RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 ARHGAP6O43182 974 aa9.02□□□□□ -0.97
SMC5-203ENST00000475540 TERF2Q15554 542 aa9.02□□□□□ -0.97
SMC5-203ENST00000475540 DDB1Q16531 1140 aa9.02□□□□□ -0.97
SMC5-203ENST00000475540 KIAA1841Q6NSI8 718 aa9.02□□□□□ -0.97
SMC5-203ENST00000475540 KLHDC10Q6PID8 442 aa9.02□□□□□ -0.97
SMC5-203ENST00000475540 KANSL1Q7Z3B3 1105 aa9.02□□□□□ -0.97
SMC5-203ENST00000475540 BCL6BQ8N143 479 aaPredicted RBP9.02□□□□□ -0.97
SMC5-203ENST00000475540 OR5AN1Q8NGI8 311 aa9.02□□□□□ -0.97
SMC5-203ENST00000475540 ZNF496Q96IT1 587 aaPredicted RBP9.02□□□□□ -0.97
SMC5-203ENST00000475540 SAMD11Q96NU1 681 aa9.02□□□□□ -0.97
SMC5-203ENST00000475540 LRRC37BQ96QE4 947 aa9.02□□□□□ -0.97
SMC5-203ENST00000475540 SSBP3Q9BWW4 388 aaPredicted RBP9.02□□□□□ -0.97
SMC5-203ENST00000475540 KCNG1Q9UIX4 513 aa9.02□□□□□ -0.97
SMC5-203ENST00000475540 DENND2AQ9ULE3 1009 aa9.02□□□□□ -0.97
SMC5-203ENST00000475540 NCANO14594 1321 aa9.02□□□□□ -0.97
SMC5-203ENST00000475540 H2AFYO75367 372 aaKnown RBP9.01□□□□□ -0.97
SMC5-203ENST00000475540 BPIP17213 487 aa9.01□□□□□ -0.97
SMC5-203ENST00000475540 ANTXR2P58335 489 aa9.01□□□□□ -0.97
SMC5-203ENST00000475540 NFYCQ13952 458 aa9.01□□□□□ -0.97
SMC5-203ENST00000475540 TBR1Q16650 682 aa9.01□□□□□ -0.97
SMC5-203ENST00000475540 BROXQ5VW32 411 aa9.01□□□□□ -0.97
SMC5-203ENST00000475540 BMP8AQ7Z5Y6 402 aa9.01□□□□□ -0.97
SMC5-203ENST00000475540 CHST13Q8NET6 341 aa9.01□□□□□ -0.97
SMC5-203ENST00000475540 GFM2Q969S9 779 aaKnown RBP9.01□□□□□ -0.97
SMC5-203ENST00000475540 C12orf65Q9H3J6 166 aaKnown RBP9.01□□□□□ -0.97
SMC5-203ENST00000475540 PUF60Q9UHX1 559 aaKnown RBP9.01□□□□□ -0.97
SMC5-203ENST00000475540 CPEP16870 476 aa9□□□□□ -0.97
SMC5-203ENST00000475540 SPATS1Q496A3 300 aa9□□□□□ -0.97
SMC5-203ENST00000475540 FRMD7Q6ZUT3 714 aa9□□□□□ -0.97
SMC5-203ENST00000475540 PRRT2Q7Z6L0 340 aaPredicted RBP9□□□□□ -0.97
SMC5-203ENST00000475540 TAX1BP1Q86VP1 789 aa9□□□□□ -0.97
SMC5-203ENST00000475540 GIMAP8Q8ND71 665 aaPredicted RBP9□□□□□ -0.97
SMC5-203ENST00000475540 SLC5A5Q92911 643 aa9□□□□□ -0.97
SMC5-203ENST00000475540 DYDC2Q96IM9 177 aa9□□□□□ -0.97
SMC5-203ENST00000475540 MEGF9Q9H1U4 602 aa9□□□□□ -0.97
SMC5-203ENST00000475540 NOC2LQ9Y3T9 749 aaKnown RBP9□□□□□ -0.97
SMC5-203ENST00000475540 NEMP1O14524 444 aa8.99□□□□□ -0.97
SMC5-203ENST00000475540 GPR42O15529 346 aa8.99□□□□□ -0.97
SMC5-203ENST00000475540 CR2P20023 1033 aa8.99□□□□□ -0.97
SMC5-203ENST00000475540 CNGA1P29973 690 aa8.99□□□□□ -0.97
SMC5-203ENST00000475540 ADAM15Q13444 863 aa8.99□□□□□ -0.97
SMC5-203ENST00000475540 UNQ6494/PRO21346Q6UXR6 183 aa8.99□□□□□ -0.97
SMC5-203ENST00000475540 KRT26Q7Z3Y9 468 aa8.99□□□□□ -0.97
SMC5-203ENST00000475540 STRA8Q7Z7C7 330 aa8.99□□□□□ -0.97
SMC5-203ENST00000475540 LPPQ93052 612 aa8.99□□□□□ -0.97
SMC5-203ENST00000475540 FERMT2Q96AC1 680 aa8.99□□□□□ -0.97
SMC5-203ENST00000475540 SEMA4AQ9H3S1 761 aa8.99□□□□□ -0.97
SMC5-203ENST00000475540 MTG2Q9H4K7 406 aa8.99□□□□□ -0.97
SMC5-203ENST00000475540 SMPD4Q9NXE4 827 aa8.99□□□□□ -0.97
SMC5-203ENST00000475540 CADPSQ9ULU8 1353 aa8.99□□□□□ -0.97
SMC5-203ENST00000475540 A0A0A6YYJ9 748 aa8.98□□□□□ -0.97
SMC5-203ENST00000475540 ST20-MTHFSA0A0A6YYL1 179 aa8.98□□□□□ -0.97
SMC5-203ENST00000475540 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.98□□□□□ -0.97
SMC5-203ENST00000475540 ELL2O00472 640 aaPredicted RBP8.98□□□□□ -0.97
SMC5-203ENST00000475540 BRINP1O60477 761 aa8.98□□□□□ -0.97
SMC5-203ENST00000475540 ULK1O75385 1050 aa8.98□□□□□ -0.97
SMC5-203ENST00000475540 RASSF3Q86WH2 238 aa8.98□□□□□ -0.97
SMC5-203ENST00000475540 WDR92Q96MX6 357 aa8.98□□□□□ -0.97
SMC5-203ENST00000475540 GNRHR2Q96P88 292 aa8.98□□□□□ -0.97
SMC5-203ENST00000475540 NOL10Q9BSC4 688 aaKnown RBP8.98□□□□□ -0.97
SMC5-203ENST00000475540 PITHD1Q9GZP4 211 aaPredicted RBP8.98□□□□□ -0.97
SMC5-203ENST00000475540 POLR3BQ9NW08 1133 aaPredicted RBP8.98□□□□□ -0.97
SMC5-203ENST00000475540 OAZ3Q9UMX2 235 aa8.98□□□□□ -0.97
SMC5-203ENST00000475540 MYPNQ86TC9 1320 aa8.98□□□□□ -0.97
SMC5-203ENST00000475540 DAPK3O43293 454 aa8.97□□□□□ -0.97
SMC5-203ENST00000475540 CDC14BO60729 498 aa8.97□□□□□ -0.97
SMC5-203ENST00000475540 ID4P47928 161 aa8.97□□□□□ -0.97
SMC5-203ENST00000475540 EFEMP1Q12805 493 aa8.97□□□□□ -0.97
SMC5-203ENST00000475540 TTC9BQ8N6N2 239 aa8.97□□□□□ -0.97
SMC5-203ENST00000475540 OR14K1Q8NGZ2 314 aa8.97□□□□□ -0.97
SMC5-203ENST00000475540 GCDHQ92947 438 aaPredicted RBP8.97□□□□□ -0.97
SMC5-203ENST00000475540 HIST1H2AHQ96KK5 128 aa8.97□□□□□ -0.97
SMC5-203ENST00000475540 HIST1H2AJQ99878 128 aa8.97□□□□□ -0.97
SMC5-203ENST00000475540 APOBEC2Q9Y235 224 aaKnown RBP8.97□□□□□ -0.97
SMC5-203ENST00000475540 CTDP1Q9Y5B0 961 aaPredicted RBP8.97□□□□□ -0.97
SMC5-203ENST00000475540 OPHN1O60890 802 aa8.96□□□□□ -0.98
SMC5-203ENST00000475540 PCDH8O95206 1070 aa8.96□□□□□ -0.98
SMC5-203ENST00000475540 VIL1P09327 827 aaKnown RBP8.96□□□□□ -0.98
SMC5-203ENST00000475540 MAGEA10P43363 369 aaPredicted RBP8.96□□□□□ -0.98
SMC5-203ENST00000475540 NKD2Q969F2 451 aaPredicted RBP8.96□□□□□ -0.98
SMC5-203ENST00000475540 DPYSL5Q9BPU6 564 aa8.96□□□□□ -0.98
SMC5-203ENST00000475540 DNAI1Q9UI46 699 aa8.96□□□□□ -0.98
SMC5-203ENST00000475540 LCHNA4D1U4 455 aa8.95□□□□□ -0.98
SMC5-203ENST00000475540 KDM1AO60341 852 aa8.95□□□□□ -0.98
SMC5-203ENST00000475540 BUD31P41223 144 aaPredicted RBP8.95□□□□□ -0.98
SMC5-203ENST00000475540 SESN3P58005 492 aa8.95□□□□□ -0.98
SMC5-203ENST00000475540 NFKB2Q00653 900 aa8.95□□□□□ -0.98
SMC5-203ENST00000475540 MAN2A1Q16706 1144 aa8.95□□□□□ -0.98
SMC5-203ENST00000475540 TCTN3Q6NUS6 607 aa8.95□□□□□ -0.98
SMC5-203ENST00000475540 HDGFL2Q7Z4V5 671 aaPredicted RBP8.95□□□□□ -0.98
SMC5-203ENST00000475540 AFAP1L2Q8N4X5 818 aa8.95□□□□□ -0.98
SMC5-203ENST00000475540 ANO3Q9BYT9 981 aa8.95□□□□□ -0.98
SMC5-203ENST00000475540 HAPLN2Q9GZV7 340 aa8.95□□□□□ -0.98
SMC5-203ENST00000475540 MS4A5Q9H3V2 200 aa8.95□□□□□ -0.98
SMC5-203ENST00000475540 DEF6Q9H4E7 631 aa8.95□□□□□ -0.98
SMC5-203ENST00000475540 MSL2Q9HCI7 577 aa8.95□□□□□ -0.98
SMC5-203ENST00000475540 ST6GALNAC2Q9UJ37 374 aa8.95□□□□□ -0.98
SMC5-203ENST00000475540 PATE3B3GLJ2 98 aa8.94□□□□□ -0.98
SMC5-203ENST00000475540 MATN2O00339 956 aa8.94□□□□□ -0.98
SMC5-203ENST00000475540 ATP2C1P98194 919 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms