RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 TXNP10599 105 aaKnown RBP7.32□□□□□ -1.24
ATG4A-207ENST00000474825 ATP1A3P13637 1013 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 IDEP14735 1019 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 SCP2P22307 547 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 HOXD13P35453 343 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 RGS2P41220 211 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 STAT5BP51692 787 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 MARSP56192 900 aaKnown RBP7.32□□□□□ -1.24
ATG4A-207ENST00000474825 LACTBP83111 547 aaPredicted RBP7.32□□□□□ -1.24
ATG4A-207ENST00000474825 FANCCQ00597 558 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 SPAG1Q07617 926 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 ALCAMQ13740 583 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 MFSD10Q14728 455 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 DUSP28Q4G0W2 176 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 TJAP1Q5JTD0 557 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 TMEM63BQ5T3F8 832 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 WDR78Q5VTH9 848 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 ANKRD40Q6AI12 368 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 ZNF720Q7Z2F6 126 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 DHX37Q8IY37 1157 aaKnown RBP7.32□□□□□ -1.24
ATG4A-207ENST00000474825 GLIS3Q8NEA6 775 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 PPTC7Q8NI37 304 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 SPIRE2Q8WWL2 714 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 HPS3Q969F9 1004 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 DDX27Q96GQ7 796 aaKnown RBP7.32□□□□□ -1.24
ATG4A-207ENST00000474825 FAM167AQ96KS9 214 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 FGFBP2Q9BYJ0 223 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 DHX33Q9H6R0 707 aaKnown RBP7.32□□□□□ -1.24
ATG4A-207ENST00000474825 MLXIPQ9HAP2 919 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 SLC39A2Q9NP94 309 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 ZNF302Q9NR11 478 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 CYP26B1Q9NR63 512 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 SAMSN1Q9NSI8 373 aaKnown RBP7.32□□□□□ -1.24
ATG4A-207ENST00000474825 RNF186Q9NXI6 227 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 SAGE1Q9NXZ1 904 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 GNEQ9Y223 722 aaKnown RBP7.32□□□□□ -1.24
ATG4A-207ENST00000474825 Q9Y3F1 56 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 KIAA1217Q5T5P2 1943 aa7.32□□□□□ -1.24
ATG4A-207ENST00000474825 ZNFX1Q9P2E3 1918 aaKnown RBP7.32□□□□□ -1.24
ATG4A-207ENST00000474825 PLXNB2O15031 1838 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 IGKV6-21A0A0C4DH24 114 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 A0A1B0GTH6 734 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 A6NJR5 290 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 PDXKO00764 312 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 HIP1RO75146 1068 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 PPFIA4O75335 1185 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 TBCAO75347 108 aaKnown RBP7.31□□□□□ -1.24
ATG4A-207ENST00000474825 DGAT1O75907 488 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 FAM13AO94988 1023 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 KRT18P05783 430 aaKnown RBP7.31□□□□□ -1.24
ATG4A-207ENST00000474825 PLS3P13797 630 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 EEF1GP26641 437 aaKnown RBP7.31□□□□□ -1.24
ATG4A-207ENST00000474825 TCF7P36402 384 aaPredicted RBP7.31□□□□□ -1.24
ATG4A-207ENST00000474825 PBX1P40424 430 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 RFC5P40937 340 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 ADCYAP1R1P41586 468 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 CASP5P51878 434 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 NCKAP1LP55160 1127 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 NPEPPSP55786 919 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 SNRPFP62306 86 aaKnown RBP7.31□□□□□ -1.24
ATG4A-207ENST00000474825 GTF2BQ00403 316 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 PRKCEQ02156 737 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 MYBPC2Q14324 1141 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 NR1I3Q14994 352 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 KNOP1Q1ED39 458 aaKnown RBP7.31□□□□□ -1.24
ATG4A-207ENST00000474825 EDRF1Q3B7T1 1238 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 XKR9Q5GH70 373 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 C6orf132Q5T0Z8 1188 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 FAM160B1Q5W0V3 765 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 KLHL10Q6JEL2 608 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 LRRC55Q6ZSA7 311 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 EEPD1Q7L9B9 569 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 SFR1Q86XK3 245 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 SLC17A8Q8NDX2 589 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 MCPH1Q8NEM0 835 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 ATP8B4Q8TF62 1192 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 BBXQ8WY36 941 aaPredicted RBP7.31□□□□□ -1.24
ATG4A-207ENST00000474825 KIFAP3Q92845 792 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 TRIM47Q96LD4 638 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 DRC1Q96MC2 740 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 SPATA33Q96N06 139 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 NAP1L5Q96NT1 182 aaPredicted RBP7.31□□□□□ -1.24
ATG4A-207ENST00000474825 APBA2Q99767 749 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 SMARCAD1Q9H4L7 1026 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 RTN4Q9NQC3 1192 aaKnown RBP7.31□□□□□ -1.24
ATG4A-207ENST00000474825 XPNPEP1Q9NQW7 623 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 NRBP2Q9NSY0 501 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 INTS13Q9NVM9 706 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 FLRT1Q9NZU1 646 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 LARSQ9P2J5 1176 aaKnown RBP7.31□□□□□ -1.24
ATG4A-207ENST00000474825 KCNG1Q9UIX4 513 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 CTNND2Q9UQB3 1225 aa7.31□□□□□ -1.24
ATG4A-207ENST00000474825 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.3□□□□□ -1.24
ATG4A-207ENST00000474825 TMEM150BA6NC51 233 aa7.3□□□□□ -1.24
ATG4A-207ENST00000474825 TRIM49BA6NDI0 452 aa7.3□□□□□ -1.24
ATG4A-207ENST00000474825 ZBTB42B2RXF5 422 aa7.3□□□□□ -1.24
ATG4A-207ENST00000474825 TNPO2O14787 897 aaKnown RBP7.3□□□□□ -1.24
ATG4A-207ENST00000474825 TGFB1I1O43294 461 aa7.3□□□□□ -1.24
ATG4A-207ENST00000474825 ADCY6O43306 1168 aa7.3□□□□□ -1.24
ATG4A-207ENST00000474825 CBFA2T2O43439 604 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms