RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 QARSP47897 775 aaKnown RBP13.3□□□□□ -0.28
CLRN1-205ENST00000472224 TRAPPC10P48553 1259 aa13.3□□□□□ -0.28
CLRN1-205ENST00000472224 MGAT3Q09327 533 aa13.3□□□□□ -0.28
CLRN1-205ENST00000472224 TBC1D8BQ0IIM8 1120 aa13.3□□□□□ -0.28
CLRN1-205ENST00000472224 CTTNQ14247 550 aaKnown RBP13.3□□□□□ -0.28
CLRN1-205ENST00000472224 TCTN1Q2MV58 587 aa13.3□□□□□ -0.28
CLRN1-205ENST00000472224 XKR3Q5GH77 459 aa13.3□□□□□ -0.28
CLRN1-205ENST00000472224 IER5Q5VY09 327 aa13.3□□□□□ -0.28
CLRN1-205ENST00000472224 LRRC71Q8N4P6 559 aa13.3□□□□□ -0.28
CLRN1-205ENST00000472224 PHOSPHO2Q8TCD6 241 aa13.3□□□□□ -0.28
CLRN1-205ENST00000472224 SEPT8Q92599 483 aa13.3□□□□□ -0.28
CLRN1-205ENST00000472224 OSBPL7Q9BZF2 842 aa13.3□□□□□ -0.28
CLRN1-205ENST00000472224 RGL1Q9NZL6 768 aa13.3□□□□□ -0.28
CLRN1-205ENST00000472224 AKT3Q9Y243 479 aa13.3□□□□□ -0.28
CLRN1-205ENST00000472224 MYH15Q9Y2K3 1946 aa13.29□□□□□ -0.28
CLRN1-205ENST00000472224 DKC1O60832 514 aaKnown RBP eCLIP13.29□□□□□ -0.28
CLRN1-205ENST00000472224 BAIAP3O94812 1187 aa13.29□□□□□ -0.28
CLRN1-205ENST00000472224 VTNP04004 478 aa13.29□□□□□ -0.28
CLRN1-205ENST00000472224 P4HBP07237 508 aaKnown RBP13.29□□□□□ -0.28
CLRN1-205ENST00000472224 KCNA5P22460 613 aa13.29□□□□□ -0.28
CLRN1-205ENST00000472224 TECP42680 631 aa13.29□□□□□ -0.28
CLRN1-205ENST00000472224 SPIRE1Q08AE8 756 aa13.29□□□□□ -0.28
CLRN1-205ENST00000472224 ORC2Q13416 577 aaPredicted RBP13.29□□□□□ -0.28
CLRN1-205ENST00000472224 EPHA7Q15375 998 aa13.29□□□□□ -0.28
CLRN1-205ENST00000472224 TMEM266Q2M3C6 531 aa13.29□□□□□ -0.28
CLRN1-205ENST00000472224 HFE2Q6ZVN8 426 aa13.29□□□□□ -0.28
CLRN1-205ENST00000472224 TMCO2Q7Z6W1 182 aaPredicted RBP13.29□□□□□ -0.28
CLRN1-205ENST00000472224 TPH2Q8IWU9 490 aa13.29□□□□□ -0.28
CLRN1-205ENST00000472224 DBF4BQ8NFT6 615 aa13.29□□□□□ -0.28
CLRN1-205ENST00000472224 CCDC43Q96MW1 224 aaKnown RBP13.29□□□□□ -0.28
CLRN1-205ENST00000472224 SCLT1Q96NL6 688 aa13.29□□□□□ -0.28
CLRN1-205ENST00000472224 MTMR9Q96QG7 549 aa13.29□□□□□ -0.28
CLRN1-205ENST00000472224 MAP7D2Q96T17 732 aa13.29□□□□□ -0.28
CLRN1-205ENST00000472224 EIF2AK1Q9BQI3 630 aaKnown RBP13.29□□□□□ -0.28
CLRN1-205ENST00000472224 IFIH1Q9BYX4 1025 aaKnown RBP13.29□□□□□ -0.28
CLRN1-205ENST00000472224 SUGCTQ9HAC7 445 aa13.29□□□□□ -0.28
CLRN1-205ENST00000472224 BMP2KQ9NSY1 1161 aaPredicted RBP13.29□□□□□ -0.28
CLRN1-205ENST00000472224 LMCD1Q9NZU5 365 aa13.29□□□□□ -0.28
CLRN1-205ENST00000472224 WRAP73Q9P2S5 460 aaPredicted RBP13.29□□□□□ -0.28
CLRN1-205ENST00000472224 PCDHB6Q9Y5E3 794 aa13.29□□□□□ -0.28
CLRN1-205ENST00000472224 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.28□□□□□ -0.28
CLRN1-205ENST00000472224 GRXCR2A6NFK2 248 aa13.28□□□□□ -0.28
CLRN1-205ENST00000472224 MAGEB2O15479 319 aa13.28□□□□□ -0.28
CLRN1-205ENST00000472224 DCXO43602 365 aa13.28□□□□□ -0.28
CLRN1-205ENST00000472224 RPLP2P05387 115 aaKnown RBP13.28□□□□□ -0.28
CLRN1-205ENST00000472224 PDCP20941 246 aa13.28□□□□□ -0.28
CLRN1-205ENST00000472224 TMOD1P28289 359 aa13.28□□□□□ -0.28
CLRN1-205ENST00000472224 TOB1P50616 345 aaPredicted RBP13.28□□□□□ -0.28
CLRN1-205ENST00000472224 WDR5P61964 334 aaKnown RBP13.28□□□□□ -0.28
CLRN1-205ENST00000472224 DEFB103AP81534 67 aa13.28□□□□□ -0.28
CLRN1-205ENST00000472224 IKBKEQ14164 716 aa13.28□□□□□ -0.28
CLRN1-205ENST00000472224 FAM26DQ5JW98 314 aa13.28□□□□□ -0.28
CLRN1-205ENST00000472224 PTCRAQ6ISU1 281 aaPredicted RBP13.28□□□□□ -0.28
CLRN1-205ENST00000472224 EFCAB12Q6NXP0 572 aa13.28□□□□□ -0.28
CLRN1-205ENST00000472224 FAM117BQ6P1L5 589 aa13.28□□□□□ -0.28
CLRN1-205ENST00000472224 RPAINQ86UA6 219 aa13.28□□□□□ -0.28
CLRN1-205ENST00000472224 FERMT3Q86UX7 667 aa13.28□□□□□ -0.28
CLRN1-205ENST00000472224 SNX21Q969T3 373 aa13.28□□□□□ -0.28
CLRN1-205ENST00000472224 ZNF668Q96K58 619 aaPredicted RBP13.28□□□□□ -0.28
CLRN1-205ENST00000472224 CEP170P1Q96L14 293 aa13.28□□□□□ -0.28
CLRN1-205ENST00000472224 MYO15AQ9UKN7 3530 aa13.27□□□□□ -0.28
CLRN1-205ENST00000472224 ABHD14A-ACY1A0A1B0GW23 586 aa13.27□□□□□ -0.29
CLRN1-205ENST00000472224 IBSPP21815 317 aaPredicted RBP13.27□□□□□ -0.29
CLRN1-205ENST00000472224 CD52P31358 61 aa13.27□□□□□ -0.29
CLRN1-205ENST00000472224 YWHABP31946 246 aaKnown RBP13.27□□□□□ -0.29
CLRN1-205ENST00000472224 NPEPPSP55786 919 aa13.27□□□□□ -0.29
CLRN1-205ENST00000472224 PTGDRQ13258 359 aa13.27□□□□□ -0.29
CLRN1-205ENST00000472224 LPIN1Q14693 890 aa13.27□□□□□ -0.29
CLRN1-205ENST00000472224 KIZQ2M2Z5 673 aa13.27□□□□□ -0.29
CLRN1-205ENST00000472224 PLEKHG4Q58EX7 1191 aa13.27□□□□□ -0.29
CLRN1-205ENST00000472224 RILPL1Q5EBL4 403 aa13.27□□□□□ -0.29
CLRN1-205ENST00000472224 FBXO47Q5MNV8 452 aa13.27□□□□□ -0.29
CLRN1-205ENST00000472224 TSHZ1Q6ZSZ6 1077 aa13.27□□□□□ -0.29
CLRN1-205ENST00000472224 ANO5Q75V66 913 aa13.27□□□□□ -0.29
CLRN1-205ENST00000472224 KIAA0319LQ8IZA0 1049 aa13.27□□□□□ -0.29
CLRN1-205ENST00000472224 MYOCDQ8IZQ8 938 aa13.27□□□□□ -0.29
CLRN1-205ENST00000472224 NEK9Q8TD19 979 aa13.27□□□□□ -0.29
CLRN1-205ENST00000472224 INTS4Q96HW7 963 aaKnown RBP13.27□□□□□ -0.29
CLRN1-205ENST00000472224 OSMRQ99650 979 aa13.27□□□□□ -0.29
CLRN1-205ENST00000472224 CELF4Q9BZC1 486 aaKnown RBP13.27□□□□□ -0.29
CLRN1-205ENST00000472224 ZSWIM4Q9H7M6 989 aa13.27□□□□□ -0.29
CLRN1-205ENST00000472224 ATG2AQ2TAZ0 1938 aa13.27□□□□□ -0.29
CLRN1-205ENST00000472224 CACNA1AO00555 2505 aa13.26□□□□□ -0.29
CLRN1-205ENST00000472224 EFCAB14O75071 495 aa13.26□□□□□ -0.29
CLRN1-205ENST00000472224 STBD1O95210 358 aa13.26□□□□□ -0.29
CLRN1-205ENST00000472224 AMHP03971 560 aa13.26□□□□□ -0.29
CLRN1-205ENST00000472224 POLGP54098 1239 aaPredicted RBP13.26□□□□□ -0.29
CLRN1-205ENST00000472224 PAK2Q13177 524 aa13.26□□□□□ -0.29
CLRN1-205ENST00000472224 TARBP2Q15633 366 aaKnown RBP13.26□□□□□ -0.29
CLRN1-205ENST00000472224 XKR9Q5GH70 373 aa13.26□□□□□ -0.29
CLRN1-205ENST00000472224 KMT2EQ8IZD2 1858 aa13.26□□□□□ -0.29
CLRN1-205ENST00000472224 NME8Q8N427 588 aa13.26□□□□□ -0.29
CLRN1-205ENST00000472224 SPRYD3Q8NCJ5 442 aa13.26□□□□□ -0.29
CLRN1-205ENST00000472224 PRSS33Q8NF86 280 aa13.26□□□□□ -0.29
CLRN1-205ENST00000472224 ERMNQ8TAM6 284 aa13.26□□□□□ -0.29
CLRN1-205ENST00000472224 ZBED2Q9BTP6 218 aa13.26□□□□□ -0.29
CLRN1-205ENST00000472224 NIFKQ9BYG3 293 aaKnown RBP13.26□□□□□ -0.29
CLRN1-205ENST00000472224 CYP26B1Q9NR63 512 aa13.26□□□□□ -0.29
CLRN1-205ENST00000472224 MTUS1Q9ULD2 1270 aa13.26□□□□□ -0.29
CLRN1-205ENST00000472224 DCHS1Q96JQ0 3298 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms