RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 CCT8L1PA6NM43 557 aa11□□□□□ -0.65
APTX-216ENST00000472896 ORC4O43929 436 aa11□□□□□ -0.65
APTX-216ENST00000472896 ALADP13716 330 aa11□□□□□ -0.65
APTX-216ENST00000472896 FOSL2P15408 326 aa11□□□□□ -0.65
APTX-216ENST00000472896 ITGB8P26012 769 aa11□□□□□ -0.65
APTX-216ENST00000472896 LIFRP42702 1097 aa11□□□□□ -0.65
APTX-216ENST00000472896 AFMP43652 599 aa11□□□□□ -0.65
APTX-216ENST00000472896 RPS6KA3P51812 740 aa11□□□□□ -0.65
APTX-216ENST00000472896 SLC7A5Q01650 507 aa11□□□□□ -0.65
APTX-216ENST00000472896 ITIH4Q14624 930 aa11□□□□□ -0.65
APTX-216ENST00000472896 SLC5A9Q2M3M2 681 aa11□□□□□ -0.65
APTX-216ENST00000472896 USP17L2Q6R6M4 530 aa11□□□□□ -0.65
APTX-216ENST00000472896 MAPKAPK5Q8IW41 473 aa11□□□□□ -0.65
APTX-216ENST00000472896 TRIM22Q8IYM9 498 aa11□□□□□ -0.65
APTX-216ENST00000472896 ANKS4BQ8N8V4 417 aa11□□□□□ -0.65
APTX-216ENST00000472896 SPATA5Q8NB90 893 aa11□□□□□ -0.65
APTX-216ENST00000472896 TGFBRAP1Q8WUH2 860 aa11□□□□□ -0.65
APTX-216ENST00000472896 NEUROD6Q96NK8 337 aa11□□□□□ -0.65
APTX-216ENST00000472896 PRDM5Q9NQX1 630 aaPredicted RBP11□□□□□ -0.65
APTX-216ENST00000472896 BTBD7Q9P203 1132 aa11□□□□□ -0.65
APTX-216ENST00000472896 MAGEC2Q9UBF1 373 aaPredicted RBP11□□□□□ -0.65
APTX-216ENST00000472896 BAIAP2L1Q9UHR4 511 aa11□□□□□ -0.65
APTX-216ENST00000472896 ZBTB21Q9ULJ3 1066 aa11□□□□□ -0.65
APTX-216ENST00000472896 TTC28Q96AY4 2481 aa11□□□□□ -0.65
APTX-216ENST00000472896 RLFQ13129 1914 aa11□□□□□ -0.65
APTX-216ENST00000472896 VCANP13611 3396 aa11□□□□□ -0.65
APTX-216ENST00000472896 EME2A4GXA9 379 aaPredicted RBP11□□□□□ -0.65
APTX-216ENST00000472896 RCCD1A6NED2 376 aa11□□□□□ -0.65
APTX-216ENST00000472896 TTC36A6NLP5 189 aa11□□□□□ -0.65
APTX-216ENST00000472896 BTBD18B2RXH4 712 aa11□□□□□ -0.65
APTX-216ENST00000472896 ABLIM1O14639 778 aa11□□□□□ -0.65
APTX-216ENST00000472896 LCA5LO95447 670 aa11□□□□□ -0.65
APTX-216ENST00000472896 ANP32DO95626 131 aa11□□□□□ -0.65
APTX-216ENST00000472896 HOXC6P09630 235 aa11□□□□□ -0.65
APTX-216ENST00000472896 FERP16591 822 aa11□□□□□ -0.65
APTX-216ENST00000472896 IBSPP21815 317 aaPredicted RBP11□□□□□ -0.65
APTX-216ENST00000472896 CCND1P24385 295 aa11□□□□□ -0.65
APTX-216ENST00000472896 HAND2P61296 217 aa11□□□□□ -0.65
APTX-216ENST00000472896 PPP2R2AP63151 447 aa11□□□□□ -0.65
APTX-216ENST00000472896 MTMR3Q13615 1198 aa11□□□□□ -0.65
APTX-216ENST00000472896 BYSLQ13895 437 aaKnown RBP11□□□□□ -0.65
APTX-216ENST00000472896 ZNF268Q14587 947 aaPredicted RBP11□□□□□ -0.65
APTX-216ENST00000472896 KCNB1Q14721 858 aa11□□□□□ -0.65
APTX-216ENST00000472896 IFI16Q16666 785 aaKnown RBP11□□□□□ -0.65
APTX-216ENST00000472896 TRIM60Q495X7 471 aa11□□□□□ -0.65
APTX-216ENST00000472896 WDR78Q5VTH9 848 aa11□□□□□ -0.65
APTX-216ENST00000472896 RAB11FIP4Q86YS3 637 aa11□□□□□ -0.65
APTX-216ENST00000472896 CCDC197Q8NCU1 140 aa11□□□□□ -0.65
APTX-216ENST00000472896 SYMPKQ92797 1274 aaKnown RBP11□□□□□ -0.65
APTX-216ENST00000472896 PHKBQ93100 1093 aa11□□□□□ -0.65
APTX-216ENST00000472896 TTYH3Q9C0H2 523 aa11□□□□□ -0.65
APTX-216ENST00000472896 DHX36Q9H2U1 1008 aaKnown RBP11□□□□□ -0.65
APTX-216ENST00000472896 SENP2Q9HC62 589 aa11□□□□□ -0.65
APTX-216ENST00000472896 PDLIM7Q9NR12 457 aa11□□□□□ -0.65
APTX-216ENST00000472896 SLC12A4Q9UP95 1085 aa11□□□□□ -0.65
APTX-216ENST00000472896 PLAAQ9Y263 795 aa11□□□□□ -0.65
APTX-216ENST00000472896 PCDHB6Q9Y5E3 794 aa11□□□□□ -0.65
APTX-216ENST00000472896 MACROD2A1Z1Q3 448 aa10.99□□□□□ -0.65
APTX-216ENST00000472896 FOXP2O15409 715 aa10.99□□□□□ -0.65
APTX-216ENST00000472896 PJA2O43164 708 aa10.99□□□□□ -0.65
APTX-216ENST00000472896 RANBP6O60518 1105 aaKnown RBP10.99□□□□□ -0.65
APTX-216ENST00000472896 HEXIM1O94992 359 aaKnown RBP10.99□□□□□ -0.65
APTX-216ENST00000472896 CYBAP13498 195 aa10.99□□□□□ -0.65
APTX-216ENST00000472896 HNRNPH3P31942 346 aaKnown RBP10.99□□□□□ -0.65
APTX-216ENST00000472896 RAB27AP51159 221 aa10.99□□□□□ -0.65
APTX-216ENST00000472896 CCNG1P51959 295 aa10.99□□□□□ -0.65
APTX-216ENST00000472896 MYO1EQ12965 1108 aa10.99□□□□□ -0.65
APTX-216ENST00000472896 BLMHQ13867 455 aa10.99□□□□□ -0.65
APTX-216ENST00000472896 GRIN2CQ14957 1233 aa10.99□□□□□ -0.65
APTX-216ENST00000472896 SEPT2Q15019 361 aa10.99□□□□□ -0.65
APTX-216ENST00000472896 PPP1R7Q15435 360 aa10.99□□□□□ -0.65
APTX-216ENST00000472896 ZYXQ15942 572 aaKnown RBP10.99□□□□□ -0.65
APTX-216ENST00000472896 ACCSLQ4AC99 568 aa10.99□□□□□ -0.65
APTX-216ENST00000472896 HIBCHQ6NVY1 386 aaPredicted RBP10.99□□□□□ -0.65
APTX-216ENST00000472896 MAATS1Q7Z4T9 603 aa10.99□□□□□ -0.65
APTX-216ENST00000472896 CPLX4Q7Z7G2 160 aa10.99□□□□□ -0.65
APTX-216ENST00000472896 RNF10Q8N5U6 811 aaKnown RBP10.99□□□□□ -0.65
APTX-216ENST00000472896 GTF3C2Q8WUA4 911 aaPredicted RBP10.99□□□□□ -0.65
APTX-216ENST00000472896 STAMBPL1Q96FJ0 436 aa10.99□□□□□ -0.65
APTX-216ENST00000472896 CCDC42Q96M95 316 aa10.99□□□□□ -0.65
APTX-216ENST00000472896 SLC26A6Q9BXS9 759 aa10.99□□□□□ -0.65
APTX-216ENST00000472896 EPB41L5Q9HCM4 733 aa10.99□□□□□ -0.65
APTX-216ENST00000472896 SAP30BPQ9UHR5 308 aaKnown RBP10.99□□□□□ -0.65
APTX-216ENST00000472896 NFU1Q9UMS0 254 aa10.99□□□□□ -0.65
APTX-216ENST00000472896 SH3BP1Q9Y3L3 701 aa10.99□□□□□ -0.65
APTX-216ENST00000472896 A6NHS1 94 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 USP17L15C9J2P7 530 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 USP17L13C9JLJ4 530 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 USP17L11C9JVI0 530 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 USP17L18D6R9N7 530 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 USP17L22D6RA61 530 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 USP17L17D6RBQ6 530 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 USP17L19D6RCP7 530 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 USP17L20D6RJB6 530 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 TNFRSF10AO00220 468 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 ASAP2O43150 1006 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 MSCO60682 206 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 DEXIO95424 95 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 GH2P01242 217 aa10.98□□□□□ -0.65
APTX-216ENST00000472896 DRD4P21917 467 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms