□□□□ 0.66
CCM2-207ENST00000475551 BLMHQ13867 455 aa19.19■□□□□ 0.66
CCM2-207ENST00000475551 PLS1Q14651 629 aa19.19■□□□□ 0.66
CCM2-207ENST00000475551 HERC4Q5GLZ8 1057 aaPredicted RBP19.19■□□□□ 0.66
CCM2-207ENST00000475551 PIGSQ96S52 555 aa19.19■□□□□ 0.66
CCM2-207ENST00000475551 PLCD4Q9BRC7 762 aa19.19■□□□□ 0.66
CCM2-207ENST00000475551 KIF9Q9HAQ2 790 aa19.19■□□□□ 0.66
CCM2-207ENST00000475551 ARMCX3Q9UH62 379 aaPredicted RBP19.19■□□□□ 0.66
CCM2-207ENST00000475551 SNX24Q9Y343 169 aa19.19■□□□□ 0.66
CCM2-207ENST00000475551 RGPD3A6NKT7 1758 aaPredicted RBP19.19■□□□□ 0.66
CCM2-207ENST00000475551 MAST2Q6P0Q8 1798 aa19.19■□□□□ 0.66
CCM2-207ENST00000475551 RGPD4Q7Z3J3 1758 aa19.19■□□□□ 0.66
CCM2-207ENST00000475551 O00370 1275 aa19.18■□□□□ 0.66
CCM2-207ENST00000475551 CAMTA2O94983 1202 aa19.18■□□□□ 0.66
CCM2-207ENST00000475551 IFNAR2P48551 515 aa19.18■□□□□ 0.66
CCM2-207ENST00000475551 MFSD5Q6N075 450 aa19.18■□□□□ 0.66
CCM2-207ENST00000475551 TBC1D16Q8TBP0 767 aa19.18■□□□□ 0.66
CCM2-207ENST00000475551 U2AF1L4Q8WU68 220 aaKnown RBP19.18■□□□□ 0.66
CCM2-207ENST00000475551 GLG1Q92896 1179 aa19.18■□□□□ 0.66
CCM2-207ENST00000475551 ERVK-5Q9HDB9 667 aa19.18■□□□□ 0.66
CCM2-207ENST00000475551 GRHL1Q9NZI5 618 aa19.18■□□□□ 0.66
CCM2-207ENST00000475551 NIP7Q9Y221 180 aaKnown RBP eCLIP19.18■□□□□ 0.66
CCM2-207ENST00000475551 KDM3AQ9Y4C1 1321 aa19.18■□□□□ 0.66
CCM2-207ENST00000475551 SMIM23A6NLE4 172 aa19.18■□□□□ 0.66
CCM2-207ENST00000475551 LUC7L3O95232 432 aaKnown RBP19.18■□□□□ 0.66
CCM2-207ENST00000475551 KRT16P08779 473 aa19.18■□□□□ 0.66
CCM2-207ENST00000475551 EPHA7Q15375 998 aa19.18■□□□□ 0.66
CCM2-207ENST00000475551 SLC30A5Q8TAD4 765 aa19.18■□□□□ 0.66
CCM2-207ENST00000475551 RFFLQ8WZ73 363 aa19.18■□□□□ 0.66
CCM2-207ENST00000475551 PRCCQ92733 491 aaPredicted RBP19.18■□□□□ 0.66
CCM2-207ENST00000475551 SH3GL3Q99963 347 aa19.18■□□□□ 0.66
CCM2-207ENST00000475551 SEMA4AQ9H3S1 761 aa19.18■□□□□ 0.66
CCM2-207ENST00000475551 SIX2Q9NPC8 291 aa19.18■□□□□ 0.66
CCM2-207ENST00000475551 PARP2Q9UGN5 583 aa19.18■□□□□ 0.66
CCM2-207ENST00000475551 PPP1R9AQ9ULJ8 1098 aa19.18■□□□□ 0.66
CCM2-207ENST00000475551 RPS6KA4O75676 772 aa19.17■□□□□ 0.66
CCM2-207ENST00000475551 FERP16591 822 aa19.17■□□□□ 0.66
CCM2-207ENST00000475551 MSH2P43246 934 aa19.17■□□□□ 0.66
CCM2-207ENST00000475551 AUHQ13825 339 aaKnown RBP19.17■□□□□ 0.66
CCM2-207ENST00000475551 USP17L2Q6R6M4 530 aa19.17■□□□□ 0.66
CCM2-207ENST00000475551 ASRGL1Q7L266 308 aa19.17■□□□□ 0.66
CCM2-207ENST00000475551 ERICH1Q86X53 443 aa19.17■□□□□ 0.66
CCM2-207ENST00000475551 SLC35G2Q8TBE7 412 aa19.17■□□□□ 0.66
CCM2-207ENST00000475551 MICAL1Q8TDZ2 1067 aa19.17■□□□□ 0.66
CCM2-207ENST00000475551 OSGEPQ9NPF4 335 aa19.17■□□□□ 0.66
CCM2-207ENST00000475551 MTRF1LQ9UGC7 380 aaKnown RBP19.17■□□□□ 0.66
CCM2-207ENST00000475551 TRAF3IP3Q9Y228 551 aa19.17■□□□□ 0.66
CCM2-207ENST00000475551 CD2APQ9Y5K6 639 aa19.17■□□□□ 0.66
CCM2-207ENST00000475551 RASGRF2O14827 1237 aa19.17■□□□□ 0.66
CCM2-207ENST00000475551 WFS1O76024 890 aa19.17■□□□□ 0.66
CCM2-207ENST00000475551 GJB6O95452 261 aa19.17■□□□□ 0.66
CCM2-207ENST00000475551 TMEM253P0C7T8 217 aa19.17■□□□□ 0.66
CCM2-207ENST00000475551 RASA1P20936 1047 aa19.17■□□□□ 0.66
CCM2-207ENST00000475551 PRPF4BQ13523 1007 aaKnown RBP19.17■□□□□ 0.66
CCM2-207ENST00000475551 ILDR2Q71H61 639 aa19.17■□□□□ 0.66
CCM2-207ENST00000475551 EPS8L3Q8TE67 593 aaKnown RBP19.17■□□□□ 0.66
CCM2-207ENST00000475551 RTCBQ9Y3I0 505 aaKnown RBP19.17■□□□□ 0.66
CCM2-207ENST00000475551 ATP2A2P16615 1042 aaKnown RBP19.16■□□□□ 0.66
CCM2-207ENST00000475551 PTGIRP43119 386 aa19.16■□□□□ 0.66
CCM2-207ENST00000475551 ANKRD20A2Q5SQ80 823 aa19.16■□□□□ 0.66
CCM2-207ENST00000475551 ANKRD20A1Q5TYW2 823 aa19.16■□□□□ 0.66
CCM2-207ENST00000475551 ANKRD20A3Q5VUR7 823 aa19.16■□□□□ 0.66
CCM2-207ENST00000475551 SPICE1Q8N0Z3 855 aa19.16■□□□□ 0.66
CCM2-207ENST00000475551 ROPN1BQ9BZX4 212 aaPredicted RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms