RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 GNL2Q13823 731 aaKnown RBP10.33□□□□□ -0.76
SMC4-213ENST00000472282 IKBKEQ14164 716 aa10.33□□□□□ -0.76
SMC4-213ENST00000472282 CEP55Q53EZ4 464 aa10.33□□□□□ -0.76
SMC4-213ENST00000472282 PLEKHG4Q58EX7 1191 aa10.33□□□□□ -0.76
SMC4-213ENST00000472282 LCE2CQ5TA81 110 aa10.33□□□□□ -0.76
SMC4-213ENST00000472282 LARP1BQ659C4 914 aaKnown RBP10.33□□□□□ -0.76
SMC4-213ENST00000472282 UIMC1Q96RL1 719 aa10.33□□□□□ -0.76
SMC4-213ENST00000472282 REV3LO60673 3130 aa10.32□□□□□ -0.76
SMC4-213ENST00000472282 IGLV3-22A0A075B6J6 115 aa10.32□□□□□ -0.76
SMC4-213ENST00000472282 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.32□□□□□ -0.76
SMC4-213ENST00000472282 VPS37CA5D8V6 355 aaPredicted RBP10.32□□□□□ -0.76
SMC4-213ENST00000472282 H3BQV1 296 aa10.32□□□□□ -0.76
SMC4-213ENST00000472282 TDP2O95551 362 aa10.32□□□□□ -0.76
SMC4-213ENST00000472282 CHRNA1P02708 482 aa10.32□□□□□ -0.76
SMC4-213ENST00000472282 CIITAP33076 1130 aa10.32□□□□□ -0.76
SMC4-213ENST00000472282 ITGB3BPQ13352 177 aaPredicted RBP10.32□□□□□ -0.76
SMC4-213ENST00000472282 MARCH8Q5T0T0 291 aa10.32□□□□□ -0.76
SMC4-213ENST00000472282 MCTP1Q6DN14 999 aa10.32□□□□□ -0.76
SMC4-213ENST00000472282 NEK8Q86SG6 692 aa10.32□□□□□ -0.76
SMC4-213ENST00000472282 PLA2G4DQ86XP0 818 aa10.32□□□□□ -0.76
SMC4-213ENST00000472282 GIMAP8Q8ND71 665 aaPredicted RBP10.32□□□□□ -0.76
SMC4-213ENST00000472282 GDPD5Q8WTR4 605 aa10.32□□□□□ -0.76
SMC4-213ENST00000472282 SEPT1Q8WYJ6 367 aa10.32□□□□□ -0.76
SMC4-213ENST00000472282 SYMPKQ92797 1274 aaKnown RBP10.32□□□□□ -0.76
SMC4-213ENST00000472282 HPS1Q92902 700 aa10.32□□□□□ -0.76
SMC4-213ENST00000472282 FOXP1Q9H334 677 aaPredicted RBP10.32□□□□□ -0.76
SMC4-213ENST00000472282 KCNH7Q9NS40 1196 aa10.32□□□□□ -0.76
SMC4-213ENST00000472282 THEGQ9P2T0 379 aa10.32□□□□□ -0.76
SMC4-213ENST00000472282 ZNF215Q9UL58 517 aaPredicted RBP10.32□□□□□ -0.76
SMC4-213ENST00000472282 MTUS1Q9ULD2 1270 aa10.32□□□□□ -0.76
SMC4-213ENST00000472282 ARID2Q68CP9 1835 aa10.32□□□□□ -0.76
SMC4-213ENST00000472282 EMSYQ7Z589 1322 aa10.32□□□□□ -0.76
SMC4-213ENST00000472282 TTC3P53804 2025 aa10.31□□□□□ -0.76
SMC4-213ENST00000472282 LINC01553A4QN01 128 aa10.31□□□□□ -0.76
SMC4-213ENST00000472282 MEIS1O00470 390 aa10.31□□□□□ -0.76
SMC4-213ENST00000472282 POU3F3P20264 500 aaPredicted RBP10.31□□□□□ -0.76
SMC4-213ENST00000472282 PDCP20941 246 aa10.31□□□□□ -0.76
SMC4-213ENST00000472282 USP11P51784 963 aa10.31□□□□□ -0.76
SMC4-213ENST00000472282 SETQ01105 290 aaPredicted RBP10.31□□□□□ -0.76
SMC4-213ENST00000472282 TFF2Q03403 129 aa10.31□□□□□ -0.76
SMC4-213ENST00000472282 MGAT3Q09327 533 aa10.31□□□□□ -0.76
SMC4-213ENST00000472282 PPFIA1Q13136 1202 aa10.31□□□□□ -0.76
SMC4-213ENST00000472282 BECN1Q14457 450 aa10.31□□□□□ -0.76
SMC4-213ENST00000472282 GRIK4Q16099 956 aa10.31□□□□□ -0.76
SMC4-213ENST00000472282 LETM2Q2VYF4 491 aa10.31□□□□□ -0.76
SMC4-213ENST00000472282 PRR16Q569H4 304 aa10.31□□□□□ -0.76
SMC4-213ENST00000472282 FAM26DQ5JW98 314 aa10.31□□□□□ -0.76
SMC4-213ENST00000472282 NIPA1Q7RTP0 329 aa10.31□□□□□ -0.76
SMC4-213ENST00000472282 NOSTRINQ8IVI9 506 aa10.31□□□□□ -0.76
SMC4-213ENST00000472282 MYOCDQ8IZQ8 938 aa10.31□□□□□ -0.76
SMC4-213ENST00000472282 EHBP1Q8NDI1 1231 aa10.31□□□□□ -0.76
SMC4-213ENST00000472282 TRAPPC12Q8WVT3 735 aa10.31□□□□□ -0.76
SMC4-213ENST00000472282 LENG9Q96B70 501 aa10.31□□□□□ -0.76
SMC4-213ENST00000472282 CDHR1Q96JP9 859 aa10.31□□□□□ -0.76
SMC4-213ENST00000472282 SUGCTQ9HAC7 445 aa10.31□□□□□ -0.76
SMC4-213ENST00000472282 AGO4Q9HCK5 861 aaKnown RBP10.31□□□□□ -0.76
SMC4-213ENST00000472282 JPH1Q9HDC5 661 aaPredicted RBP10.31□□□□□ -0.76
SMC4-213ENST00000472282 SLC9A2Q9UBY0 812 aa10.31□□□□□ -0.76
SMC4-213ENST00000472282 FNDC1Q4ZHG4 1894 aaPredicted RBP10.31□□□□□ -0.76
SMC4-213ENST00000472282 PLXNA4Q9HCM2 1894 aa10.31□□□□□ -0.76
SMC4-213ENST00000472282 NRCAMQ92823 1304 aa10.31□□□□□ -0.76
SMC4-213ENST00000472282 MBLAC1A4D2B0 266 aaPredicted RBP10.3□□□□□ -0.76
SMC4-213ENST00000472282 DDX39AO00148 427 aaKnown RBP10.3□□□□□ -0.76
SMC4-213ENST00000472282 MAFGO15525 162 aa10.3□□□□□ -0.76
SMC4-213ENST00000472282 SLC37A4O43826 429 aa10.3□□□□□ -0.76
SMC4-213ENST00000472282 CCNT1O60563 726 aaKnown RBP10.3□□□□□ -0.76
SMC4-213ENST00000472282 CCNE2O96020 404 aa10.3□□□□□ -0.76
SMC4-213ENST00000472282 INSRRP14616 1297 aa10.3□□□□□ -0.76
SMC4-213ENST00000472282 SYT1P21579 422 aa10.3□□□□□ -0.76
SMC4-213ENST00000472282 U2AF2P26368 475 aaKnown RBP eCLIP10.3□□□□□ -0.761e-7■■■■■ 37.8
SMC4-213ENST00000472282 SSTR3P32745 418 aaPredicted RBP10.3□□□□□ -0.76
SMC4-213ENST00000472282 ACTR2P61160 394 aa10.3□□□□□ -0.76
SMC4-213ENST00000472282 IGBP1P78318 339 aa10.3□□□□□ -0.76
SMC4-213ENST00000472282 HTRA4P83105 476 aaPredicted RBP10.3□□□□□ -0.76
SMC4-213ENST00000472282 INSM1Q01101 510 aaPredicted RBP10.3□□□□□ -0.76
SMC4-213ENST00000472282 MOXD1Q6UVY6 613 aa10.3□□□□□ -0.76
SMC4-213ENST00000472282 DNAJB3Q8WWF6 145 aa10.3□□□□□ -0.76
SMC4-213ENST00000472282 GLG1Q92896 1179 aa10.3□□□□□ -0.76
SMC4-213ENST00000472282 MBOAT7Q96N66 472 aa10.3□□□□□ -0.76
SMC4-213ENST00000472282 ASB2Q96Q27 587 aa10.3□□□□□ -0.76
SMC4-213ENST00000472282 RAD9AQ99638 391 aa10.3□□□□□ -0.76
SMC4-213ENST00000472282 C17orf80Q9BSJ5 609 aa10.3□□□□□ -0.76
SMC4-213ENST00000472282 ERAP1Q9NZ08 941 aa10.3□□□□□ -0.76
SMC4-213ENST00000472282 TUBE1Q9UJT0 475 aa10.3□□□□□ -0.76
SMC4-213ENST00000472282 NFASCO94856 1347 aa10.3□□□□□ -0.76
SMC4-213ENST00000472282 CUL9Q8IWT3 2517 aa10.3□□□□□ -0.76
SMC4-213ENST00000472282 CYP3A7-CYP3A51PA0A087WV96 503 aa10.29□□□□□ -0.76
SMC4-213ENST00000472282 MSH4O15457 936 aa10.29□□□□□ -0.76
SMC4-213ENST00000472282 DHX15O43143 795 aaKnown RBP10.29□□□□□ -0.76
SMC4-213ENST00000472282 EFCAB14O75071 495 aa10.29□□□□□ -0.76
SMC4-213ENST00000472282 CAND2O75155 1236 aa10.29□□□□□ -0.76
SMC4-213ENST00000472282 UPP2O95045 317 aa10.29□□□□□ -0.76
SMC4-213ENST00000472282 AMHP03971 560 aa10.29□□□□□ -0.76
SMC4-213ENST00000472282 CCNYL3P0C7X3 344 aa10.29□□□□□ -0.76
SMC4-213ENST00000472282 GHRP10912 638 aa10.29□□□□□ -0.76
SMC4-213ENST00000472282 GNAT1P11488 350 aa10.29□□□□□ -0.76
SMC4-213ENST00000472282 GCFC2P16383 781 aaKnown RBP10.29□□□□□ -0.76
SMC4-213ENST00000472282 ATP2B1P20020 1258 aa10.29□□□□□ -0.76
SMC4-213ENST00000472282 CYP3A7P24462 503 aa10.29□□□□□ -0.76
SMC4-213ENST00000472282 KCNQ1P51787 676 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms