RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 GOLGA8BA8MQT2 603 aa23.18■■□□□ 1.3
VPS36-203ENST00000475375 MAGEB2O15479 319 aa23.18■■□□□ 1.3
VPS36-203ENST00000475375 TMOD1P28289 359 aa23.18■■□□□ 1.3
VPS36-203ENST00000475375 FUT2Q10981 343 aa23.18■■□□□ 1.3
VPS36-203ENST00000475375 NECTIN1Q15223 517 aa23.18■■□□□ 1.3
VPS36-203ENST00000475375 ZNF746Q6NUN9 644 aaPredicted RBP23.18■■□□□ 1.3
VPS36-203ENST00000475375 EFCAB12Q6NXP0 572 aa23.18■■□□□ 1.3
VPS36-203ENST00000475375 ECHDC2Q86YB7 292 aa23.18■■□□□ 1.3
VPS36-203ENST00000475375 SMAP1Q8IYB5 467 aaPredicted RBP23.18■■□□□ 1.3
VPS36-203ENST00000475375 UBALD2Q8IYN6 164 aa23.18■■□□□ 1.3
VPS36-203ENST00000475375 LRRC71Q8N4P6 559 aa23.18■■□□□ 1.3
VPS36-203ENST00000475375 TMEM87AQ8NBN3 555 aa23.18■■□□□ 1.3
VPS36-203ENST00000475375 TCEANC2Q96MN5 208 aa23.18■■□□□ 1.3
VPS36-203ENST00000475375 NECTIN4Q96NY8 510 aa23.18■■□□□ 1.3
VPS36-203ENST00000475375 POMKQ9H5K3 350 aa23.18■■□□□ 1.3
VPS36-203ENST00000475375 GABBR1Q9UBS5 961 aa23.18■■□□□ 1.3
VPS36-203ENST00000475375 NAP1L2Q9ULW6 460 aaPredicted RBP23.18■■□□□ 1.3
VPS36-203ENST00000475375 SORCS3Q9UPU3 1222 aa23.18■■□□□ 1.3
VPS36-203ENST00000475375 HCFC2Q9Y5Z7 792 aa23.18■■□□□ 1.3
VPS36-203ENST00000475375 IGLV3-22A0A075B6J6 115 aa23.17■■□□□ 1.3
VPS36-203ENST00000475375 C2CD4DB7Z1M9 353 aa23.17■■□□□ 1.3
VPS36-203ENST00000475375 GALR2O43603 387 aaPredicted RBP23.17■■□□□ 1.3
VPS36-203ENST00000475375 SETQ01105 290 aaPredicted RBP23.17■■□□□ 1.3
VPS36-203ENST00000475375 ITIH3Q06033 890 aa23.17■■□□□ 1.3
VPS36-203ENST00000475375 BMS1Q14692 1282 aaKnown RBP23.17■■□□□ 1.3
VPS36-203ENST00000475375 RNF20Q5VTR2 975 aa23.17■■□□□ 1.3
VPS36-203ENST00000475375 MRPL43Q8N983 215 aaKnown RBP23.17■■□□□ 1.3
VPS36-203ENST00000475375 ADAM7Q9H2U9 754 aa23.17■■□□□ 1.3
VPS36-203ENST00000475375 BRPF3Q9ULD4 1205 aa23.17■■□□□ 1.3
VPS36-203ENST00000475375 PCDHA10Q9Y5I2 948 aa23.17■■□□□ 1.3
VPS36-203ENST00000475375 C2orf71A6NGG8 1288 aa23.16■■□□□ 1.3
VPS36-203ENST00000475375 BRD1O95696 1058 aa23.16■■□□□ 1.3
VPS36-203ENST00000475375 EIF4BP23588 611 aaKnown RBP23.16■■□□□ 1.3
VPS36-203ENST00000475375 NUBP1P53384 320 aa23.16■■□□□ 1.3
VPS36-203ENST00000475375 CLLU1OSQ5K130 101 aa23.16■■□□□ 1.3
VPS36-203ENST00000475375 HELQQ8TDG4 1101 aa23.16■■□□□ 1.3
VPS36-203ENST00000475375 FAM167AQ96KS9 214 aa23.16■■□□□ 1.3
VPS36-203ENST00000475375 ADAMTS10Q9H324 1103 aa23.16■■□□□ 1.3
VPS36-203ENST00000475375 CYP3A4P08684 503 aa23.15■■□□□ 1.3
VPS36-203ENST00000475375 WEE2P0C1S8 567 aa23.15■■□□□ 1.3
VPS36-203ENST00000475375 MTHFRP42898 656 aa23.15■■□□□ 1.3
VPS36-203ENST00000475375 METAP2P50579 478 aaKnown RBP eCLIP23.15■■□□□ 1.3
VPS36-203ENST00000475375 PRR16Q569H4 304 aa23.15■■□□□ 1.3
VPS36-203ENST00000475375 RARS2Q5T160 578 aaKnown RBP23.15■■□□□ 1.3
VPS36-203ENST00000475375 SLC39A11Q8N1S5 342 aa23.15■■□□□ 1.3
VPS36-203ENST00000475375 KLF18A0A0U1RQI7 1052 aa23.14■■□□□ 1.29
VPS36-203ENST00000475375 NT5C1B-RDH14C9J2C7 533 aa23.14■■□□□ 1.29
VPS36-203ENST00000475375 CLASP2O75122 1294 aaKnown RBP23.14■■□□□ 1.29
VPS36-203ENST00000475375 CXCL14O95715 111 aa23.14■■□□□ 1.29
VPS36-203ENST00000475375 ALDH7A1P49419 539 aaKnown RBP23.14■■□□□ 1.29
VPS36-203ENST00000475375 TMEM169Q96HH4 297 aa23.14■■□□□ 1.29
VPS36-203ENST00000475375 MRPL9Q9BYD2 267 aaKnown RBP23.14■■□□□ 1.29
VPS36-203ENST00000475375 MFSD1Q9H3U5 465 aa23.14■■□□□ 1.29
VPS36-203ENST00000475375 SMOC2Q9H3U7 446 aa23.14■■□□□ 1.29
VPS36-203ENST00000475375 ASGR2P07307 311 aa23.13■■□□□ 1.29
VPS36-203ENST00000475375 FGFR4P22455 802 aa23.13■■□□□ 1.29
VPS36-203ENST00000475375 REXO1Q8N1G1 1221 aaKnown RBP23.13■■□□□ 1.29
VPS36-203ENST00000475375 ZNF710Q8N1W2 664 aa23.13■■□□□ 1.29
VPS36-203ENST00000475375 C12orf76Q8N812 135 aaPredicted RBP23.13■■□□□ 1.29
VPS36-203ENST00000475375 TDRD5Q8NAT2 981 aaKnown RBP23.13■■□□□ 1.29
VPS36-203ENST00000475375 NLRP7Q8WX94 980 aa23.13■■□□□ 1.29
VPS36-203ENST00000475375 CRYGNQ8WXF5 182 aa23.13■■□□□ 1.29
VPS36-203ENST00000475375 C6orf50Q9HD87 102 aa23.13■■□□□ 1.29
VPS36-203ENST00000475375 NRBP2Q9NSY0 501 aa23.13■■□□□ 1.29
VPS36-203ENST00000475375 MYO15AQ9UKN7 3530 aa23.13■■□□□ 1.29
VPS36-203ENST00000475375 PTPRZ1P23471 2315 aaPredicted RBP23.13■■□□□ 1.29
VPS36-203ENST00000475375 MYH9P35579 1960 aaKnown RBP23.12■■□□□ 1.29
VPS36-203ENST00000475375 A0A0U1RQF3 1178 aa23.12■■□□□ 1.29
VPS36-203ENST00000475375 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.12■■□□□ 1.29
VPS36-203ENST00000475375 WDR64B1ANS9 1081 aa23.12■■□□□ 1.29
VPS36-203ENST00000475375 EOMESO95936 686 aa23.12■■□□□ 1.29
VPS36-203ENST00000475375 DARSP14868 501 aaKnown RBP23.12■■□□□ 1.29
VPS36-203ENST00000475375 CDC27P30260 824 aa23.12■■□□□ 1.29
VPS36-203ENST00000475375 BCAR1P56945 870 aa23.12■■□□□ 1.29
VPS36-203ENST00000475375 PFKFB3Q16875 520 aaPredicted RBP23.12■■□□□ 1.29
VPS36-203ENST00000475375 MCTP2Q6DN12 878 aa23.12■■□□□ 1.29
VPS36-203ENST00000475375 DHX32Q7L7V1 743 aaKnown RBP23.12■■□□□ 1.29
VPS36-203ENST00000475375 VPS52Q8N1B4 723 aa23.12■■□□□ 1.29
VPS36-203ENST00000475375 TMEM105Q8N8V8 129 aa23.12■■□□□ 1.29
VPS36-203ENST00000475375 DACT1Q9NYF0 836 aa23.12■■□□□ 1.29
VPS36-203ENST00000475375 LIMD1Q9UGP4 676 aa23.12■■□□□ 1.29
VPS36-203ENST00000475375 DBR1Q9UK59 544 aaKnown RBP23.12■■□□□ 1.29
VPS36-203ENST00000475375 ZC3H11AO75152 810 aaKnown RBP eCLIP23.11■■□□□ 1.29
VPS36-203ENST00000475375 OATP04181 439 aa23.11■■□□□ 1.29
VPS36-203ENST00000475375 GPC3P51654 580 aa23.11■■□□□ 1.29
VPS36-203ENST00000475375 FGD1P98174 961 aa23.11■■□□□ 1.29
VPS36-203ENST00000475375 EXOSC10Q01780 885 aaKnown RBP23.11■■□□□ 1.29
VPS36-203ENST00000475375 PRKCEQ02156 737 aa23.11■■□□□ 1.29
VPS36-203ENST00000475375 ATAT1Q5SQI0 421 aa23.11■■□□□ 1.29
VPS36-203ENST00000475375 LINC01465Q8N7H1 131 aa23.11■■□□□ 1.29
VPS36-203ENST00000475375 CCDC12Q8WUD4 166 aaPredicted RBP23.11■■□□□ 1.29
VPS36-203ENST00000475375 AUTS2Q8WXX7 1259 aa23.11■■□□□ 1.29
VPS36-203ENST00000475375 DZANK1Q9NVP4 752 aa23.11■■□□□ 1.29
VPS36-203ENST00000475375 SPDYE4A6NLX3 237 aa23.1■■□□□ 1.29
VPS36-203ENST00000475375 ADAMTS3O15072 1205 aa23.1■■□□□ 1.29
VPS36-203ENST00000475375 CSDE1O75534 798 aaKnown RBP23.1■■□□□ 1.29
VPS36-203ENST00000475375 TBC1D8BQ0IIM8 1120 aa23.1■■□□□ 1.29
VPS36-203ENST00000475375 ASTLQ6HA08 431 aaPredicted RBP23.1■■□□□ 1.29
VPS36-203ENST00000475375 KANK3Q6NY19 840 aa23.1■■□□□ 1.29
VPS36-203ENST00000475375 ASCL5Q7RTU5 278 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms