RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 KIR3DL1P43629 444 aa4.26□□□□□ -1.73
XRN1-209ENST00000472625 RFX5P48382 616 aaPredicted RBP4.26□□□□□ -1.73
XRN1-209ENST00000472625 USP14P54578 494 aa4.26□□□□□ -1.73
XRN1-209ENST00000472625 APOBRQ0VD83 1088 aa4.26□□□□□ -1.73
XRN1-209ENST00000472625 PICALMQ13492 652 aa4.26□□□□□ -1.73
XRN1-209ENST00000472625 MTX1Q13505 466 aa4.26□□□□□ -1.73
XRN1-209ENST00000472625 MOGSQ13724 837 aa4.26□□□□□ -1.73
XRN1-209ENST00000472625 RASGRF1Q13972 1273 aa4.26□□□□□ -1.73
XRN1-209ENST00000472625 LRIT3Q3SXY7 679 aa4.26□□□□□ -1.73
XRN1-209ENST00000472625 ARSHQ5FYA8 562 aa4.26□□□□□ -1.73
XRN1-209ENST00000472625 GK5Q6ZS86 529 aa4.26□□□□□ -1.73
XRN1-209ENST00000472625 CRACR2BQ8N4Y2 399 aaPredicted RBP4.26□□□□□ -1.73
XRN1-209ENST00000472625 ANKRD13CQ8N6S4 541 aa4.26□□□□□ -1.73
XRN1-209ENST00000472625 KLHDC4Q8TBB5 520 aa4.26□□□□□ -1.73
XRN1-209ENST00000472625 RASGRP4Q8TDF6 673 aa4.26□□□□□ -1.73
XRN1-209ENST00000472625 RNF141Q8WVD5 230 aa4.26□□□□□ -1.73
XRN1-209ENST00000472625 TMEM40Q8WWA1 233 aa4.26□□□□□ -1.73
XRN1-209ENST00000472625 SSH1Q8WYL5 1049 aa4.26□□□□□ -1.73
XRN1-209ENST00000472625 ARHGAP45Q92619 1136 aa4.26□□□□□ -1.73
XRN1-209ENST00000472625 UBE2FQ969M7 185 aa4.26□□□□□ -1.73
XRN1-209ENST00000472625 APBA2Q99767 749 aa4.26□□□□□ -1.73
XRN1-209ENST00000472625 GPR62Q9BZJ7 368 aa4.26□□□□□ -1.73
XRN1-209ENST00000472625 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.26□□□□□ -1.73
XRN1-209ENST00000472625 SIL1Q9H173 461 aa4.26□□□□□ -1.73
XRN1-209ENST00000472625 SLAMF8Q9P0V8 285 aa4.26□□□□□ -1.73
XRN1-209ENST00000472625 ZSWIM5Q9P217 1185 aa4.26□□□□□ -1.73
XRN1-209ENST00000472625 PI4KBQ9UBF8 816 aa4.26□□□□□ -1.73
XRN1-209ENST00000472625 UNC80Q8N2C7 3258 aa4.26□□□□□ -1.73
XRN1-209ENST00000472625 VCANP13611 3396 aa4.25□□□□□ -1.73
XRN1-209ENST00000472625 A0A1B0GUL7 405 aa4.25□□□□□ -1.73
XRN1-209ENST00000472625 EFEMP2O95967 443 aa4.25□□□□□ -1.73
XRN1-209ENST00000472625 GNAI2P04899 355 aa4.25□□□□□ -1.73
XRN1-209ENST00000472625 NME1P15531 152 aaKnown RBP4.25□□□□□ -1.73
XRN1-209ENST00000472625 HOXA7P31268 230 aaPredicted RBP4.25□□□□□ -1.73
XRN1-209ENST00000472625 PHKA1P46020 1223 aa4.25□□□□□ -1.73
XRN1-209ENST00000472625 SOX9P48436 509 aa4.25□□□□□ -1.73
XRN1-209ENST00000472625 BACE1P56817 501 aa4.25□□□□□ -1.73
XRN1-209ENST00000472625 ERVFC1P60507 584 aa4.25□□□□□ -1.73
XRN1-209ENST00000472625 MECOMQ03112 1051 aa4.25□□□□□ -1.73
XRN1-209ENST00000472625 MESP2Q0VG99 397 aa4.25□□□□□ -1.73
XRN1-209ENST00000472625 PAK2Q13177 524 aa4.25□□□□□ -1.73
XRN1-209ENST00000472625 G3BP1Q13283 466 aaKnown RBP eCLIP4.25□□□□□ -1.73
XRN1-209ENST00000472625 SNW1Q13573 536 aaKnown RBP4.25□□□□□ -1.73
XRN1-209ENST00000472625 CCDC158Q5M9N0 1113 aa4.25□□□□□ -1.73
XRN1-209ENST00000472625 KRTAP5-3Q6L8H2 238 aa4.25□□□□□ -1.73
XRN1-209ENST00000472625 PRR23BQ6ZRT6 265 aa4.25□□□□□ -1.73
XRN1-209ENST00000472625 ATG9AQ7Z3C6 839 aa4.25□□□□□ -1.73
XRN1-209ENST00000472625 THAP5Q7Z6K1 395 aa4.25□□□□□ -1.73
XRN1-209ENST00000472625 NT5DC4Q86YG4 428 aa4.25□□□□□ -1.73
XRN1-209ENST00000472625 KSR1Q8IVT5 923 aa4.25□□□□□ -1.73
XRN1-209ENST00000472625 TEX11Q8IYF3 940 aa4.25□□□□□ -1.73
XRN1-209ENST00000472625 TDHQ8IZJ6 230 aa4.25□□□□□ -1.73
XRN1-209ENST00000472625 SPATA5Q8NB90 893 aa4.25□□□□□ -1.73
XRN1-209ENST00000472625 RBBP8NLQ8NC74 664 aaPredicted RBP4.25□□□□□ -1.73
XRN1-209ENST00000472625 SLC17A8Q8NDX2 589 aa4.25□□□□□ -1.73
XRN1-209ENST00000472625 GPRC5AQ8NFJ5 357 aa4.25□□□□□ -1.73
XRN1-209ENST00000472625 PIWIL2Q8TC59 973 aaKnown RBP4.25□□□□□ -1.73
XRN1-209ENST00000472625 NKD1Q969G9 470 aa4.25□□□□□ -1.73
XRN1-209ENST00000472625 COX4I2Q96KJ9 171 aa4.25□□□□□ -1.73
XRN1-209ENST00000472625 CCDC74BQ96LY2 380 aa4.25□□□□□ -1.73
XRN1-209ENST00000472625 SLC9A7Q96T83 725 aa4.25□□□□□ -1.73
XRN1-209ENST00000472625 PRO3102Q9H379 93 aa4.25□□□□□ -1.73
XRN1-209ENST00000472625 C11orf49Q9H6J7 331 aa4.25□□□□□ -1.73
XRN1-209ENST00000472625 SLC5A4Q9NY91 659 aa4.25□□□□□ -1.73
XRN1-209ENST00000472625 RAI14Q9P0K7 980 aa4.25□□□□□ -1.73
XRN1-209ENST00000472625 LRP2BPQ9P2M1 347 aa4.25□□□□□ -1.73
XRN1-209ENST00000472625 MORF4L1Q9UBU8 362 aa4.25□□□□□ -1.73
XRN1-209ENST00000472625 DOCK2Q92608 1830 aa4.25□□□□□ -1.73
XRN1-209ENST00000472625 TRIOBPQ9H2D6 2365 aa4.24□□□□□ -1.73
XRN1-209ENST00000472625 DNAJC25-GNG10A0A024R161 153 aa4.24□□□□□ -1.73
XRN1-209ENST00000472625 DDTLA6NHG4 134 aaPredicted RBP4.24□□□□□ -1.73
XRN1-209ENST00000472625 CTGFP29279 349 aa4.24□□□□□ -1.73
XRN1-209ENST00000472625 ETV3P41162 512 aa4.24□□□□□ -1.73
XRN1-209ENST00000472625 YARSP54577 528 aaKnown RBP4.24□□□□□ -1.73
XRN1-209ENST00000472625 HMGCS2P54868 508 aa4.24□□□□□ -1.73
XRN1-209ENST00000472625 HERVK_113P62684 666 aa4.24□□□□□ -1.73
XRN1-209ENST00000472625 CAP1Q01518 475 aa4.24□□□□□ -1.73
XRN1-209ENST00000472625 SLFN5Q08AF3 891 aa4.24□□□□□ -1.73
XRN1-209ENST00000472625 SPP2Q13103 211 aa4.24□□□□□ -1.73
XRN1-209ENST00000472625 OS9Q13438 667 aaPredicted RBP4.24□□□□□ -1.73
XRN1-209ENST00000472625 ZYXQ15942 572 aaKnown RBP4.24□□□□□ -1.73
XRN1-209ENST00000472625 CCDC184Q52MB2 194 aa4.24□□□□□ -1.73
XRN1-209ENST00000472625 RALGPS1Q5JS13 557 aa4.24□□□□□ -1.73
XRN1-209ENST00000472625 TTC39AQ5SRH9 613 aa4.24□□□□□ -1.73
XRN1-209ENST00000472625 MAP3K21Q5TCX8 1036 aa4.24□□□□□ -1.73
XRN1-209ENST00000472625 MFSD14CQ5VZR4 134 aa4.24□□□□□ -1.73
XRN1-209ENST00000472625 NAA16Q6N069 864 aaPredicted RBP4.24□□□□□ -1.73
XRN1-209ENST00000472625 ZNF746Q6NUN9 644 aaPredicted RBP4.24□□□□□ -1.73
XRN1-209ENST00000472625 NLRC3Q7RTR2 1065 aa4.24□□□□□ -1.73
XRN1-209ENST00000472625 PPFIBP1Q86W92 1011 aa4.24□□□□□ -1.73
XRN1-209ENST00000472625 FOXP4Q8IVH2 680 aaPredicted RBP4.24□□□□□ -1.73
XRN1-209ENST00000472625 AMOTL1Q8IY63 956 aa4.24□□□□□ -1.73
XRN1-209ENST00000472625 C7orf61Q8IZ16 206 aa4.24□□□□□ -1.73
XRN1-209ENST00000472625 NSUN4Q96CB9 384 aaKnown RBP4.24□□□□□ -1.73
XRN1-209ENST00000472625 PAWRQ96IZ0 340 aaKnown RBP4.24□□□□□ -1.73
XRN1-209ENST00000472625 KIRREL1Q96J84 757 aa4.24□□□□□ -1.73
XRN1-209ENST00000472625 ZNF512BQ96KM6 892 aaPredicted RBP4.24□□□□□ -1.73
XRN1-209ENST00000472625 NEUROD6Q96NK8 337 aa4.24□□□□□ -1.73
XRN1-209ENST00000472625 FEZ1Q99689 392 aa4.24□□□□□ -1.73
XRN1-209ENST00000472625 LBHD1Q9BQE6 289 aaPredicted RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms