RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 METAP2P50579 478 aaKnown RBP eCLIP15.84■□□□□ 0.13
CCDC78-209ENST00000474647 EXOSC10Q01780 885 aaKnown RBP15.84■□□□□ 0.13
CCDC78-209ENST00000474647 KRT17Q04695 432 aa15.84■□□□□ 0.13
CCDC78-209ENST00000474647 TCF15Q12870 199 aa15.84■□□□□ 0.13
CCDC78-209ENST00000474647 PFKFB3Q16875 520 aaPredicted RBP15.84■□□□□ 0.13
CCDC78-209ENST00000474647 PRR16Q569H4 304 aa15.84■□□□□ 0.13
CCDC78-209ENST00000474647 EFCAB12Q6NXP0 572 aa15.84■□□□□ 0.13
CCDC78-209ENST00000474647 SYCE2Q6PIF2 218 aa15.84■□□□□ 0.13
CCDC78-209ENST00000474647 LRRC55Q6ZSA7 311 aa15.84■□□□□ 0.13
CCDC78-209ENST00000474647 REXO1Q8N1G1 1221 aaKnown RBP15.84■□□□□ 0.13
CCDC78-209ENST00000474647 C6orf50Q9HD87 102 aa15.84■□□□□ 0.13
CCDC78-209ENST00000474647 NGRNQ9NPE2 291 aaKnown RBP15.84■□□□□ 0.13
CCDC78-209ENST00000474647 CDH22Q9UJ99 828 aa15.84■□□□□ 0.13
CCDC78-209ENST00000474647 PCDHA10Q9Y5I2 948 aa15.84■□□□□ 0.13
CCDC78-209ENST00000474647 TMOD1P28289 359 aa15.83■□□□□ 0.12
CCDC78-209ENST00000474647 FAM189BP81408 668 aa15.83■□□□□ 0.12
CCDC78-209ENST00000474647 KCNC3Q14003 757 aa15.83■□□□□ 0.12
CCDC78-209ENST00000474647 SMC1AQ14683 1233 aaKnown RBP15.83■□□□□ 0.12
CCDC78-209ENST00000474647 TMEM184AQ6ZMB5 413 aa15.83■□□□□ 0.12
CCDC78-209ENST00000474647 ECHDC2Q86YB7 292 aa15.83■□□□□ 0.12
CCDC78-209ENST00000474647 RASGRP4Q8TDF6 673 aa15.83■□□□□ 0.12
CCDC78-209ENST00000474647 CCDC12Q8WUD4 166 aaPredicted RBP15.83■□□□□ 0.12
CCDC78-209ENST00000474647 CRYGNQ8WXF5 182 aa15.83■□□□□ 0.12
CCDC78-209ENST00000474647 ASIC4Q96FT7 647 aa15.83■□□□□ 0.12
CCDC78-209ENST00000474647 FAM167AQ96KS9 214 aa15.83■□□□□ 0.12
CCDC78-209ENST00000474647 S1PR5Q9H228 398 aa15.83■□□□□ 0.12
CCDC78-209ENST00000474647 FAM217BQ9NTX9 383 aaPredicted RBP15.83■□□□□ 0.12
CCDC78-209ENST00000474647 RNF19AQ9NV58 838 aa15.83■□□□□ 0.12
CCDC78-209ENST00000474647 SPG21Q9NZD8 308 aa15.83■□□□□ 0.12
CCDC78-209ENST00000474647 NR2E1Q9Y466 385 aa15.83■□□□□ 0.12
CCDC78-209ENST00000474647 MAGEB2O15479 319 aa15.82■□□□□ 0.12
CCDC78-209ENST00000474647 CHMP2AO43633 222 aa15.82■□□□□ 0.12
CCDC78-209ENST00000474647 OATP04181 439 aa15.82■□□□□ 0.12
CCDC78-209ENST00000474647 FGFR4P22455 802 aa15.82■□□□□ 0.12
CCDC78-209ENST00000474647 EIF4BP23588 611 aaKnown RBP15.82■□□□□ 0.12
CCDC78-209ENST00000474647 ADD1P35611 737 aaKnown RBP15.82■□□□□ 0.12
CCDC78-209ENST00000474647 PRKCEQ02156 737 aa15.82■□□□□ 0.12
CCDC78-209ENST00000474647 CLLU1OSQ5K130 101 aa15.82■□□□□ 0.12
CCDC78-209ENST00000474647 RASEFQ8IZ41 740 aa15.82■□□□□ 0.12
CCDC78-209ENST00000474647 HELQQ8TDG4 1101 aa15.82■□□□□ 0.12
CCDC78-209ENST00000474647 CASP10Q92851 521 aa15.82■□□□□ 0.12
CCDC78-209ENST00000474647 ZMYND12Q9H0C1 365 aa15.82■□□□□ 0.12
CCDC78-209ENST00000474647 ESYT2A0FGR8 921 aa15.81■□□□□ 0.12
CCDC78-209ENST00000474647 WDR64B1ANS9 1081 aa15.81■□□□□ 0.12
CCDC78-209ENST00000474647 PDGFBP01127 241 aaPredicted RBP15.81■□□□□ 0.12
CCDC78-209ENST00000474647 CPA1P15085 419 aa15.81■□□□□ 0.12
CCDC78-209ENST00000474647 HOXB8P17481 243 aaPredicted RBP15.81■□□□□ 0.12
CCDC78-209ENST00000474647 KRT32Q14532 448 aa15.81■□□□□ 0.12
CCDC78-209ENST00000474647 TPRNQ4KMQ1 711 aa15.81■□□□□ 0.12
CCDC78-209ENST00000474647 MCTP2Q6DN12 878 aa15.81■□□□□ 0.12
CCDC78-209ENST00000474647 CES5AQ6NT32 575 aa15.81■□□□□ 0.12
CCDC78-209ENST00000474647 SKAP1Q86WV1 359 aa15.81■□□□□ 0.12
CCDC78-209ENST00000474647 NLRP7Q8WX94 980 aa15.81■□□□□ 0.12
CCDC78-209ENST00000474647 ATOH1Q92858 354 aaPredicted RBP15.81■□□□□ 0.12
CCDC78-209ENST00000474647 ADAMTS10Q9H324 1103 aa15.81■□□□□ 0.12
CCDC78-209ENST00000474647 POMKQ9H5K3 350 aa15.81■□□□□ 0.12
CCDC78-209ENST00000474647 MTCL1Q9Y4B5 1905 aaKnown RBP15.81■□□□□ 0.12
CCDC78-209ENST00000474647 HCFC2Q9Y5Z7 792 aa15.81■□□□□ 0.12
CCDC78-209ENST00000474647 CACNA1HO95180 2353 aa15.8■□□□□ 0.12
CCDC78-209ENST00000474647 ZFHX2Q9C0A1 2572 aaPredicted RBP15.8■□□□□ 0.12
CCDC78-209ENST00000474647 CCDC196A0A1B0GTZ2 297 aa15.8■□□□□ 0.12
CCDC78-209ENST00000474647 NT5C1B-RDH14C9J2C7 533 aa15.8■□□□□ 0.12
CCDC78-209ENST00000474647 GNA11P29992 359 aa15.8■□□□□ 0.12
CCDC78-209ENST00000474647 AVPR2P30518 371 aa15.8■□□□□ 0.12
CCDC78-209ENST00000474647 GPC3P51654 580 aa15.8■□□□□ 0.12
CCDC78-209ENST00000474647 RCAN1P53805 252 aa15.8■□□□□ 0.12
CCDC78-209ENST00000474647 MTMR3Q13615 1198 aa15.8■□□□□ 0.12
CCDC78-209ENST00000474647 UGCGQ16739 394 aa15.8■□□□□ 0.12
CCDC78-209ENST00000474647 Q6ZUG5 572 aa15.8■□□□□ 0.12
CCDC78-209ENST00000474647 SLC39A11Q8N1S5 342 aa15.8■□□□□ 0.12
CCDC78-209ENST00000474647 LINC01465Q8N7H1 131 aa15.8■□□□□ 0.12
CCDC78-209ENST00000474647 KREMEN2Q8NCW0 462 aa15.8■□□□□ 0.12
CCDC78-209ENST00000474647 MRPL9Q9BYD2 267 aaKnown RBP15.8■□□□□ 0.12
CCDC78-209ENST00000474647 DISC1Q9NRI5 854 aa15.8■□□□□ 0.12
CCDC78-209ENST00000474647 NRBP2Q9NSY0 501 aa15.8■□□□□ 0.12
CCDC78-209ENST00000474647 SEPT9Q9UHD8 586 aaPredicted RBP15.8■□□□□ 0.12
CCDC78-209ENST00000474647 C2orf71A6NGG8 1288 aa15.79■□□□□ 0.12
CCDC78-209ENST00000474647 C2CD4DB7Z1M9 353 aa15.79■□□□□ 0.12
CCDC78-209ENST00000474647 H0Y858 1186 aa15.79■□□□□ 0.12
CCDC78-209ENST00000474647 ST18O60284 1047 aa15.79■□□□□ 0.12
CCDC78-209ENST00000474647 ZNF862O60290 1169 aa15.79■□□□□ 0.12
CCDC78-209ENST00000474647 GFRA3O60609 400 aa15.79■□□□□ 0.12
CCDC78-209ENST00000474647 GAS7O60861 476 aa15.79■□□□□ 0.12
CCDC78-209ENST00000474647 ZC3H11AO75152 810 aaKnown RBP eCLIP15.79■□□□□ 0.12
CCDC78-209ENST00000474647 CSDE1O75534 798 aaKnown RBP15.79■□□□□ 0.12
CCDC78-209ENST00000474647 HMGB1P09429 215 aaKnown RBP15.79■□□□□ 0.12
CCDC78-209ENST00000474647 WEE2P0C1S8 567 aa15.79■□□□□ 0.12
CCDC78-209ENST00000474647 ALDH7A1P49419 539 aaKnown RBP15.79■□□□□ 0.12
CCDC78-209ENST00000474647 AKAP17AQ02040 695 aaKnown RBP15.79■□□□□ 0.12
CCDC78-209ENST00000474647 TBC1D8BQ0IIM8 1120 aa15.79■□□□□ 0.12
CCDC78-209ENST00000474647 RARS2Q5T160 578 aaKnown RBP15.79■□□□□ 0.12
CCDC78-209ENST00000474647 ERICH6BQ5W0A0 696 aa15.79■□□□□ 0.12
CCDC78-209ENST00000474647 TMEM87AQ8NBN3 555 aa15.79■□□□□ 0.12
CCDC78-209ENST00000474647 BRF1Q92994 677 aa15.79■□□□□ 0.12
CCDC78-209ENST00000474647 PHKBQ93100 1093 aa15.79■□□□□ 0.12
CCDC78-209ENST00000474647 TMEM169Q96HH4 297 aa15.79■□□□□ 0.12
CCDC78-209ENST00000474647 RIPOR3Q96MK2 946 aa15.79■□□□□ 0.12
CCDC78-209ENST00000474647 DACT1Q9NYF0 836 aa15.79■□□□□ 0.12
CCDC78-209ENST00000474647 DMDP11532 3685 aa15.78■□□□□ 0.12
CCDC78-209ENST00000474647 A0A0U1RQF3 1178 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms