RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 CYP11B2P19099 503 aa23.11■■□□□ 1.29
TOP3A-204ENST00000472959 ME1P48163 572 aa23.11■■□□□ 1.29
TOP3A-204ENST00000472959 GPC3P51654 580 aa23.11■■□□□ 1.29
TOP3A-204ENST00000472959 SPECC1Q5M775 1068 aa23.11■■□□□ 1.29
TOP3A-204ENST00000472959 C9orf50Q5SZB4 431 aa23.11■■□□□ 1.29
TOP3A-204ENST00000472959 TSHZ1Q6ZSZ6 1077 aa23.11■■□□□ 1.29
TOP3A-204ENST00000472959 ZNF410Q86VK4 478 aa23.11■■□□□ 1.29
TOP3A-204ENST00000472959 PRPF31Q8WWY3 499 aaKnown RBP23.11■■□□□ 1.29
TOP3A-204ENST00000472959 APBB2Q92870 758 aa23.11■■□□□ 1.29
TOP3A-204ENST00000472959 SCAND2PQ9GZW5 306 aaPredicted RBP23.11■■□□□ 1.29
TOP3A-204ENST00000472959 EFCAB14O75071 495 aa23.1■■□□□ 1.29
TOP3A-204ENST00000472959 BAIAP3O94812 1187 aa23.1■■□□□ 1.29
TOP3A-204ENST00000472959 MXD4Q14582 209 aaPredicted RBP23.1■■□□□ 1.29
TOP3A-204ENST00000472959 KARSQ15046 597 aaKnown RBP23.1■■□□□ 1.29
TOP3A-204ENST00000472959 ODR4Q5SWX8 454 aa23.1■■□□□ 1.29
TOP3A-204ENST00000472959 USP49Q70CQ1 688 aa23.1■■□□□ 1.29
TOP3A-204ENST00000472959 OTOP2Q7RTS6 562 aa23.1■■□□□ 1.29
TOP3A-204ENST00000472959 KCNK18Q7Z418 384 aa23.1■■□□□ 1.29
TOP3A-204ENST00000472959 RHPN2Q8IUC4 686 aa23.1■■□□□ 1.29
TOP3A-204ENST00000472959 DBF4BQ8NFT6 615 aa23.1■■□□□ 1.29
TOP3A-204ENST00000472959 RNPC3Q96LT9 517 aaKnown RBP23.1■■□□□ 1.29
TOP3A-204ENST00000472959 SCLT1Q96NL6 688 aa23.1■■□□□ 1.29
TOP3A-204ENST00000472959 PLIN2Q99541 437 aa23.1■■□□□ 1.29
TOP3A-204ENST00000472959 IFIH1Q9BYX4 1025 aaKnown RBP23.1■■□□□ 1.29
TOP3A-204ENST00000472959 CDHR5Q9HBB8 845 aa23.1■■□□□ 1.29
TOP3A-204ENST00000472959 BMP2KQ9NSY1 1161 aaPredicted RBP23.1■■□□□ 1.29
TOP3A-204ENST00000472959 COL4A3BPQ9Y5P4 624 aa23.1■■□□□ 1.29
TOP3A-204ENST00000472959 TANC1Q9C0D5 1861 aa23.1■■□□□ 1.29
TOP3A-204ENST00000472959 ABHD14A-ACY1A0A1B0GW23 586 aa23.09■■□□□ 1.29
TOP3A-204ENST00000472959 ARL2P36404 184 aa23.09■■□□□ 1.29
TOP3A-204ENST00000472959 IKBKEQ14164 716 aa23.09■■□□□ 1.29
TOP3A-204ENST00000472959 AXDND1Q5T1B0 1012 aaPredicted RBP23.09■■□□□ 1.29
TOP3A-204ENST00000472959 RASIP1Q5U651 963 aa23.09■■□□□ 1.29
TOP3A-204ENST00000472959 SYT2Q8N9I0 419 aaPredicted RBP23.09■■□□□ 1.29
TOP3A-204ENST00000472959 LEO1Q8WVC0 666 aaPredicted RBP23.09■■□□□ 1.29
TOP3A-204ENST00000472959 NLRP7Q8WX94 980 aa23.09■■□□□ 1.29
TOP3A-204ENST00000472959 SPATA32Q96LK8 384 aa23.09■■□□□ 1.29
TOP3A-204ENST00000472959 PPP1R16BQ96T49 567 aa23.09■■□□□ 1.29
TOP3A-204ENST00000472959 OSMRQ99650 979 aa23.09■■□□□ 1.29
TOP3A-204ENST00000472959 GCOM2Q9BZD3 368 aaPredicted RBP23.09■■□□□ 1.29
TOP3A-204ENST00000472959 OSBPL7Q9BZF2 842 aa23.09■■□□□ 1.29
TOP3A-204ENST00000472959 PCDHA7Q9UN72 937 aa23.09■■□□□ 1.29
TOP3A-204ENST00000472959 RPS6KA5O75582 802 aa23.08■■□□□ 1.29
TOP3A-204ENST00000472959 PLA2G4BP0C869 781 aa23.08■■□□□ 1.29
TOP3A-204ENST00000472959 PLCG1P19174 1290 aa23.08■■□□□ 1.29
TOP3A-204ENST00000472959 EIF4BP23588 611 aaKnown RBP23.08■■□□□ 1.29
TOP3A-204ENST00000472959 LAMTOR4Q0VGL1 99 aa23.08■■□□□ 1.29
TOP3A-204ENST00000472959 AGO3Q9H9G7 860 aaKnown RBP23.08■■□□□ 1.29
TOP3A-204ENST00000472959 KCND2Q9NZV8 630 aa23.08■■□□□ 1.29
TOP3A-204ENST00000472959 GPR182O15218 404 aa23.07■■□□□ 1.28
TOP3A-204ENST00000472959 DARSP14868 501 aaKnown RBP23.07■■□□□ 1.28
TOP3A-204ENST00000472959 PAK2Q13177 524 aa23.07■■□□□ 1.28
TOP3A-204ENST00000472959 TFDP1Q14186 410 aa23.07■■□□□ 1.28
TOP3A-204ENST00000472959 FAM102BQ5T8I3 360 aa23.07■■□□□ 1.28
TOP3A-204ENST00000472959 RRAGBQ5VZM2 374 aa23.07■■□□□ 1.28
TOP3A-204ENST00000472959 CCDC73Q6ZRK6 1079 aa23.07■■□□□ 1.28
TOP3A-204ENST00000472959 TMEM40Q8WWA1 233 aa23.07■■□□□ 1.28
TOP3A-204ENST00000472959 NLRP4Q96MN2 994 aa23.07■■□□□ 1.28
TOP3A-204ENST00000472959 TIPINQ9BVW5 301 aa23.07■■□□□ 1.28
TOP3A-204ENST00000472959 INO80BQ9C086 356 aaPredicted RBP23.07■■□□□ 1.28
TOP3A-204ENST00000472959 POLR3FQ9H1D9 316 aaPredicted RBP23.07■■□□□ 1.28
TOP3A-204ENST00000472959 CHMP5Q9NZZ3 219 aa23.07■■□□□ 1.28
TOP3A-204ENST00000472959 STK17AQ9UEE5 414 aa23.07■■□□□ 1.28
TOP3A-204ENST00000472959 PADI3Q9ULW8 664 aa23.07■■□□□ 1.28
TOP3A-204ENST00000472959 NOC2LQ9Y3T9 749 aaKnown RBP23.07■■□□□ 1.28
TOP3A-204ENST00000472959 SSBP05455 408 aaKnown RBP eCLIP23.06■■□□□ 1.28
TOP3A-204ENST00000472959 CD52P31358 61 aa23.06■■□□□ 1.28
TOP3A-204ENST00000472959 SLC12A3P55017 1021 aa23.06■■□□□ 1.28
TOP3A-204ENST00000472959 POU5F1BQ06416 359 aa23.06■■□□□ 1.28
TOP3A-204ENST00000472959 RINT1Q6NUQ1 792 aa23.06■■□□□ 1.28
TOP3A-204ENST00000472959 SHC4Q6S5L8 630 aa23.06■■□□□ 1.28
TOP3A-204ENST00000472959 C1orf186Q6ZWK4 172 aa23.06■■□□□ 1.28
TOP3A-204ENST00000472959 MAEAQ7L5Y9 396 aa23.06■■□□□ 1.28
TOP3A-204ENST00000472959 KSR1Q8IVT5 923 aa23.06■■□□□ 1.28
TOP3A-204ENST00000472959 RAD54LQ92698 747 aa23.06■■□□□ 1.28
TOP3A-204ENST00000472959 KIFAP3Q92845 792 aa23.06■■□□□ 1.28
TOP3A-204ENST00000472959 CHAMP1Q96JM3 812 aa23.06■■□□□ 1.28
TOP3A-204ENST00000472959 FTHL17Q9BXU8 183 aa23.06■■□□□ 1.28
TOP3A-204ENST00000472959 BLOC1S4Q9NUP1 217 aa23.06■■□□□ 1.28
TOP3A-204ENST00000472959 SLC4A7Q9Y6M7 1214 aa23.06■■□□□ 1.28
TOP3A-204ENST00000472959 MYH15Q9Y2K3 1946 aa23.06■■□□□ 1.28
TOP3A-204ENST00000472959 EVPLQ92817 2033 aa23.05■■□□□ 1.28
TOP3A-204ENST00000472959 A0A087WZ62 844 aa23.05■■□□□ 1.28
TOP3A-204ENST00000472959 ZBBXA8MT70 800 aa23.05■■□□□ 1.28
TOP3A-204ENST00000472959 SRGAP2CP0DJJ0 459 aa23.05■■□□□ 1.28
TOP3A-204ENST00000472959 GUCY2CP25092 1073 aa23.05■■□□□ 1.28
TOP3A-204ENST00000472959 TCTN1Q2MV58 587 aa23.05■■□□□ 1.28
TOP3A-204ENST00000472959 RNF149Q8NC42 400 aa23.05■■□□□ 1.28
TOP3A-204ENST00000472959 ZNF668Q96K58 619 aaPredicted RBP23.05■■□□□ 1.28
TOP3A-204ENST00000472959 IPO9Q96P70 1041 aaKnown RBP23.05■■□□□ 1.28
TOP3A-204ENST00000472959 FDXACB1Q9BRP7 624 aaPredicted RBP23.05■■□□□ 1.28
TOP3A-204ENST00000472959 RUSC1Q9BVN2 902 aa23.05■■□□□ 1.28
TOP3A-204ENST00000472959 ERVK-5Q9HDB9 667 aa23.05■■□□□ 1.28
TOP3A-204ENST00000472959 GPRC5CQ9NQ84 441 aa23.05■■□□□ 1.28
TOP3A-204ENST00000472959 CXXC1Q9P0U4 656 aaPredicted RBP23.05■■□□□ 1.28
TOP3A-204ENST00000472959 GLRA2P23416 452 aa23.04■■□□□ 1.28
TOP3A-204ENST00000472959 PHKA2P46019 1235 aa23.04■■□□□ 1.28
TOP3A-204ENST00000472959 KCNJ6P48051 423 aa23.04■■□□□ 1.28
TOP3A-204ENST00000472959 NFX1Q12986 1120 aaKnown RBP23.04■■□□□ 1.28
TOP3A-204ENST00000472959 LRIT3Q3SXY7 679 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms