RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 TNPO1Q92973 898 aaKnown RBP7.82□□□□□ -1.16
LIMD1-204ENST00000474665 ATP6V0A1Q93050 837 aa7.82□□□□□ -1.16
LIMD1-204ENST00000474665 CNTNAP3BQ96NU0 1288 aa7.82□□□□□ -1.16
LIMD1-204ENST00000474665 KATNAL1Q9BW62 490 aa7.82□□□□□ -1.16
LIMD1-204ENST00000474665 CNTNAP3Q9BZ76 1288 aa7.82□□□□□ -1.16
LIMD1-204ENST00000474665 ZSWIM4Q9H7M6 989 aa7.82□□□□□ -1.16
LIMD1-204ENST00000474665 TUFT1Q9NNX1 390 aa7.82□□□□□ -1.16
LIMD1-204ENST00000474665 XPNPEP1Q9NQW7 623 aa7.82□□□□□ -1.16
LIMD1-204ENST00000474665 BLOC1S4Q9NUP1 217 aa7.82□□□□□ -1.16
LIMD1-204ENST00000474665 CHMP5Q9NZZ3 219 aa7.82□□□□□ -1.16
LIMD1-204ENST00000474665 ZNF215Q9UL58 517 aaPredicted RBP7.82□□□□□ -1.16
LIMD1-204ENST00000474665 CEP131Q9UPN4 1083 aa7.82□□□□□ -1.16
LIMD1-204ENST00000474665 MYH11P35749 1972 aa7.82□□□□□ -1.16
LIMD1-204ENST00000474665 NRCAMQ92823 1304 aa7.81□□□□□ -1.16
LIMD1-204ENST00000474665 IGKV6-21A0A0C4DH24 114 aa7.81□□□□□ -1.16
LIMD1-204ENST00000474665 C17orf102A2RUQ5 167 aa7.81□□□□□ -1.16
LIMD1-204ENST00000474665 DDX11L8A8MPP1 907 aa7.81□□□□□ -1.16
LIMD1-204ENST00000474665 HBP1O60381 514 aa7.81□□□□□ -1.16
LIMD1-204ENST00000474665 FGBP02675 491 aa7.81□□□□□ -1.16
LIMD1-204ENST00000474665 KLRC1P26715 233 aa7.81□□□□□ -1.16
LIMD1-204ENST00000474665 YWHABP31946 246 aaKnown RBP7.81□□□□□ -1.16
LIMD1-204ENST00000474665 LONP1P36776 959 aaKnown RBP7.81□□□□□ -1.16
LIMD1-204ENST00000474665 CCT6AP40227 531 aaKnown RBP7.81□□□□□ -1.16
LIMD1-204ENST00000474665 IGBP1P78318 339 aa7.81□□□□□ -1.16
LIMD1-204ENST00000474665 COL9A2Q14055 689 aaPredicted RBP7.81□□□□□ -1.16
LIMD1-204ENST00000474665 MBTPS1Q14703 1052 aa7.81□□□□□ -1.16
LIMD1-204ENST00000474665 KARSQ15046 597 aaKnown RBP7.81□□□□□ -1.16
LIMD1-204ENST00000474665 PTGISQ16647 500 aa7.81□□□□□ -1.16
LIMD1-204ENST00000474665 TMEM266Q2M3C6 531 aa7.81□□□□□ -1.16
LIMD1-204ENST00000474665 MTHFD1LQ6UB35 978 aa7.81□□□□□ -1.16
LIMD1-204ENST00000474665 ASCL5Q7RTU5 278 aa7.81□□□□□ -1.16
LIMD1-204ENST00000474665 KIAA0319LQ8IZA0 1049 aa7.81□□□□□ -1.16
LIMD1-204ENST00000474665 TMEM199Q8N511 208 aa7.81□□□□□ -1.16
LIMD1-204ENST00000474665 SNX29Q8TEQ0 813 aa7.81□□□□□ -1.16
LIMD1-204ENST00000474665 AK8Q96MA6 479 aa7.81□□□□□ -1.16
LIMD1-204ENST00000474665 PLIN2Q99541 437 aa7.81□□□□□ -1.16
LIMD1-204ENST00000474665 NOC4LQ9BVI4 516 aaKnown RBP7.81□□□□□ -1.16
LIMD1-204ENST00000474665 SEZ6LQ9BYH1 1024 aa7.81□□□□□ -1.16
LIMD1-204ENST00000474665 PPP1R12CQ9BZL4 782 aa7.81□□□□□ -1.16
LIMD1-204ENST00000474665 CCSER1Q9C0I3 900 aa7.81□□□□□ -1.16
LIMD1-204ENST00000474665 CYP26B1Q9NR63 512 aa7.81□□□□□ -1.16
LIMD1-204ENST00000474665 TCEAL9Q9UHQ7 104 aa7.81□□□□□ -1.16
LIMD1-204ENST00000474665 KIAA1024Q9UPX6 916 aa7.81□□□□□ -1.16
LIMD1-204ENST00000474665 TRPC6Q9Y210 931 aa7.81□□□□□ -1.16
LIMD1-204ENST00000474665 PCDHA11Q9Y5I1 949 aa7.81□□□□□ -1.16
LIMD1-204ENST00000474665 PTPRZ1P23471 2315 aaPredicted RBP7.8□□□□□ -1.16
LIMD1-204ENST00000474665 E9PMD0 336 aa7.8□□□□□ -1.16
LIMD1-204ENST00000474665 CUTAO60888 179 aa7.8□□□□□ -1.16
LIMD1-204ENST00000474665 CA3P07451 260 aa7.8□□□□□ -1.16
LIMD1-204ENST00000474665 RARRES1P49788 294 aa7.8□□□□□ -1.16
LIMD1-204ENST00000474665 KRT85P78386 507 aa7.8□□□□□ -1.16
LIMD1-204ENST00000474665 RBL2Q08999 1139 aa7.8□□□□□ -1.16
LIMD1-204ENST00000474665 MTERF2Q49AM1 385 aa7.8□□□□□ -1.16
LIMD1-204ENST00000474665 ZNF484Q5JVG2 852 aa7.8□□□□□ -1.16
LIMD1-204ENST00000474665 RESP18Q5W5W9 173 aa7.8□□□□□ -1.16
LIMD1-204ENST00000474665 KRT79Q5XKE5 535 aa7.8□□□□□ -1.16
LIMD1-204ENST00000474665 PTCRAQ6ISU1 281 aaPredicted RBP7.8□□□□□ -1.16
LIMD1-204ENST00000474665 CLEC17AQ6ZS10 378 aa7.8□□□□□ -1.16
LIMD1-204ENST00000474665 CABP7Q86V35 215 aa7.8□□□□□ -1.16
LIMD1-204ENST00000474665 CKAP2LQ8IYA6 745 aa7.8□□□□□ -1.16
LIMD1-204ENST00000474665 NEK9Q8TD19 979 aa7.8□□□□□ -1.16
LIMD1-204ENST00000474665 KCNG4Q8TDN1 519 aa7.8□□□□□ -1.16
LIMD1-204ENST00000474665 ARNTL2Q8WYA1 636 aa7.8□□□□□ -1.16
LIMD1-204ENST00000474665 ATOH1Q92858 354 aaPredicted RBP7.8□□□□□ -1.16
LIMD1-204ENST00000474665 FAM167AQ96KS9 214 aa7.8□□□□□ -1.16
LIMD1-204ENST00000474665 WNT8AQ9H1J5 351 aa7.8□□□□□ -1.16
LIMD1-204ENST00000474665 DHX33Q9H6R0 707 aaKnown RBP7.8□□□□□ -1.16
LIMD1-204ENST00000474665 IL23AQ9NPF7 189 aa7.8□□□□□ -1.16
LIMD1-204ENST00000474665 NRBP2Q9NSY0 501 aa7.8□□□□□ -1.16
LIMD1-204ENST00000474665 ANKEF1Q9NU02 776 aa7.8□□□□□ -1.16
LIMD1-204ENST00000474665 DDX19AQ9NUU7 478 aaKnown RBP7.8□□□□□ -1.16
LIMD1-204ENST00000474665 SEPT9Q9UHD8 586 aaPredicted RBP7.8□□□□□ -1.16
LIMD1-204ENST00000474665 TUBE1Q9UJT0 475 aa7.8□□□□□ -1.16
LIMD1-204ENST00000474665 CFAP45Q9UL16 551 aa7.8□□□□□ -1.16
LIMD1-204ENST00000474665 PCDHA2Q9Y5H9 948 aa7.8□□□□□ -1.16
LIMD1-204ENST00000474665 TANC1Q9C0D5 1861 aa7.8□□□□□ -1.16
LIMD1-204ENST00000474665 COL1A2P08123 1366 aa7.8□□□□□ -1.16
LIMD1-204ENST00000474665 KMT2BQ9UMN6 2715 aaPredicted RBP7.8□□□□□ -1.16
LIMD1-204ENST00000474665 C5orf42Q9H799 3197 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 MROH7Q68CQ1 1323 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.79□□□□□ -1.16
LIMD1-204ENST00000474665 FAM237AA0A1B0GTK4 181 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 RRN3P2A6NIE6 340 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 MAFO75444 373 aaPredicted RBP7.79□□□□□ -1.16
LIMD1-204ENST00000474665 ARHGEF15O94989 841 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 CHRNA1P02708 482 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 CKBP12277 381 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 XRCC6P12956 609 aaKnown RBP eCLIP7.79□□□□□ -1.16
LIMD1-204ENST00000474665 PLCG1P19174 1290 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 NCLP19338 710 aaKnown RBP7.79□□□□□ -1.16
LIMD1-204ENST00000474665 MUTP22033 750 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 KCNA5P22460 613 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 CYP2C18P33260 490 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 UBA7P41226 1012 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 ME1P48163 572 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 CLCN3P51790 818 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 SLC12A3P55017 1021 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 PTK7Q13308 1070 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 ZRSR1Q15695 479 aaKnown RBP7.79□□□□□ -1.16
LIMD1-204ENST00000474665 E2F4Q16254 413 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms