RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 RARRES1P49788 294 aa21.14■□□□□ 0.97
PTCD3-210ENST00000473829 ECM1Q16610 540 aa21.14■□□□□ 0.97
PTCD3-210ENST00000473829 HSCBQ8IWL3 235 aa21.14■□□□□ 0.97
PTCD3-210ENST00000473829 IGSF22Q8N9C0 903 aa21.14■□□□□ 0.97
PTCD3-210ENST00000473829 NLRP7Q8WX94 980 aa21.14■□□□□ 0.97
PTCD3-210ENST00000473829 TMEM143Q96AN5 459 aa21.14■□□□□ 0.97
PTCD3-210ENST00000473829 JPH2Q9BR39 696 aaPredicted RBP21.14■□□□□ 0.97
PTCD3-210ENST00000473829 FTHL17Q9BXU8 183 aa21.14■□□□□ 0.97
PTCD3-210ENST00000473829 TSPYL2Q9H2G4 693 aaPredicted RBP21.14■□□□□ 0.97
PTCD3-210ENST00000473829 ANKEF1Q9NU02 776 aa21.14■□□□□ 0.97
PTCD3-210ENST00000473829 A0A087WZ62 844 aa21.13■□□□□ 0.97
PTCD3-210ENST00000473829 LAD1O00515 517 aa21.13■□□□□ 0.97
PTCD3-210ENST00000473829 CSDE1O75534 798 aaKnown RBP21.13■□□□□ 0.97
PTCD3-210ENST00000473829 DARSP14868 501 aaKnown RBP21.13■□□□□ 0.97
PTCD3-210ENST00000473829 FGFR4P22455 802 aa21.13■□□□□ 0.97
PTCD3-210ENST00000473829 EIF4BP23588 611 aaKnown RBP21.13■□□□□ 0.97
PTCD3-210ENST00000473829 RPA1P27694 616 aa21.13■□□□□ 0.97
PTCD3-210ENST00000473829 DNM2P50570 870 aa21.13■□□□□ 0.97
PTCD3-210ENST00000473829 RESTQ13127 1097 aa21.13■□□□□ 0.97
PTCD3-210ENST00000473829 BRAPQ7Z569 592 aa21.13■□□□□ 0.97
PTCD3-210ENST00000473829 RHPN2Q8IUC4 686 aa21.13■□□□□ 0.97
PTCD3-210ENST00000473829 SCLT1Q96NL6 688 aa21.13■□□□□ 0.97
PTCD3-210ENST00000473829 FDXACB1Q9BRP7 624 aaPredicted RBP21.13■□□□□ 0.97
PTCD3-210ENST00000473829 CERS4Q9HA82 394 aa21.13■□□□□ 0.97
PTCD3-210ENST00000473829 LRWD1Q9UFC0 647 aa21.13■□□□□ 0.97
PTCD3-210ENST00000473829 STXBP5LQ9Y2K9 1186 aa21.13■□□□□ 0.97
PTCD3-210ENST00000473829 MYO9BQ13459 2157 aa21.13■□□□□ 0.97
PTCD3-210ENST00000473829 LINC01553A4QN01 128 aa21.12■□□□□ 0.97
PTCD3-210ENST00000473829 EPOPA6NHQ4 379 aa21.12■□□□□ 0.97
PTCD3-210ENST00000473829 GPR182O15218 404 aa21.12■□□□□ 0.97
PTCD3-210ENST00000473829 CRIPAKQ8N1N5 446 aa21.12■□□□□ 0.97
PTCD3-210ENST00000473829 ZNF710Q8N1W2 664 aa21.12■□□□□ 0.97
PTCD3-210ENST00000473829 ERMNQ8TAM6 284 aa21.12■□□□□ 0.97
PTCD3-210ENST00000473829 SP7Q8TDD2 431 aaPredicted RBP21.12■□□□□ 0.97
PTCD3-210ENST00000473829 NLRP4Q96MN2 994 aa21.12■□□□□ 0.97
PTCD3-210ENST00000473829 RC3H2Q9HBD1 1191 aaKnown RBP21.12■□□□□ 0.97
PTCD3-210ENST00000473829 MTMR6Q9Y217 621 aa21.12■□□□□ 0.97
PTCD3-210ENST00000473829 TRANK1O15050 2925 aa21.12■□□□□ 0.97
PTCD3-210ENST00000473829 NLRC5Q86WI3 1866 aa21.11■□□□□ 0.97
PTCD3-210ENST00000473829 CDC25AP30304 524 aa21.11■□□□□ 0.97
PTCD3-210ENST00000473829 CCT6AP40227 531 aaKnown RBP21.11■□□□□ 0.97
PTCD3-210ENST00000473829 PDIA5Q14554 519 aa21.11■□□□□ 0.97
PTCD3-210ENST00000473829 DSC3Q14574 896 aa21.11■□□□□ 0.97
PTCD3-210ENST00000473829 HAUS3Q68CZ6 603 aa21.11■□□□□ 0.97
PTCD3-210ENST00000473829 PRPF31Q8WWY3 499 aaKnown RBP21.11■□□□□ 0.97
PTCD3-210ENST00000473829 YME1L1Q96TA2 773 aa21.11■□□□□ 0.97
PTCD3-210ENST00000473829 MTRQ99707 1265 aa21.11■□□□□ 0.97
PTCD3-210ENST00000473829 ADAM2Q99965 735 aa21.11■□□□□ 0.97
PTCD3-210ENST00000473829 INSL6Q9Y581 213 aa21.11■□□□□ 0.97
PTCD3-210ENST00000473829 COL4A3BPQ9Y5P4 624 aa21.11■□□□□ 0.97
PTCD3-210ENST00000473829 MYH15Q9Y2K3 1946 aa21.11■□□□□ 0.97
PTCD3-210ENST00000473829 RFXAPO00287 272 aa21.1■□□□□ 0.97
PTCD3-210ENST00000473829 GAS2O43903 313 aaKnown RBP21.1■□□□□ 0.97
PTCD3-210ENST00000473829 USO1O60763 962 aaKnown RBP21.1■□□□□ 0.97
PTCD3-210ENST00000473829 XRCC6P12956 609 aaKnown RBP eCLIP21.1■□□□□ 0.97
PTCD3-210ENST00000473829 ADGRE1Q14246 886 aa21.1■□□□□ 0.97
PTCD3-210ENST00000473829 FAM173BQ6P4H8 233 aa21.1■□□□□ 0.97
PTCD3-210ENST00000473829 DTHD1Q6ZMT9 781 aa21.1■□□□□ 0.97
PTCD3-210ENST00000473829 ZNF410Q86VK4 478 aa21.1■□□□□ 0.97
PTCD3-210ENST00000473829 EXOC8Q8IYI6 725 aa21.1■□□□□ 0.97
PTCD3-210ENST00000473829 SNX29Q8TEQ0 813 aa21.1■□□□□ 0.97
PTCD3-210ENST00000473829 PSPC1Q8WXF1 523 aaKnown RBP21.1■□□□□ 0.97
PTCD3-210ENST00000473829 MMTAG2Q9BU76 263 aaKnown RBP21.1■□□□□ 0.97
PTCD3-210ENST00000473829 GCOM2Q9BZD3 368 aaPredicted RBP21.1■□□□□ 0.97
PTCD3-210ENST00000473829 ATP6V0A4Q9HBG4 840 aa21.1■□□□□ 0.97
PTCD3-210ENST00000473829 IFT122Q9HBG6 1241 aa21.1■□□□□ 0.97
PTCD3-210ENST00000473829 RGS18Q9NS28 235 aa21.1■□□□□ 0.97
PTCD3-210ENST00000473829 DBR1Q9UK59 544 aaKnown RBP21.1■□□□□ 0.97
PTCD3-210ENST00000473829 KIAA1671Q9BY89 1806 aa21.09■□□□□ 0.97
PTCD3-210ENST00000473829 DGAT1O75907 488 aa21.09■□□□□ 0.97
PTCD3-210ENST00000473829 FOSL2P15408 326 aa21.09■□□□□ 0.97
PTCD3-210ENST00000473829 LAMTOR4Q0VGL1 99 aa21.09■□□□□ 0.97
PTCD3-210ENST00000473829 ODR4Q5SWX8 454 aa21.09■□□□□ 0.97
PTCD3-210ENST00000473829 NPAS4Q8IUM7 802 aa21.09■□□□□ 0.97
PTCD3-210ENST00000473829 TCP11Q8WWU5 503 aa21.09■□□□□ 0.97
PTCD3-210ENST00000473829 ARNTL2Q8WYA1 636 aa21.09■□□□□ 0.97
PTCD3-210ENST00000473829 CCDC43Q96MW1 224 aaKnown RBP21.09■□□□□ 0.97
PTCD3-210ENST00000473829 NACC1Q96RE7 527 aa21.09■□□□□ 0.97
PTCD3-210ENST00000473829 RAB34Q9BZG1 259 aa21.09■□□□□ 0.97
PTCD3-210ENST00000473829 PRUNE2Q8WUY3 3088 aa21.09■□□□□ 0.97
PTCD3-210ENST00000473829 REV3LO60673 3130 aa21.08■□□□□ 0.97
PTCD3-210ENST00000473829 DENND3A2RUS2 1198 aa21.08■□□□□ 0.97
PTCD3-210ENST00000473829 VWA3AA6NCI4 1184 aa21.08■□□□□ 0.97
PTCD3-210ENST00000473829 C9IYK1 514 aa21.08■□□□□ 0.97
PTCD3-210ENST00000473829 STX6O43752 255 aa21.08■□□□□ 0.97
PTCD3-210ENST00000473829 DGKIO75912 1065 aa21.08■□□□□ 0.97
PTCD3-210ENST00000473829 IBSPP21815 317 aaPredicted RBP21.08■□□□□ 0.97
PTCD3-210ENST00000473829 SARSP49591 514 aaKnown RBP21.08■□□□□ 0.97
PTCD3-210ENST00000473829 CDC42EP1Q00587 391 aa21.08■□□□□ 0.97
PTCD3-210ENST00000473829 SF3A1Q15459 793 aaKnown RBP21.08■□□□□ 0.97
PTCD3-210ENST00000473829 RALGAPA2Q2PPJ7 1873 aa21.08■□□□□ 0.97
PTCD3-210ENST00000473829 ASAP3Q8TDY4 903 aa21.08■□□□□ 0.97
PTCD3-210ENST00000473829 ZNF689Q96CS4 500 aaPredicted RBP21.08■□□□□ 0.97
PTCD3-210ENST00000473829 C17orf80Q9BSJ5 609 aa21.08■□□□□ 0.97
PTCD3-210ENST00000473829 MINDY3Q9H8M7 445 aa21.08■□□□□ 0.97
PTCD3-210ENST00000473829 GPRC5CQ9NQ84 441 aa21.08■□□□□ 0.97
PTCD3-210ENST00000473829 MTUS1Q9ULD2 1270 aa21.08■□□□□ 0.97
PTCD3-210ENST00000473829 ADGRA3Q8IWK6 1321 aa21.07■□□□□ 0.96
PTCD3-210ENST00000473829 FNDC1Q4ZHG4 1894 aaPredicted RBP21.07■□□□□ 0.96
PTCD3-210ENST00000473829 SRGAP2CP0DJJ0 459 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms