RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 USP17L8P0C7I0 530 aa20.13■□□□□ 0.81
ECHDC1-214ENST00000474289 NEFHP12036 1026 aa20.13■□□□□ 0.81
ECHDC1-214ENST00000474289 GALCP54803 685 aa20.13■□□□□ 0.81
ECHDC1-214ENST00000474289 DHX34Q14147 1143 aaKnown RBP20.13■□□□□ 0.81
ECHDC1-214ENST00000474289 SPATA21Q7Z572 469 aa20.13■□□□□ 0.81
ECHDC1-214ENST00000474289 U2AF1L4Q8WU68 220 aaKnown RBP20.13■□□□□ 0.81
ECHDC1-214ENST00000474289 SCFD1Q8WVM8 642 aa20.13■□□□□ 0.81
ECHDC1-214ENST00000474289 RMDN2Q96LZ7 410 aa20.13■□□□□ 0.81
ECHDC1-214ENST00000474289 ANKRD27Q96NW4 1050 aa20.13■□□□□ 0.81
ECHDC1-214ENST00000474289 AJAP1Q9UKB5 411 aaPredicted RBP20.13■□□□□ 0.81
ECHDC1-214ENST00000474289 NIP7Q9Y221 180 aaKnown RBP eCLIP20.13■□□□□ 0.81
ECHDC1-214ENST00000474289 MPHOSPH10O00566 681 aaKnown RBP20.12■□□□□ 0.81
ECHDC1-214ENST00000474289 HGSO14964 777 aaPredicted RBP20.12■□□□□ 0.81
ECHDC1-214ENST00000474289 RIPK2O43353 540 aa20.12■□□□□ 0.81
ECHDC1-214ENST00000474289 TDP2O95551 362 aa20.12■□□□□ 0.81
ECHDC1-214ENST00000474289 CCNB1P14635 433 aa20.12■□□□□ 0.81
ECHDC1-214ENST00000474289 PON1P27169 355 aa20.12■□□□□ 0.81
ECHDC1-214ENST00000474289 ZNF211Q13398 564 aaPredicted RBP20.12■□□□□ 0.81
ECHDC1-214ENST00000474289 SNX1Q13596 522 aa20.12■□□□□ 0.81
ECHDC1-214ENST00000474289 VPS36Q86VN1 386 aa20.12■□□□□ 0.81
ECHDC1-214ENST00000474289 REXO1Q8N1G1 1221 aaKnown RBP20.12■□□□□ 0.81
ECHDC1-214ENST00000474289 TEX9Q8N6V9 391 aa20.12■□□□□ 0.81
ECHDC1-214ENST00000474289 CARD9Q9H257 536 aa20.12■□□□□ 0.81
ECHDC1-214ENST00000474289 NKX1-2Q9UD57 310 aaPredicted RBP20.12■□□□□ 0.81
ECHDC1-214ENST00000474289 INTUQ9ULD6 942 aa20.12■□□□□ 0.81
ECHDC1-214ENST00000474289 PCDHA2Q9Y5H9 948 aa20.12■□□□□ 0.81
ECHDC1-214ENST00000474289 WFS1O76024 890 aa20.12■□□□□ 0.81
ECHDC1-214ENST00000474289 KLRK1P26718 216 aa20.12■□□□□ 0.81
ECHDC1-214ENST00000474289 RPL21P46778 160 aaKnown RBP20.12■□□□□ 0.81
ECHDC1-214ENST00000474289 DIXDC1Q155Q3 683 aa20.12■□□□□ 0.81
ECHDC1-214ENST00000474289 EXOC3L4Q17RC7 722 aa20.12■□□□□ 0.81
ECHDC1-214ENST00000474289 ANO7Q6IWH7 933 aa20.12■□□□□ 0.81
ECHDC1-214ENST00000474289 INTS5Q6P9B9 1019 aaKnown RBP20.12■□□□□ 0.81
ECHDC1-214ENST00000474289 C3orf67Q6ZVT6 689 aa20.12■□□□□ 0.81
ECHDC1-214ENST00000474289 ZC3H3Q8IXZ2 948 aaKnown RBP20.12■□□□□ 0.81
ECHDC1-214ENST00000474289 C18orf8Q96DM3 657 aa20.12■□□□□ 0.81
ECHDC1-214ENST00000474289 DYNLL2Q96FJ2 89 aa20.12■□□□□ 0.81
ECHDC1-214ENST00000474289 RAB34Q9BZG1 259 aa20.12■□□□□ 0.81
ECHDC1-214ENST00000474289 RTCBQ9Y3I0 505 aaKnown RBP20.12■□□□□ 0.81
ECHDC1-214ENST00000474289 TAF1P21675 1872 aa20.11■□□□□ 0.81
ECHDC1-214ENST00000474289 ANXA13P27216 316 aa20.11■□□□□ 0.81
ECHDC1-214ENST00000474289 PDIA5Q14554 519 aa20.11■□□□□ 0.81
ECHDC1-214ENST00000474289 MFSD5Q6N075 450 aa20.11■□□□□ 0.81
ECHDC1-214ENST00000474289 OTUD6AQ7L8S5 288 aa20.11■□□□□ 0.81
ECHDC1-214ENST00000474289 UTP4Q969X6 686 aaKnown RBP20.11■□□□□ 0.81
ECHDC1-214ENST00000474289 FAM84BQ96KN1 310 aaPredicted RBP20.11■□□□□ 0.81
ECHDC1-214ENST00000474289 NAP1L3Q99457 506 aaPredicted RBP20.11■□□□□ 0.81
ECHDC1-214ENST00000474289 PRKAG3Q9UGI9 489 aa20.11■□□□□ 0.81
ECHDC1-214ENST00000474289 STX8Q9UNK0 236 aa20.11■□□□□ 0.81
ECHDC1-214ENST00000474289 TMEM120BA0PK00 339 aa20.11■□□□□ 0.81
ECHDC1-214ENST00000474289 HIP1RO75146 1068 aa20.11■□□□□ 0.81
ECHDC1-214ENST00000474289 KRT13P13646 458 aa20.11■□□□□ 0.81
ECHDC1-214ENST00000474289 CREB1P16220 341 aa20.11■□□□□ 0.81
ECHDC1-214ENST00000474289 GNAZP19086 355 aa20.11■□□□□ 0.81
ECHDC1-214ENST00000474289 GNPTABQ3T906 1256 aa20.11■□□□□ 0.81
ECHDC1-214ENST00000474289 ANKLE1Q8NAG6 615 aa20.11■□□□□ 0.81
ECHDC1-214ENST00000474289 SLC35G2Q8TBE7 412 aa20.11■□□□□ 0.81
ECHDC1-214ENST00000474289 SPZ1Q9BXG8 430 aa20.11■□□□□ 0.81
ECHDC1-214ENST00000474289 MLXIPLQ9NP71 852 aa20.11■□□□□ 0.81
ECHDC1-214ENST00000474289 RASAL2Q9UJF2 1139 aa20.11■□□□□ 0.81
ECHDC1-214ENST00000474289 ZMYND8Q9ULU4 1186 aaPredicted RBP20.11■□□□□ 0.81
ECHDC1-214ENST00000474289 DIS3Q9Y2L1 958 aaKnown RBP20.11■□□□□ 0.81
ECHDC1-214ENST00000474289 LRRC42Q9Y546 428 aa20.11■□□□□ 0.81
ECHDC1-214ENST00000474289 CETN3O15182 167 aa20.1■□□□□ 0.81
ECHDC1-214ENST00000474289 CAMTA2O94983 1202 aa20.1■□□□□ 0.81
ECHDC1-214ENST00000474289 FERP16591 822 aa20.1■□□□□ 0.81
ECHDC1-214ENST00000474289 NR2F2P24468 414 aa20.1■□□□□ 0.81
ECHDC1-214ENST00000474289 PAPOLAP51003 745 aaKnown RBP20.1■□□□□ 0.81
ECHDC1-214ENST00000474289 CACNB1Q02641 598 aaPredicted RBP20.1■□□□□ 0.81
ECHDC1-214ENST00000474289 MGAT5Q09328 741 aa20.1■□□□□ 0.81
ECHDC1-214ENST00000474289 CAVIN4Q5BKX8 364 aa20.1■□□□□ 0.81
ECHDC1-214ENST00000474289 SOGA3Q5TF21 947 aa20.1■□□□□ 0.81
ECHDC1-214ENST00000474289 TSC22D3Q99576 134 aa20.1■□□□□ 0.81
ECHDC1-214ENST00000474289 TMEM47Q9BQJ4 181 aa20.1■□□□□ 0.81
ECHDC1-214ENST00000474289 PLCD4Q9BRC7 762 aa20.1■□□□□ 0.81
ECHDC1-214ENST00000474289 PAPOLBQ9NRJ5 636 aaKnown RBP20.1■□□□□ 0.81
ECHDC1-214ENST00000474289 IGSF9BQ9UPX0 1349 aa20.1■□□□□ 0.81
ECHDC1-214ENST00000474289 EDIL3O43854 480 aa20.1■□□□□ 0.81
ECHDC1-214ENST00000474289 PTGIRP43119 386 aa20.1■□□□□ 0.81
ECHDC1-214ENST00000474289 JAM2P57087 298 aa20.1■□□□□ 0.81
ECHDC1-214ENST00000474289 PPATQ06203 517 aa20.1■□□□□ 0.81
ECHDC1-214ENST00000474289 ETNK1Q9HBU6 452 aa20.1■□□□□ 0.81
ECHDC1-214ENST00000474289 EMILIN3Q9NT22 766 aa20.1■□□□□ 0.81
ECHDC1-214ENST00000474289 MTRF1LQ9UGC7 380 aaKnown RBP20.1■□□□□ 0.81
ECHDC1-214ENST00000474289 PHLPP1O60346 1717 aa20.09■□□□□ 0.81
ECHDC1-214ENST00000474289 IRF6O14896 467 aa20.09■□□□□ 0.81
ECHDC1-214ENST00000474289 UNC5CO95185 931 aa20.09■□□□□ 0.81
ECHDC1-214ENST00000474289 AFPP02771 609 aaKnown RBP20.09■□□□□ 0.81
ECHDC1-214ENST00000474289 SKIV2L2P42285 1042 aaKnown RBP20.09■□□□□ 0.81
ECHDC1-214ENST00000474289 RPS6KA3P51812 740 aa20.09■□□□□ 0.81
ECHDC1-214ENST00000474289 SLC17A8Q8NDX2 589 aa20.09■□□□□ 0.81
ECHDC1-214ENST00000474289 LNX1Q8TBB1 728 aaPredicted RBP20.09■□□□□ 0.81
ECHDC1-214ENST00000474289 RFFLQ8WZ73 363 aa20.09■□□□□ 0.81
ECHDC1-214ENST00000474289 LZTS2Q9BRK4 669 aa20.09■□□□□ 0.81
ECHDC1-214ENST00000474289 JAG2Q9Y219 1238 aa20.09■□□□□ 0.81
ECHDC1-214ENST00000474289 MAP3K13O43283 966 aa20.08■□□□□ 0.81
ECHDC1-214ENST00000474289 TSPY3P0CV98 308 aa20.08■□□□□ 0.81
ECHDC1-214ENST00000474289 TSPY8P0CW00 308 aa20.08■□□□□ 0.81
ECHDC1-214ENST00000474289 MYBL1P10243 752 aa20.08■□□□□ 0.81
ECHDC1-214ENST00000474289 GNAT1P11488 350 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms