RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.76■■□□□ 1.07
SSR1-204ENST00000474597 FAM184BQ9ULE4 1060 aa21.76■■□□□ 1.07
SSR1-204ENST00000474597 NKRFO15226 690 aaKnown RBP eCLIP21.75■■□□□ 1.07
SSR1-204ENST00000474597 SLC16A4O15374 487 aa21.75■■□□□ 1.07
SSR1-204ENST00000474597 TRIM21P19474 475 aaKnown RBP21.75■■□□□ 1.07
SSR1-204ENST00000474597 NCKAP1LP55160 1127 aa21.75■■□□□ 1.07
SSR1-204ENST00000474597 HSDL1Q3SXM5 330 aa21.75■■□□□ 1.07
SSR1-204ENST00000474597 RETREG2Q8NC44 543 aa21.75■■□□□ 1.07
SSR1-204ENST00000474597 IFT74Q96LB3 600 aa21.75■■□□□ 1.07
SSR1-204ENST00000474597 NIFKQ9BYG3 293 aaKnown RBP21.75■■□□□ 1.07
SSR1-204ENST00000474597 METTL14Q9HCE5 456 aaKnown RBP21.75■■□□□ 1.07
SSR1-204ENST00000474597 ARMCX3Q9UH62 379 aaPredicted RBP21.75■■□□□ 1.07
SSR1-204ENST00000474597 STX10O60499 249 aa21.74■■□□□ 1.07
SSR1-204ENST00000474597 KCNJ6P48051 423 aa21.74■■□□□ 1.07
SSR1-204ENST00000474597 FXR1P51114 621 aaKnown RBP eCLIP21.74■■□□□ 1.07
SSR1-204ENST00000474597 SREBF2Q12772 1141 aa21.74■■□□□ 1.07
SSR1-204ENST00000474597 TRIM59Q8IWR1 403 aa21.74■■□□□ 1.07
SSR1-204ENST00000474597 SMC1BQ8NDV3 1235 aa21.74■■□□□ 1.07
SSR1-204ENST00000474597 COPS5Q92905 334 aa21.74■■□□□ 1.07
SSR1-204ENST00000474597 MAML3Q96JK9 1138 aa21.74■■□□□ 1.07
SSR1-204ENST00000474597 NAA15Q9BXJ9 866 aaKnown RBP21.74■■□□□ 1.07
SSR1-204ENST00000474597 KMT5AQ9NQR1 393 aa21.74■■□□□ 1.07
SSR1-204ENST00000474597 PDLIM7Q9NR12 457 aa21.74■■□□□ 1.07
SSR1-204ENST00000474597 AGPAT3Q9NRZ7 376 aa21.74■■□□□ 1.07
SSR1-204ENST00000474597 ARHGAP6O43182 974 aa21.73■■□□□ 1.07
SSR1-204ENST00000474597 GTF2BQ00403 316 aa21.73■■□□□ 1.07
SSR1-204ENST00000474597 PPP2R3AQ06190 1150 aa21.73■■□□□ 1.07
SSR1-204ENST00000474597 EMC2Q15006 297 aa21.73■■□□□ 1.07
SSR1-204ENST00000474597 DNTTIP2Q5QJE6 756 aaKnown RBP21.73■■□□□ 1.07
SSR1-204ENST00000474597 MAMDC4Q6UXC1 1216 aa21.73■■□□□ 1.07
SSR1-204ENST00000474597 SLC7A3Q8WY07 619 aa21.73■■□□□ 1.07
SSR1-204ENST00000474597 IQCDQ96DY2 449 aa21.73■■□□□ 1.07
SSR1-204ENST00000474597 ADGRA2Q96PE1 1338 aa21.73■■□□□ 1.07
SSR1-204ENST00000474597 KCNG1Q9UIX4 513 aa21.73■■□□□ 1.07
SSR1-204ENST00000474597 EXOC7Q9UPT5 735 aa21.73■■□□□ 1.07
SSR1-204ENST00000474597 FRMD4BQ9Y2L6 1034 aa21.73■■□□□ 1.07
SSR1-204ENST00000474597 ZNF236Q9UL36 1845 aa21.73■■□□□ 1.07
SSR1-204ENST00000474597 NPTX2P47972 431 aa21.73■■□□□ 1.07
SSR1-204ENST00000474597 RTP1P59025 263 aa21.73■■□□□ 1.07
SSR1-204ENST00000474597 TSR1Q2NL82 804 aaKnown RBP21.73■■□□□ 1.07
SSR1-204ENST00000474597 POLR3FQ9H1D9 316 aaPredicted RBP21.73■■□□□ 1.07
SSR1-204ENST00000474597 ZFYVE28Q9HCC9 887 aa21.73■■□□□ 1.07
SSR1-204ENST00000474597 XPNPEP1Q9NQW7 623 aa21.73■■□□□ 1.07
SSR1-204ENST00000474597 CGNQ9P2M7 1197 aaKnown RBP21.73■■□□□ 1.07
SSR1-204ENST00000474597 LUC7L2Q9Y383 392 aaKnown RBP21.73■■□□□ 1.07
SSR1-204ENST00000474597 LGR5O75473 907 aa21.72■■□□□ 1.07
SSR1-204ENST00000474597 AKAP3O75969 853 aa21.72■■□□□ 1.07
SSR1-204ENST00000474597 ECM2O94769 699 aaPredicted RBP21.72■■□□□ 1.07
SSR1-204ENST00000474597 KRT9P35527 623 aa21.72■■□□□ 1.07
SSR1-204ENST00000474597 PSMC2P35998 433 aaKnown RBP21.72■■□□□ 1.07
SSR1-204ENST00000474597 RFC5P40937 340 aa21.72■■□□□ 1.07
SSR1-204ENST00000474597 SOX10P56693 466 aa21.72■■□□□ 1.07
SSR1-204ENST00000474597 LAMC2Q13753 1193 aa21.72■■□□□ 1.07
SSR1-204ENST00000474597 TAPT1Q6NXT6 567 aa21.72■■□□□ 1.07
SSR1-204ENST00000474597 SPIRE2Q8WWL2 714 aa21.72■■□□□ 1.07
SSR1-204ENST00000474597 HVCN1Q96D96 273 aa21.72■■□□□ 1.07
SSR1-204ENST00000474597 IKZF4Q9H2S9 585 aa21.72■■□□□ 1.07
SSR1-204ENST00000474597 ABHD10Q9NUJ1 306 aa21.72■■□□□ 1.07
SSR1-204ENST00000474597 EMSYQ7Z589 1322 aa21.71■■□□□ 1.07
SSR1-204ENST00000474597 TTC26A0AVF1 554 aa21.71■■□□□ 1.07
SSR1-204ENST00000474597 H0YCG3 227 aa21.71■■□□□ 1.07
SSR1-204ENST00000474597 TLR2O60603 784 aa21.71■■□□□ 1.07
SSR1-204ENST00000474597 GH1P01241 217 aa21.71■■□□□ 1.07
SSR1-204ENST00000474597 XRCC5P13010 732 aaKnown RBP21.71■■□□□ 1.07
SSR1-204ENST00000474597 MARK3P27448 753 aa21.71■■□□□ 1.07
SSR1-204ENST00000474597 PLPPR4Q7Z2D5 763 aa21.71■■□□□ 1.07
SSR1-204ENST00000474597 TMEM139Q8IV31 216 aa21.71■■□□□ 1.07
SSR1-204ENST00000474597 FAM186BQ8IYM0 893 aa21.71■■□□□ 1.07
SSR1-204ENST00000474597 BBXQ8WY36 941 aaPredicted RBP21.71■■□□□ 1.07
SSR1-204ENST00000474597 MKNK1Q9BUB5 465 aa21.71■■□□□ 1.07
SSR1-204ENST00000474597 MMRN2Q9H8L6 949 aa21.71■■□□□ 1.07
SSR1-204ENST00000474597 CAPN11Q9UMQ6 739 aa21.71■■□□□ 1.07
SSR1-204ENST00000474597 PPME1Q9Y570 386 aa21.71■■□□□ 1.07
SSR1-204ENST00000474597 ABCD1P33897 745 aa21.71■■□□□ 1.07
SSR1-204ENST00000474597 CASP4P49662 377 aa21.71■■□□□ 1.07
SSR1-204ENST00000474597 KLK7P49862 253 aa21.71■■□□□ 1.07
SSR1-204ENST00000474597 CYP2J2P51589 502 aa21.71■■□□□ 1.07
SSR1-204ENST00000474597 DCAF17Q5H9S7 520 aaPredicted RBP21.71■■□□□ 1.07
SSR1-204ENST00000474597 PAXIP1Q6ZW49 1069 aaPredicted RBP21.71■■□□□ 1.07
SSR1-204ENST00000474597 TMEM161BQ8NDZ6 487 aa21.71■■□□□ 1.07
SSR1-204ENST00000474597 ZNF397Q8NF99 534 aaPredicted RBP21.71■■□□□ 1.07
SSR1-204ENST00000474597 NPLOC4Q8TAT6 608 aa21.71■■□□□ 1.07
SSR1-204ENST00000474597 NTPCRQ9BSD7 190 aaKnown RBP21.71■■□□□ 1.07
SSR1-204ENST00000474597 TINF2Q9BSI4 451 aa21.71■■□□□ 1.07
SSR1-204ENST00000474597 SMARCAD1Q9H4L7 1026 aa21.71■■□□□ 1.07
SSR1-204ENST00000474597 DHX33Q9H6R0 707 aaKnown RBP21.71■■□□□ 1.07
SSR1-204ENST00000474597 RBM47A0AV96 593 aaKnown RBP21.7■■□□□ 1.06
SSR1-204ENST00000474597 DENND3A2RUS2 1198 aa21.7■■□□□ 1.06
SSR1-204ENST00000474597 TMEM88BA6NKF7 163 aa21.7■■□□□ 1.06
SSR1-204ENST00000474597 FAM155AB1AL88 458 aaPredicted RBP21.7■■□□□ 1.06
SSR1-204ENST00000474597 CCP110O43303 1012 aa21.7■■□□□ 1.06
SSR1-204ENST00000474597 SLC26A2P50443 739 aa21.7■■□□□ 1.06
SSR1-204ENST00000474597 SNRPFP62306 86 aaKnown RBP21.7■■□□□ 1.06
SSR1-204ENST00000474597 KCNH2Q12809 1159 aa21.7■■□□□ 1.06
SSR1-204ENST00000474597 MYBPC2Q14324 1141 aa21.7■■□□□ 1.06
SSR1-204ENST00000474597 FIGNQ5HY92 759 aa21.7■■□□□ 1.06
SSR1-204ENST00000474597 TCERG1LQ5VWI1 586 aa21.7■■□□□ 1.06
SSR1-204ENST00000474597 BSNDQ8WZ55 320 aa21.7■■□□□ 1.06
SSR1-204ENST00000474597 KIFC3Q9BVG8 833 aa21.7■■□□□ 1.06
SSR1-204ENST00000474597 ABHD16BQ9H3Z7 469 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms