RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 CYP4A11Q02928 519 aa25.24■■□□□ 1.63
PTP4A1-203ENST00000473334 DSC3Q14574 896 aa25.24■■□□□ 1.63
PTP4A1-203ENST00000473334 SKIV2LQ15477 1246 aaKnown RBP25.24■■□□□ 1.63
PTP4A1-203ENST00000473334 SLC24A5Q71RS6 500 aa25.24■■□□□ 1.63
PTP4A1-203ENST00000473334 ATXN2LQ8WWM7 1075 aaKnown RBP25.24■■□□□ 1.63
PTP4A1-203ENST00000473334 CLP1Q92989 425 aaKnown RBP25.24■■□□□ 1.63
PTP4A1-203ENST00000473334 CEP170P1Q96L14 293 aa25.24■■□□□ 1.63
PTP4A1-203ENST00000473334 TBC1D32Q96NH3 1257 aa25.24■■□□□ 1.63
PTP4A1-203ENST00000473334 KIAA1671Q9BY89 1806 aa25.23■■□□□ 1.63
PTP4A1-203ENST00000473334 C9IYK1 514 aa25.23■■□□□ 1.63
PTP4A1-203ENST00000473334 IBSPP21815 317 aaPredicted RBP25.23■■□□□ 1.63
PTP4A1-203ENST00000473334 YWHABP31946 246 aaKnown RBP25.23■■□□□ 1.63
PTP4A1-203ENST00000473334 MCM7P33993 719 aa25.23■■□□□ 1.63
PTP4A1-203ENST00000473334 TXKP42681 527 aa25.23■■□□□ 1.63
PTP4A1-203ENST00000473334 GPM6BQ13491 265 aa25.23■■□□□ 1.63
PTP4A1-203ENST00000473334 GNL2Q13823 731 aaKnown RBP25.23■■□□□ 1.63
PTP4A1-203ENST00000473334 CTTNQ14247 550 aaKnown RBP25.23■■□□□ 1.63
PTP4A1-203ENST00000473334 OTUD6AQ7L8S5 288 aa25.23■■□□□ 1.63
PTP4A1-203ENST00000473334 EXOC8Q8IYI6 725 aa25.23■■□□□ 1.63
PTP4A1-203ENST00000473334 NEK9Q8TD19 979 aa25.23■■□□□ 1.63
PTP4A1-203ENST00000473334 SLC7A3Q8WY07 619 aa25.23■■□□□ 1.63
PTP4A1-203ENST00000473334 EIF2AK1Q9BQI3 630 aaKnown RBP25.23■■□□□ 1.63
PTP4A1-203ENST00000473334 TMEM60Q9H2L4 133 aa25.23■■□□□ 1.63
PTP4A1-203ENST00000473334 SUCLA2Q9P2R7 463 aaPredicted RBP25.23■■□□□ 1.63
PTP4A1-203ENST00000473334 PCDHB7Q9Y5E2 793 aa25.23■■□□□ 1.63
PTP4A1-203ENST00000473334 C5orf67F2Z3F1 127 aa25.22■■□□□ 1.63
PTP4A1-203ENST00000473334 RB1P06400 928 aa25.22■■□□□ 1.63
PTP4A1-203ENST00000473334 POLGP54098 1239 aaPredicted RBP25.22■■□□□ 1.63
PTP4A1-203ENST00000473334 ORC2Q13416 577 aaPredicted RBP25.22■■□□□ 1.63
PTP4A1-203ENST00000473334 PTPROQ16827 1216 aa25.22■■□□□ 1.63
PTP4A1-203ENST00000473334 COL25A1Q9BXS0 654 aaPredicted RBP25.22■■□□□ 1.63
PTP4A1-203ENST00000473334 GCOM2Q9BZD3 368 aaPredicted RBP25.22■■□□□ 1.63
PTP4A1-203ENST00000473334 FNDC1Q4ZHG4 1894 aaPredicted RBP25.21■■□□□ 1.63
PTP4A1-203ENST00000473334 SLITRK3O94933 977 aa25.21■■□□□ 1.63
PTP4A1-203ENST00000473334 BMPR1AP36894 532 aa25.21■■□□□ 1.63
PTP4A1-203ENST00000473334 RFC5P40937 340 aa25.21■■□□□ 1.63
PTP4A1-203ENST00000473334 PAN2Q504Q3 1202 aaKnown RBP25.21■■□□□ 1.63
PTP4A1-203ENST00000473334 TJAP1Q5JTD0 557 aa25.21■■□□□ 1.63
PTP4A1-203ENST00000473334 ZNF410Q86VK4 478 aa25.21■■□□□ 1.63
PTP4A1-203ENST00000473334 RHPN2Q8IUC4 686 aa25.21■■□□□ 1.63
PTP4A1-203ENST00000473334 NOSTRINQ8IVI9 506 aa25.21■■□□□ 1.63
PTP4A1-203ENST00000473334 TPH2Q8IWU9 490 aa25.21■■□□□ 1.63
PTP4A1-203ENST00000473334 ZNF579Q8NAF0 562 aaKnown RBP25.21■■□□□ 1.63
PTP4A1-203ENST00000473334 MRPL38Q96DV4 380 aaKnown RBP25.21■■□□□ 1.63
PTP4A1-203ENST00000473334 TMX3Q96JJ7 454 aa25.21■■□□□ 1.63
PTP4A1-203ENST00000473334 DHX33Q9H6R0 707 aaKnown RBP25.21■■□□□ 1.63
PTP4A1-203ENST00000473334 KIF3AQ9Y496 699 aa25.21■■□□□ 1.63
PTP4A1-203ENST00000473334 MRPL42Q9Y6G3 142 aaKnown RBP25.21■■□□□ 1.63
PTP4A1-203ENST00000473334 A0A087WZ62 844 aa25.2■■□□□ 1.62
PTP4A1-203ENST00000473334 CD2BP2O95400 341 aaKnown RBP25.2■■□□□ 1.62
PTP4A1-203ENST00000473334 ZSCAN20P17040 1043 aaPredicted RBP25.2■■□□□ 1.62
PTP4A1-203ENST00000473334 MRPS5P82675 430 aaKnown RBP25.2■■□□□ 1.62
PTP4A1-203ENST00000473334 XKR9Q5GH70 373 aa25.2■■□□□ 1.62
PTP4A1-203ENST00000473334 HSD17B14Q9BPX1 270 aa25.2■■□□□ 1.62
PTP4A1-203ENST00000473334 FDXACB1Q9BRP7 624 aaPredicted RBP25.2■■□□□ 1.62
PTP4A1-203ENST00000473334 C11orf84Q9BUA3 381 aaPredicted RBP25.2■■□□□ 1.62
PTP4A1-203ENST00000473334 ELAC1Q9H777 363 aaKnown RBP25.2■■□□□ 1.62
PTP4A1-203ENST00000473334 TMEM161AQ9NX61 479 aa25.2■■□□□ 1.62
PTP4A1-203ENST00000473334 POTEMA6NI47 508 aa25.19■■□□□ 1.62
PTP4A1-203ENST00000473334 GAS2O43903 313 aaKnown RBP25.19■■□□□ 1.62
PTP4A1-203ENST00000473334 LYPLA2O95372 231 aa25.19■■□□□ 1.62
PTP4A1-203ENST00000473334 FGFR4P22455 802 aa25.19■■□□□ 1.62
PTP4A1-203ENST00000473334 TRAPPC10P48553 1259 aa25.19■■□□□ 1.62
PTP4A1-203ENST00000473334 MCM2P49736 904 aa25.19■■□□□ 1.62
PTP4A1-203ENST00000473334 GATMP50440 423 aa25.19■■□□□ 1.62
PTP4A1-203ENST00000473334 FAM189BP81408 668 aa25.19■■□□□ 1.62
PTP4A1-203ENST00000473334 TTC38Q5R3I4 469 aa25.19■■□□□ 1.62
PTP4A1-203ENST00000473334 SYMPKQ92797 1274 aaKnown RBP25.19■■□□□ 1.62
PTP4A1-203ENST00000473334 ASB2Q96Q27 587 aa25.19■■□□□ 1.62
PTP4A1-203ENST00000473334 PLVAPQ9BX97 442 aa25.19■■□□□ 1.62
PTP4A1-203ENST00000473334 INO80BQ9C086 356 aaPredicted RBP25.19■■□□□ 1.62
PTP4A1-203ENST00000473334 NOL7Q9UMY1 257 aaKnown RBP25.19■■□□□ 1.62
PTP4A1-203ENST00000473334 COG5Q9UP83 839 aa25.19■■□□□ 1.62
PTP4A1-203ENST00000473334 ZBTB39O15060 712 aa25.18■■□□□ 1.62
PTP4A1-203ENST00000473334 U2AF2P26368 475 aaKnown RBP eCLIP25.18■■□□□ 1.622e-41■■■□□ 17
PTP4A1-203ENST00000473334 ZNF174Q15697 407 aa25.18■■□□□ 1.62
PTP4A1-203ENST00000473334 PSPC1Q8WXF1 523 aaKnown RBP25.18■■□□□ 1.62
PTP4A1-203ENST00000473334 NLRP4Q96MN2 994 aa25.18■■□□□ 1.62
PTP4A1-203ENST00000473334 ATP6V0A4Q9HBG4 840 aa25.18■■□□□ 1.62
PTP4A1-203ENST00000473334 COL4A3BPQ9Y5P4 624 aa25.18■■□□□ 1.62
PTP4A1-203ENST00000473334 VCANP13611 3396 aa25.18■■□□□ 1.62
PTP4A1-203ENST00000473334 XIRP2A4UGR9 3374 aa25.17■■□□□ 1.62
PTP4A1-203ENST00000473334 CSDE1O75534 798 aaKnown RBP25.17■■□□□ 1.62
PTP4A1-203ENST00000473334 OR52Z1P0C646 297 aa25.17■■□□□ 1.62
PTP4A1-203ENST00000473334 SFPQP23246 707 aaKnown RBP eCLIP25.17■■□□□ 1.628e-11■□□□□ 10.5
PTP4A1-203ENST00000473334 EMC2Q15006 297 aa25.17■■□□□ 1.62
PTP4A1-203ENST00000473334 TIGD5Q53EQ6 642 aa25.17■■□□□ 1.62
PTP4A1-203ENST00000473334 KSR1Q8IVT5 923 aa25.17■■□□□ 1.62
PTP4A1-203ENST00000473334 LMAN2LQ9H0V9 348 aa25.17■■□□□ 1.62
PTP4A1-203ENST00000473334 BMP2KQ9NSY1 1161 aaPredicted RBP25.17■■□□□ 1.62
PTP4A1-203ENST00000473334 ANKEF1Q9NU02 776 aa25.17■■□□□ 1.62
PTP4A1-203ENST00000473334 ATG2AQ2TAZ0 1938 aa25.17■■□□□ 1.62
PTP4A1-203ENST00000473334 SPTBN5Q9NRC6 3674 aaKnown RBP25.16■■□□□ 1.62
PTP4A1-203ENST00000473334 TBKBP1A7MCY6 615 aa25.16■■□□□ 1.62
PTP4A1-203ENST00000473334 AAK1Q2M2I8 961 aa25.16■■□□□ 1.62
PTP4A1-203ENST00000473334 FAM102BQ5T8I3 360 aa25.16■■□□□ 1.62
PTP4A1-203ENST00000473334 TCP11Q8WWU5 503 aa25.16■■□□□ 1.62
PTP4A1-203ENST00000473334 P2RX5Q93086 422 aa25.16■■□□□ 1.62
PTP4A1-203ENST00000473334 HLA-CQ95604 372 aa25.16■■□□□ 1.62
PTP4A1-203ENST00000473334 TMEM143Q96AN5 459 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms