RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 STRA6Q9BX79 667 aa16.42■□□□□ 0.22
UBXN11-213ENST00000472155 DMAC2Q9NW81 257 aa16.42■□□□□ 0.22
UBXN11-213ENST00000472155 DDX3XO00571 662 aaKnown RBP eCLIP16.42■□□□□ 0.22
UBXN11-213ENST00000472155 BACH1O14867 736 aa16.42■□□□□ 0.22
UBXN11-213ENST00000472155 PALB2Q86YC2 1186 aa16.42■□□□□ 0.22
UBXN11-213ENST00000472155 FAM84AQ96KN4 292 aa16.42■□□□□ 0.22
UBXN11-213ENST00000472155 GPR88Q9GZN0 384 aa16.42■□□□□ 0.22
UBXN11-213ENST00000472155 METTL14Q9HCE5 456 aaKnown RBP16.42■□□□□ 0.22
UBXN11-213ENST00000472155 PPP1R9AQ9ULJ8 1098 aa16.42■□□□□ 0.22
UBXN11-213ENST00000472155 TESPA1A2RU30 521 aaPredicted RBP16.41■□□□□ 0.22
UBXN11-213ENST00000472155 ZNF280AP59817 542 aaPredicted RBP16.41■□□□□ 0.22
UBXN11-213ENST00000472155 ALKBH5Q6P6C2 394 aaKnown RBP16.41■□□□□ 0.22
UBXN11-213ENST00000472155 ARHGAP27Q6ZUM4 889 aa16.41■□□□□ 0.22
UBXN11-213ENST00000472155 SYCP3Q8IZU3 236 aa16.41■□□□□ 0.22
UBXN11-213ENST00000472155 LNX1Q8TBB1 728 aaPredicted RBP16.41■□□□□ 0.22
UBXN11-213ENST00000472155 PLEKHO2Q8TD55 490 aa16.41■□□□□ 0.22
UBXN11-213ENST00000472155 TRERF1Q96PN7 1200 aa16.41■□□□□ 0.22
UBXN11-213ENST00000472155 RMDN3Q96TC7 470 aa16.41■□□□□ 0.22
UBXN11-213ENST00000472155 CNOT7Q9UIV1 285 aaKnown RBP16.41■□□□□ 0.22
UBXN11-213ENST00000472155 FAN1Q9Y2M0 1017 aa16.41■□□□□ 0.22
UBXN11-213ENST00000472155 EVI5O60447 810 aa16.41■□□□□ 0.22
UBXN11-213ENST00000472155 GUCY2CP25092 1073 aa16.41■□□□□ 0.22
UBXN11-213ENST00000472155 SF3B2Q13435 895 aaKnown RBP16.41■□□□□ 0.22
UBXN11-213ENST00000472155 TRADDQ15628 312 aa16.41■□□□□ 0.22
UBXN11-213ENST00000472155 PCNX4Q63HM2 1172 aa16.41■□□□□ 0.22
UBXN11-213ENST00000472155 CCNI2Q6ZMN8 369 aaPredicted RBP16.41■□□□□ 0.22
UBXN11-213ENST00000472155 VPS18Q9P253 973 aa16.41■□□□□ 0.22
UBXN11-213ENST00000472155 DOCK5Q9H7D0 1870 aa16.41■□□□□ 0.22
UBXN11-213ENST00000472155 ZC3H4Q9UPT8 1303 aaKnown RBP16.41■□□□□ 0.22
UBXN11-213ENST00000472155 EXOC3O60645 756 aa16.4■□□□□ 0.22
UBXN11-213ENST00000472155 P4HBP07237 508 aaKnown RBP16.4■□□□□ 0.22
UBXN11-213ENST00000472155 SP4Q02446 784 aa16.4■□□□□ 0.22
UBXN11-213ENST00000472155 PRKG1Q13976 671 aa16.4■□□□□ 0.22
UBXN11-213ENST00000472155 BAATQ14032 418 aaPredicted RBP16.4■□□□□ 0.22
UBXN11-213ENST00000472155 ARHGAP44Q17R89 818 aa16.4■□□□□ 0.22
UBXN11-213ENST00000472155 CCDC181Q5TID7 509 aa16.4■□□□□ 0.22
UBXN11-213ENST00000472155 GLYCTKQ8IVS8 523 aa16.4■□□□□ 0.22
UBXN11-213ENST00000472155 RNF10Q8N5U6 811 aaKnown RBP16.4■□□□□ 0.22
UBXN11-213ENST00000472155 DNAJC12Q9UKB3 198 aa16.4■□□□□ 0.22
UBXN11-213ENST00000472155 ODF2LQ9ULJ1 636 aa16.4■□□□□ 0.22
UBXN11-213ENST00000472155 PCDHGC5Q9Y5F6 944 aa16.4■□□□□ 0.22
UBXN11-213ENST00000472155 ESYT3A0FGR9 886 aa16.4■□□□□ 0.22
UBXN11-213ENST00000472155 GOLGA8IPA6NC78 632 aa16.4■□□□□ 0.22
UBXN11-213ENST00000472155 GOLGA8JA6NMD2 632 aa16.4■□□□□ 0.22
UBXN11-213ENST00000472155 VWA5AO00534 786 aa16.4■□□□□ 0.22
UBXN11-213ENST00000472155 SLC16A4O15374 487 aa16.4■□□□□ 0.22
UBXN11-213ENST00000472155 TCP1P17987 556 aaKnown RBP16.4■□□□□ 0.22
UBXN11-213ENST00000472155 DRAP1Q14919 205 aaPredicted RBP16.4■□□□□ 0.22
UBXN11-213ENST00000472155 MEI1Q5TIA1 1274 aa16.4■□□□□ 0.22
UBXN11-213ENST00000472155 PHLDB3Q6NSJ2 640 aa16.4■□□□□ 0.22
UBXN11-213ENST00000472155 HS2ST1Q7LGA3 356 aa16.4■□□□□ 0.22
UBXN11-213ENST00000472155 MMGT1Q8N4V1 131 aa16.4■□□□□ 0.22
UBXN11-213ENST00000472155 U2AF1L4Q8WU68 220 aaKnown RBP16.4■□□□□ 0.22
UBXN11-213ENST00000472155 CCDC102AQ96A19 550 aa16.4■□□□□ 0.22
UBXN11-213ENST00000472155 PDCD2LQ9BRP1 358 aa16.4■□□□□ 0.22
UBXN11-213ENST00000472155 CTNND1O60716 968 aaKnown RBP16.39■□□□□ 0.21
UBXN11-213ENST00000472155 BCRP11274 1271 aa16.39■□□□□ 0.21
UBXN11-213ENST00000472155 PRLRP16471 622 aa16.39■□□□□ 0.21
UBXN11-213ENST00000472155 YWHABP31946 246 aaKnown RBP16.39■□□□□ 0.21
UBXN11-213ENST00000472155 HMGCS2P54868 508 aa16.39■□□□□ 0.21
UBXN11-213ENST00000472155 PPP3CAQ08209 521 aa16.39■□□□□ 0.21
UBXN11-213ENST00000472155 LPAR1Q92633 364 aa16.39■□□□□ 0.21
UBXN11-213ENST00000472155 PXMP2Q9NR77 195 aa16.39■□□□□ 0.21
UBXN11-213ENST00000472155 TAS2R14Q9NYV8 317 aa16.39■□□□□ 0.21
UBXN11-213ENST00000472155 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.39■□□□□ 0.21
UBXN11-213ENST00000472155 IGSF9BQ9UPX0 1349 aa16.39■□□□□ 0.21
UBXN11-213ENST00000472155 F8VZ95 297 aa16.39■□□□□ 0.21
UBXN11-213ENST00000472155 NOP2P46087 812 aaKnown RBP16.39■□□□□ 0.21
UBXN11-213ENST00000472155 QARSP47897 775 aaKnown RBP16.39■□□□□ 0.21
UBXN11-213ENST00000472155 TUBB4BP68371 445 aa16.39■□□□□ 0.21
UBXN11-213ENST00000472155 RNF207Q6ZRF8 634 aa16.39■□□□□ 0.21
UBXN11-213ENST00000472155 KAT5Q92993 513 aa16.39■□□□□ 0.21
UBXN11-213ENST00000472155 SELENOOQ9BVL4 669 aa16.39■□□□□ 0.21
UBXN11-213ENST00000472155 INTS2Q9H0H0 1204 aaKnown RBP16.39■□□□□ 0.21
UBXN11-213ENST00000472155 ADAM21Q9UKJ8 722 aa16.39■□□□□ 0.21
UBXN11-213ENST00000472155 NENFQ9UMX5 172 aa16.39■□□□□ 0.21
UBXN11-213ENST00000472155 ZNF541Q9H0D2 1346 aa16.39■□□□□ 0.21
UBXN11-213ENST00000472155 COL11A1P12107 1806 aaPredicted RBP16.39■□□□□ 0.21
UBXN11-213ENST00000472155 TARSL2A2RTX5 802 aaKnown RBP16.38■□□□□ 0.21
UBXN11-213ENST00000472155 PEX3P56589 373 aa16.38■□□□□ 0.21
UBXN11-213ENST00000472155 C1orf220Q5T0J3 134 aa16.38■□□□□ 0.21
UBXN11-213ENST00000472155 ZNF572Q7Z3I7 529 aaPredicted RBP16.38■□□□□ 0.21
UBXN11-213ENST00000472155 RPGRIP1Q96KN7 1286 aa16.38■□□□□ 0.21
UBXN11-213ENST00000472155 WRNIP1Q96S55 665 aa16.38■□□□□ 0.21
UBXN11-213ENST00000472155 VPS33BQ9H267 617 aa16.38■□□□□ 0.21
UBXN11-213ENST00000472155 OSGEPQ9NPF4 335 aa16.38■□□□□ 0.21
UBXN11-213ENST00000472155 ACP6Q9NPH0 428 aa16.38■□□□□ 0.21
UBXN11-213ENST00000472155 SEL1LQ9UBV2 794 aa16.38■□□□□ 0.21
UBXN11-213ENST00000472155 HPCAL4Q9UM19 191 aa16.38■□□□□ 0.21
UBXN11-213ENST00000472155 FRMD4BQ9Y2L6 1034 aa16.38■□□□□ 0.21
UBXN11-213ENST00000472155 GLI1P08151 1106 aa16.38■□□□□ 0.21
UBXN11-213ENST00000472155 CYP2C19P33261 490 aa16.38■□□□□ 0.21
UBXN11-213ENST00000472155 PRKCIP41743 596 aa16.38■□□□□ 0.21
UBXN11-213ENST00000472155 GCLMP48507 274 aa16.38■□□□□ 0.21
UBXN11-213ENST00000472155 FAM193AP78312 1265 aa16.38■□□□□ 0.21
UBXN11-213ENST00000472155 BFSP1Q12934 665 aa16.38■□□□□ 0.21
UBXN11-213ENST00000472155 TNIP1Q15025 636 aa16.38■□□□□ 0.21
UBXN11-213ENST00000472155 MCF2L2Q86YR7 1114 aa16.38■□□□□ 0.21
UBXN11-213ENST00000472155 LMO3Q8TAP4 145 aa16.38■□□□□ 0.21
UBXN11-213ENST00000472155 RNF146Q9NTX7 359 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms