RNA–Protein interactions for RNA: ENST00000474116.5

CUL4A-208, Transcript of cullin 4A, humanhuman

TSL 2

Gene CUL4A, Length 866 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-208ENST00000474116 SMCO2A6NFE2 343 aa19.74■□□□□ 0.75
CUL4A-208ENST00000474116 IPO5O00410 1097 aaKnown RBP19.74■□□□□ 0.75
CUL4A-208ENST00000474116 SLC27A2O14975 620 aa19.74■□□□□ 0.75
CUL4A-208ENST00000474116 WEE2P0C1S8 567 aa19.74■□□□□ 0.75
CUL4A-208ENST00000474116 ZSCAN20P17040 1043 aaPredicted RBP19.74■□□□□ 0.75
CUL4A-208ENST00000474116 CLCN3P51790 818 aa19.74■□□□□ 0.75
CUL4A-208ENST00000474116 CLCN5P51795 746 aa19.74■□□□□ 0.75
CUL4A-208ENST00000474116 NLRP11P59045 1033 aaKnown RBP19.74■□□□□ 0.75
CUL4A-208ENST00000474116 AP3B2Q13367 1082 aa19.74■□□□□ 0.75
CUL4A-208ENST00000474116 ZNF598Q86UK7 904 aaKnown RBP19.74■□□□□ 0.75
CUL4A-208ENST00000474116 MICU3Q86XE3 530 aa19.74■□□□□ 0.75
CUL4A-208ENST00000474116 PLA2G4DQ86XP0 818 aa19.74■□□□□ 0.75
CUL4A-208ENST00000474116 CKAP2LQ8IYA6 745 aa19.74■□□□□ 0.75
CUL4A-208ENST00000474116 C12orf76Q8N812 135 aaPredicted RBP19.74■□□□□ 0.75
CUL4A-208ENST00000474116 LSG1Q9H089 658 aaKnown RBP19.74■□□□□ 0.75
CUL4A-208ENST00000474116 LIMD1Q9UGP4 676 aa19.74■□□□□ 0.75
CUL4A-208ENST00000474116 CXCL14O95715 111 aa19.73■□□□□ 0.75
CUL4A-208ENST00000474116 CYP3A4P08684 503 aa19.73■□□□□ 0.75
CUL4A-208ENST00000474116 EIF4BP23588 611 aaKnown RBP19.73■□□□□ 0.75
CUL4A-208ENST00000474116 RARS2Q5T160 578 aaKnown RBP19.73■□□□□ 0.75
CUL4A-208ENST00000474116 KIAA1841Q6NSI8 718 aa19.73■□□□□ 0.75
CUL4A-208ENST00000474116 ZNF746Q6NUN9 644 aaPredicted RBP19.73■□□□□ 0.75
CUL4A-208ENST00000474116 KANK3Q6NY19 840 aa19.73■□□□□ 0.75
CUL4A-208ENST00000474116 BARHL2Q9NY43 387 aa19.73■□□□□ 0.75
CUL4A-208ENST00000474116 V9GY48 417 aaPredicted RBP19.73■□□□□ 0.75
CUL4A-208ENST00000474116 PTPRZ1P23471 2315 aaPredicted RBP19.73■□□□□ 0.75
CUL4A-208ENST00000474116 MYH9P35579 1960 aaKnown RBP19.72■□□□□ 0.75
CUL4A-208ENST00000474116 A0A0U1RQF3 1178 aa19.72■□□□□ 0.75
CUL4A-208ENST00000474116 MAGEB2O15479 319 aa19.72■□□□□ 0.75
CUL4A-208ENST00000474116 EOMESO95936 686 aa19.72■□□□□ 0.75
CUL4A-208ENST00000474116 BCAR1P56945 870 aa19.72■□□□□ 0.75
CUL4A-208ENST00000474116 NECTIN1Q15223 517 aa19.72■□□□□ 0.75
CUL4A-208ENST00000474116 EFCAB12Q6NXP0 572 aa19.72■□□□□ 0.75
CUL4A-208ENST00000474116 TRMT1LQ7Z2T5 733 aaKnown RBP19.72■□□□□ 0.75
CUL4A-208ENST00000474116 FRMD5Q7Z6J6 570 aa19.72■□□□□ 0.75
CUL4A-208ENST00000474116 TDRD5Q8NAT2 981 aaKnown RBP19.72■□□□□ 0.75
CUL4A-208ENST00000474116 RNF169Q8NCN4 708 aa19.72■□□□□ 0.75
CUL4A-208ENST00000474116 HELQQ8TDG4 1101 aa19.72■□□□□ 0.75
CUL4A-208ENST00000474116 RBM28Q9NW13 759 aaKnown RBP19.72■□□□□ 0.75
CUL4A-208ENST00000474116 CEP131Q9UPN4 1083 aa19.72■□□□□ 0.75
CUL4A-208ENST00000474116 USTQ9Y2C2 406 aa19.72■□□□□ 0.75
CUL4A-208ENST00000474116 NT5C1B-RDH14C9J2C7 533 aa19.71■□□□□ 0.75
CUL4A-208ENST00000474116 hCG_1984214I3L0E3 225 aa19.71■□□□□ 0.75
CUL4A-208ENST00000474116 METAP2P50579 478 aaKnown RBP eCLIP19.71■□□□□ 0.75
CUL4A-208ENST00000474116 ATAT1Q5SQI0 421 aa19.71■□□□□ 0.75
CUL4A-208ENST00000474116 CREB3L3Q68CJ9 461 aa19.71■□□□□ 0.75
CUL4A-208ENST00000474116 APOA5Q6Q788 366 aa19.71■□□□□ 0.75
CUL4A-208ENST00000474116 SMAP1Q8IYB5 467 aaPredicted RBP19.71■□□□□ 0.75
CUL4A-208ENST00000474116 ZNF710Q8N1W2 664 aa19.71■□□□□ 0.75
CUL4A-208ENST00000474116 PLCD3Q8N3E9 789 aa19.71■□□□□ 0.75
CUL4A-208ENST00000474116 ZNF713Q8N859 430 aaPredicted RBP19.71■□□□□ 0.75
CUL4A-208ENST00000474116 FEZF2Q8TBJ5 459 aa19.71■□□□□ 0.75
CUL4A-208ENST00000474116 SLC22A17Q8WUG5 538 aa19.71■□□□□ 0.75
CUL4A-208ENST00000474116 ZNF577Q9BSK1 485 aa19.71■□□□□ 0.75
CUL4A-208ENST00000474116 ZBP1Q9H171 429 aa19.71■□□□□ 0.75
CUL4A-208ENST00000474116 GLT8D2Q9H1C3 349 aa19.71■□□□□ 0.75
CUL4A-208ENST00000474116 TBC1D22BQ9NU19 505 aa19.71■□□□□ 0.75
CUL4A-208ENST00000474116 DZANK1Q9NVP4 752 aa19.71■□□□□ 0.75
CUL4A-208ENST00000474116 AKT3Q9Y243 479 aa19.71■□□□□ 0.75
CUL4A-208ENST00000474116 PCDHA10Q9Y5I2 948 aa19.71■□□□□ 0.75
CUL4A-208ENST00000474116 IRAK3Q9Y616 596 aa19.71■□□□□ 0.75
CUL4A-208ENST00000474116 PSAPP07602 524 aa19.7■□□□□ 0.74
CUL4A-208ENST00000474116 DARSP14868 501 aaKnown RBP19.7■□□□□ 0.74
CUL4A-208ENST00000474116 EPCAMP16422 314 aa19.7■□□□□ 0.74
CUL4A-208ENST00000474116 ALDH7A1P49419 539 aaKnown RBP19.7■□□□□ 0.74
CUL4A-208ENST00000474116 JAKMIP3Q5VZ66 844 aa19.7■□□□□ 0.74
CUL4A-208ENST00000474116 CWF19L1Q69YN2 538 aaKnown RBP19.7■□□□□ 0.74
CUL4A-208ENST00000474116 MCTP2Q6DN12 878 aa19.7■□□□□ 0.74
CUL4A-208ENST00000474116 ERMP1Q7Z2K6 904 aa19.7■□□□□ 0.74
CUL4A-208ENST00000474116 VPS52Q8N1B4 723 aa19.7■□□□□ 0.74
CUL4A-208ENST00000474116 LRRC71Q8N4P6 559 aa19.7■□□□□ 0.74
CUL4A-208ENST00000474116 NKD2Q969F2 451 aaPredicted RBP19.7■□□□□ 0.74
CUL4A-208ENST00000474116 MAP7D2Q96T17 732 aa19.7■□□□□ 0.74
CUL4A-208ENST00000474116 GABBR1Q9UBS5 961 aa19.7■□□□□ 0.74
CUL4A-208ENST00000474116 DENND4AQ7Z401 1863 aa19.69■□□□□ 0.74
CUL4A-208ENST00000474116 ADAMTS3O15072 1205 aa19.69■□□□□ 0.74
CUL4A-208ENST00000474116 NPR3P17342 541 aa19.69■□□□□ 0.74
CUL4A-208ENST00000474116 TMOD1P28289 359 aa19.69■□□□□ 0.74
CUL4A-208ENST00000474116 GPC3P51654 580 aa19.69■□□□□ 0.74
CUL4A-208ENST00000474116 SYNE3Q6ZMZ3 975 aa19.69■□□□□ 0.74
CUL4A-208ENST00000474116 TMEM173Q86WV6 379 aaPredicted RBP19.69■□□□□ 0.74
CUL4A-208ENST00000474116 AUTS2Q8WXX7 1259 aa19.69■□□□□ 0.74
CUL4A-208ENST00000474116 TMEM169Q96HH4 297 aa19.69■□□□□ 0.74
CUL4A-208ENST00000474116 ZNF668Q96K58 619 aaPredicted RBP19.69■□□□□ 0.74
CUL4A-208ENST00000474116 MRPL9Q9BYD2 267 aaKnown RBP19.69■□□□□ 0.74
CUL4A-208ENST00000474116 MFSD1Q9H3U5 465 aa19.69■□□□□ 0.74
CUL4A-208ENST00000474116 CYP26B1Q9NR63 512 aa19.69■□□□□ 0.74
CUL4A-208ENST00000474116 FAM217BQ9NTX9 383 aaPredicted RBP19.69■□□□□ 0.74
CUL4A-208ENST00000474116 DBR1Q9UK59 544 aaKnown RBP19.69■□□□□ 0.74
CUL4A-208ENST00000474116 BRPF3Q9ULD4 1205 aa19.69■□□□□ 0.74
CUL4A-208ENST00000474116 RIF1Q5UIP0 2472 aaKnown RBP19.69■□□□□ 0.74
CUL4A-208ENST00000474116 WDR81Q562E7 1941 aa19.68■□□□□ 0.74
CUL4A-208ENST00000474116 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.68■□□□□ 0.74
CUL4A-208ENST00000474116 PI15O43692 258 aa19.68■□□□□ 0.74
CUL4A-208ENST00000474116 ZNF862O60290 1169 aa19.68■□□□□ 0.74
CUL4A-208ENST00000474116 CTSAP10619 480 aa19.68■□□□□ 0.74
CUL4A-208ENST00000474116 FGFR4P22455 802 aa19.68■□□□□ 0.74
CUL4A-208ENST00000474116 CA8P35219 290 aa19.68■□□□□ 0.74
CUL4A-208ENST00000474116 POLGP54098 1239 aaPredicted RBP19.68■□□□□ 0.74
CUL4A-208ENST00000474116 BMS1Q14692 1282 aaKnown RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms