RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 MICAL3Q7RTP6 2002 aa7.93□□□□□ -1.14
HDAC3-207ENST00000475549 SIP14410 1827 aa7.92□□□□□ -1.14
HDAC3-207ENST00000475549 FSCN2O14926 492 aa7.92□□□□□ -1.14
HDAC3-207ENST00000475549 FGF18O76093 207 aa7.92□□□□□ -1.14
HDAC3-207ENST00000475549 EYA4O95677 639 aa7.92□□□□□ -1.14
HDAC3-207ENST00000475549 FDPSP14324 419 aaKnown RBP7.92□□□□□ -1.14
HDAC3-207ENST00000475549 DARSP14868 501 aaKnown RBP7.92□□□□□ -1.14
HDAC3-207ENST00000475549 SFNP31947 248 aa7.92□□□□□ -1.14
HDAC3-207ENST00000475549 SSTR3P32745 418 aaPredicted RBP7.92□□□□□ -1.14
HDAC3-207ENST00000475549 PBX3P40426 434 aa7.92□□□□□ -1.14
HDAC3-207ENST00000475549 NRIP1P48552 1158 aa7.92□□□□□ -1.14
HDAC3-207ENST00000475549 GPC3P51654 580 aa7.92□□□□□ -1.14
HDAC3-207ENST00000475549 JAK3P52333 1124 aa7.92□□□□□ -1.14
HDAC3-207ENST00000475549 INF2Q27J81 1249 aa7.92□□□□□ -1.14
HDAC3-207ENST00000475549 FAM43BQ6ZT52 329 aaPredicted RBP7.92□□□□□ -1.14
HDAC3-207ENST00000475549 ANO5Q75V66 913 aa7.92□□□□□ -1.14
HDAC3-207ENST00000475549 ZNF598Q86UK7 904 aaKnown RBP7.92□□□□□ -1.14
HDAC3-207ENST00000475549 ADHFE1Q8IWW8 467 aa7.92□□□□□ -1.14
HDAC3-207ENST00000475549 EFHBQ8N7U6 833 aa7.92□□□□□ -1.14
HDAC3-207ENST00000475549 ZNF579Q8NAF0 562 aaKnown RBP7.92□□□□□ -1.14
HDAC3-207ENST00000475549 HAS1Q92839 578 aa7.92□□□□□ -1.14
HDAC3-207ENST00000475549 PHF20Q9BVI0 1012 aa7.92□□□□□ -1.14
HDAC3-207ENST00000475549 TEKT3Q9BXF9 490 aa7.92□□□□□ -1.14
HDAC3-207ENST00000475549 ELAC1Q9H777 363 aaKnown RBP7.92□□□□□ -1.14
HDAC3-207ENST00000475549 NRBP2Q9NSY0 501 aa7.92□□□□□ -1.14
HDAC3-207ENST00000475549 TMEM161AQ9NX61 479 aa7.92□□□□□ -1.14
HDAC3-207ENST00000475549 VAV3Q9UKW4 847 aa7.92□□□□□ -1.14
HDAC3-207ENST00000475549 AKT3Q9Y243 479 aa7.92□□□□□ -1.14
HDAC3-207ENST00000475549 TTC3P53804 2025 aa7.91□□□□□ -1.14
HDAC3-207ENST00000475549 A0A0U1RQF3 1178 aa7.91□□□□□ -1.14
HDAC3-207ENST00000475549 FAM205CA6NFA0 338 aa7.91□□□□□ -1.14
HDAC3-207ENST00000475549 HIDE1A8MVS5 230 aa7.91□□□□□ -1.14
HDAC3-207ENST00000475549 CPLX1O14810 134 aa7.91□□□□□ -1.14
HDAC3-207ENST00000475549 ZBTB39O15060 712 aa7.91□□□□□ -1.14
HDAC3-207ENST00000475549 PFKFB2O60825 505 aa7.91□□□□□ -1.14
HDAC3-207ENST00000475549 ATF7P17544 494 aaPredicted RBP7.91□□□□□ -1.14
HDAC3-207ENST00000475549 COASYQ13057 564 aa7.91□□□□□ -1.14
HDAC3-207ENST00000475549 KCNC3Q14003 757 aa7.91□□□□□ -1.14
HDAC3-207ENST00000475549 MTERF2Q49AM1 385 aa7.91□□□□□ -1.14
HDAC3-207ENST00000475549 XKR3Q5GH77 459 aa7.91□□□□□ -1.14
HDAC3-207ENST00000475549 CLLU1OSQ5K130 101 aa7.91□□□□□ -1.14
HDAC3-207ENST00000475549 MIER3Q7Z3K6 550 aa7.91□□□□□ -1.14
HDAC3-207ENST00000475549 ECHDC2Q86YB7 292 aa7.91□□□□□ -1.14
HDAC3-207ENST00000475549 KSR1Q8IVT5 923 aa7.91□□□□□ -1.14
HDAC3-207ENST00000475549 TRIM22Q8IYM9 498 aa7.91□□□□□ -1.14
HDAC3-207ENST00000475549 COLGALT1Q8NBJ5 622 aa7.91□□□□□ -1.14
HDAC3-207ENST00000475549 MICAL1Q8TDZ2 1067 aa7.91□□□□□ -1.14
HDAC3-207ENST00000475549 FAM167AQ96KS9 214 aa7.91□□□□□ -1.14
HDAC3-207ENST00000475549 MAP7D2Q96T17 732 aa7.91□□□□□ -1.14
HDAC3-207ENST00000475549 TMEM117Q9H0C3 514 aa7.91□□□□□ -1.14
HDAC3-207ENST00000475549 ATP6V0A4Q9HBG4 840 aa7.91□□□□□ -1.14
HDAC3-207ENST00000475549 KCNMB3Q9NPA1 279 aa7.91□□□□□ -1.14
HDAC3-207ENST00000475549 PRKAG3Q9UGI9 489 aa7.91□□□□□ -1.14
HDAC3-207ENST00000475549 CD207Q9UJ71 328 aa7.91□□□□□ -1.14
HDAC3-207ENST00000475549 BARX2Q9UMQ3 279 aaPredicted RBP7.91□□□□□ -1.14
HDAC3-207ENST00000475549 MYO7AQ13402 2215 aa7.91□□□□□ -1.14
HDAC3-207ENST00000475549 WDFY4Q6ZS81 3184 aa7.91□□□□□ -1.14
HDAC3-207ENST00000475549 A0A087WZ62 844 aa7.9□□□□□ -1.14
HDAC3-207ENST00000475549 MEIS3P2A8K0S8 358 aa7.9□□□□□ -1.14
HDAC3-207ENST00000475549 DDX11L8A8MPP1 907 aa7.9□□□□□ -1.14
HDAC3-207ENST00000475549 PRR33A8MZF0 331 aa7.9□□□□□ -1.14
HDAC3-207ENST00000475549 MAFO75444 373 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-207ENST00000475549 TMOD1P28289 359 aa7.9□□□□□ -1.14
HDAC3-207ENST00000475549 PLA2G5P39877 138 aa7.9□□□□□ -1.14
HDAC3-207ENST00000475549 AK2P54819 239 aa7.9□□□□□ -1.14
HDAC3-207ENST00000475549 NPEPPSP55786 919 aa7.9□□□□□ -1.14
HDAC3-207ENST00000475549 PLCB3Q01970 1234 aa7.9□□□□□ -1.14
HDAC3-207ENST00000475549 UBE3AQ05086 875 aa7.9□□□□□ -1.14
HDAC3-207ENST00000475549 SPIRE1Q08AE8 756 aa7.9□□□□□ -1.14
HDAC3-207ENST00000475549 TBC1D8BQ0IIM8 1120 aa7.9□□□□□ -1.14
HDAC3-207ENST00000475549 SMAD4Q13485 552 aaKnown RBP7.9□□□□□ -1.14
HDAC3-207ENST00000475549 NONOQ15233 471 aaKnown RBP eCLIP7.9□□□□□ -1.14
HDAC3-207ENST00000475549 DUSP6Q16828 381 aa7.9□□□□□ -1.14
HDAC3-207ENST00000475549 LETM2Q2VYF4 491 aa7.9□□□□□ -1.14
HDAC3-207ENST00000475549 ODR4Q5SWX8 454 aa7.9□□□□□ -1.14
HDAC3-207ENST00000475549 PLA2G4FQ68DD2 849 aa7.9□□□□□ -1.14
HDAC3-207ENST00000475549 PPP4R3AQ6IN85 833 aa7.9□□□□□ -1.14
HDAC3-207ENST00000475549 GALNT17Q6IS24 598 aa7.9□□□□□ -1.14
HDAC3-207ENST00000475549 KCNT2Q6UVM3 1135 aa7.9□□□□□ -1.14
HDAC3-207ENST00000475549 MOXD1Q6UVY6 613 aa7.9□□□□□ -1.14
HDAC3-207ENST00000475549 KRT25Q7Z3Z0 450 aa7.9□□□□□ -1.14
HDAC3-207ENST00000475549 TMEM173Q86WV6 379 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-207ENST00000475549 SMRP1Q8NCR6 262 aa7.9□□□□□ -1.14
HDAC3-207ENST00000475549 RDM1Q8NG50 284 aa7.9□□□□□ -1.14
HDAC3-207ENST00000475549 TNFRSF25Q93038 417 aa7.9□□□□□ -1.14
HDAC3-207ENST00000475549 FDXACB1Q9BRP7 624 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-207ENST00000475549 C22orf23Q9BZE7 217 aa7.9□□□□□ -1.14
HDAC3-207ENST00000475549 S1PR5Q9H228 398 aa7.9□□□□□ -1.14
HDAC3-207ENST00000475549 TLE6Q9H808 572 aa7.9□□□□□ -1.14
HDAC3-207ENST00000475549 IFT122Q9HBG6 1241 aa7.9□□□□□ -1.14
HDAC3-207ENST00000475549 TLR9Q9NR96 1032 aa7.9□□□□□ -1.14
HDAC3-207ENST00000475549 SUCLA2Q9P2R7 463 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-207ENST00000475549 SEPT9Q9UHD8 586 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-207ENST00000475549 DDX25Q9UHL0 483 aaKnown RBP7.9□□□□□ -1.14
HDAC3-207ENST00000475549 MUTYHQ9UIF7 546 aa7.9□□□□□ -1.14
HDAC3-207ENST00000475549 PCDHB12Q9Y5F1 795 aa7.9□□□□□ -1.14
HDAC3-207ENST00000475549 WNT7AO00755 349 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 DCXO43602 365 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 B4GALT3O60512 393 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 LARGE1O95461 756 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms