RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 KRTAP1-1Q07627 177 aa7.04□□□□□ -1.28
CD46-213ENST00000471987 ABHD18Q0P651 414 aa7.04□□□□□ -1.28
CD46-213ENST00000471987 SQSTM1Q13501 440 aa7.04□□□□□ -1.28
CD46-213ENST00000471987 LSM12Q3MHD2 195 aaKnown RBP7.04□□□□□ -1.28
CD46-213ENST00000471987 TTC38Q5R3I4 469 aa7.04□□□□□ -1.28
CD46-213ENST00000471987 SLFN12LQ6IEE8 588 aa7.04□□□□□ -1.28
CD46-213ENST00000471987 NME9Q86XW9 330 aa7.04□□□□□ -1.28
CD46-213ENST00000471987 OR5AN1Q8NGI8 311 aa7.04□□□□□ -1.28
CD46-213ENST00000471987 IL17DQ8TAD2 202 aa7.04□□□□□ -1.28
CD46-213ENST00000471987 GCDHQ92947 438 aaPredicted RBP7.04□□□□□ -1.28
CD46-213ENST00000471987 PLEKHG4BQ96PX9 1271 aa7.04□□□□□ -1.28
CD46-213ENST00000471987 SLC6A15Q9H2J7 730 aa7.04□□□□□ -1.28
CD46-213ENST00000471987 KCMF1Q9P0J7 381 aa7.04□□□□□ -1.28
CD46-213ENST00000471987 GIT1Q9Y2X7 761 aa7.04□□□□□ -1.28
CD46-213ENST00000471987 A0A1W2PRX2 142 aa7.03□□□□□ -1.28
CD46-213ENST00000471987 TRAF5O00463 557 aa7.03□□□□□ -1.28
CD46-213ENST00000471987 ADCY7P51828 1080 aa7.03□□□□□ -1.28
CD46-213ENST00000471987 ATP2C1P98194 919 aaPredicted RBP7.03□□□□□ -1.28
CD46-213ENST00000471987 ZNF460Q14592 562 aa7.03□□□□□ -1.28
CD46-213ENST00000471987 PIK3R6Q5UE93 754 aa7.03□□□□□ -1.28
CD46-213ENST00000471987 UBE2R2Q712K3 238 aaPredicted RBP7.03□□□□□ -1.28
CD46-213ENST00000471987 THEMISQ8N1K5 641 aaPredicted RBP7.03□□□□□ -1.28
CD46-213ENST00000471987 KIAA1958Q8N8K9 716 aa7.03□□□□□ -1.28
CD46-213ENST00000471987 CAPN14A8MX76 684 aa7.02□□□□□ -1.29
CD46-213ENST00000471987 C1SP09871 688 aa7.02□□□□□ -1.29
CD46-213ENST00000471987 MCM7P33993 719 aa7.02□□□□□ -1.29
CD46-213ENST00000471987 EPHA7Q15375 998 aa7.02□□□□□ -1.29
CD46-213ENST00000471987 C16orf92Q96LL3 132 aa7.02□□□□□ -1.29
CD46-213ENST00000471987 TUBGCP5Q96RT8 1024 aa7.02□□□□□ -1.29
CD46-213ENST00000471987 B4GALT6Q9UBX8 382 aa7.02□□□□□ -1.29
CD46-213ENST00000471987 MAGEL2Q9UJ55 1249 aa7.02□□□□□ -1.29
CD46-213ENST00000471987 ING1Q9UK53 422 aaPredicted RBP7.02□□□□□ -1.29
CD46-213ENST00000471987 NARSO43776 548 aaKnown RBP7.01□□□□□ -1.29
CD46-213ENST00000471987 JMJD7P0C870 316 aa7.01□□□□□ -1.29
CD46-213ENST00000471987 ANTXR2P58335 489 aa7.01□□□□□ -1.29
CD46-213ENST00000471987 DGCR2P98153 550 aa7.01□□□□□ -1.29
CD46-213ENST00000471987 SAFB2Q14151 953 aaKnown RBP eCLIP7.01□□□□□ -1.29
CD46-213ENST00000471987 FHL2Q14192 279 aa7.01□□□□□ -1.29
CD46-213ENST00000471987 PRAMEF9Q5VWM5 478 aa7.01□□□□□ -1.29
CD46-213ENST00000471987 ANKRD35Q8N283 1001 aa7.01□□□□□ -1.29
CD46-213ENST00000471987 SH3TC2Q8TF17 1288 aa7.01□□□□□ -1.29
CD46-213ENST00000471987 CACTINQ8WUQ7 758 aaKnown RBP7.01□□□□□ -1.29
CD46-213ENST00000471987 ZSWIM4Q9H7M6 989 aa7.01□□□□□ -1.29
CD46-213ENST00000471987 ZNF703Q9H7S9 590 aaPredicted RBP7.01□□□□□ -1.29
CD46-213ENST00000471987 RBM8AQ9Y5S9 174 aaKnown RBP7.01□□□□□ -1.29
CD46-213ENST00000471987 KRTAP23-1A1A580 65 aa7□□□□□ -1.29
CD46-213ENST00000471987 CBX4O00257 560 aa7□□□□□ -1.29
CD46-213ENST00000471987 PPP1R12AO14974 1030 aaPredicted RBP7□□□□□ -1.29
CD46-213ENST00000471987 RFPL3O75679 317 aa7□□□□□ -1.29
CD46-213ENST00000471987 STAT3P40763 770 aa7□□□□□ -1.29
CD46-213ENST00000471987 BCAR1P56945 870 aa7□□□□□ -1.29
CD46-213ENST00000471987 BPIFB4P59827 614 aa7□□□□□ -1.29
CD46-213ENST00000471987 ADCY1Q08828 1119 aa7□□□□□ -1.29
CD46-213ENST00000471987 TCIRG1Q13488 830 aa7□□□□□ -1.29
CD46-213ENST00000471987 IGFL4Q6B9Z1 124 aa7□□□□□ -1.29
CD46-213ENST00000471987 BMP8AQ7Z5Y6 402 aa7□□□□□ -1.29
CD46-213ENST00000471987 RPGRQ92834 1020 aaKnown RBP7□□□□□ -1.29
CD46-213ENST00000471987 NKD2Q969F2 451 aaPredicted RBP7□□□□□ -1.29
CD46-213ENST00000471987 DYDC2Q96IM9 177 aa7□□□□□ -1.29
CD46-213ENST00000471987 WDR92Q96MX6 357 aa7□□□□□ -1.29
CD46-213ENST00000471987 SLITRK6Q9H5Y7 841 aa7□□□□□ -1.29
CD46-213ENST00000471987 TMEM260Q9NX78 707 aa7□□□□□ -1.29
CD46-213ENST00000471987 SH3BP1Q9Y3L3 701 aa7□□□□□ -1.29
CD46-213ENST00000471987 C2orf78A6NCI8 922 aa6.99□□□□□ -1.29
CD46-213ENST00000471987 GOLGA8BA8MQT2 603 aa6.99□□□□□ -1.29
CD46-213ENST00000471987 MAFGO15525 162 aa6.99□□□□□ -1.29
CD46-213ENST00000471987 SDSP20132 328 aa6.99□□□□□ -1.29
CD46-213ENST00000471987 PTX3P26022 381 aaPredicted RBP6.99□□□□□ -1.29
CD46-213ENST00000471987 TGFB2P61812 414 aa6.99□□□□□ -1.29
CD46-213ENST00000471987 CRHR2Q13324 411 aa6.99□□□□□ -1.29
CD46-213ENST00000471987 TUBA3CQ13748 450 aa6.99□□□□□ -1.29
CD46-213ENST00000471987 CFAP100Q494V2 611 aa6.99□□□□□ -1.29
CD46-213ENST00000471987 GAGE13Q4V321 117 aa6.99□□□□□ -1.29
CD46-213ENST00000471987 SPTY2D1Q68D10 685 aaPredicted RBP6.99□□□□□ -1.29
CD46-213ENST00000471987 CDCA2Q69YH5 1023 aaPredicted RBP6.99□□□□□ -1.29
CD46-213ENST00000471987 TUBA3EQ6PEY2 450 aa6.99□□□□□ -1.29
CD46-213ENST00000471987 SYNPOQ8N3V7 929 aa6.99□□□□□ -1.29
CD46-213ENST00000471987 ANKRD53Q8N9V6 530 aa6.99□□□□□ -1.29
CD46-213ENST00000471987 RPL10LQ96L21 214 aaKnown RBP6.99□□□□□ -1.29
CD46-213ENST00000471987 POLR3BQ9NW08 1133 aaPredicted RBP6.99□□□□□ -1.29
CD46-213ENST00000471987 MAGEC2Q9UBF1 373 aaPredicted RBP6.99□□□□□ -1.29
CD46-213ENST00000471987 ASMTLO95671 621 aa6.98□□□□□ -1.29
CD46-213ENST00000471987 SLC9A1P19634 815 aa6.98□□□□□ -1.29
CD46-213ENST00000471987 PABPC4Q13310 644 aaKnown RBP eCLIP6.98□□□□□ -1.29
CD46-213ENST00000471987 ACAP1Q15027 740 aa6.98□□□□□ -1.29
CD46-213ENST00000471987 TIGD7Q6NT04 549 aaPredicted RBP6.98□□□□□ -1.29
CD46-213ENST00000471987 GAREM2Q75VX8 874 aa6.98□□□□□ -1.29
CD46-213ENST00000471987 TMPRSS6Q8IU80 811 aa6.98□□□□□ -1.29
CD46-213ENST00000471987 GPHA2Q96T91 129 aa6.98□□□□□ -1.29
CD46-213ENST00000471987 MENTQ9BUN1 341 aa6.98□□□□□ -1.29
CD46-213ENST00000471987 KANSL2Q9H9L4 492 aa6.98□□□□□ -1.29
CD46-213ENST00000471987 INTS7Q9NVH2 962 aaKnown RBP6.98□□□□□ -1.29
CD46-213ENST00000471987 PARPBPQ9NWS1 579 aa6.98□□□□□ -1.29
CD46-213ENST00000471987 SYNPO2Q9UMS6 1093 aa6.98□□□□□ -1.29
CD46-213ENST00000471987 SPO11Q9Y5K1 396 aa6.98□□□□□ -1.29
CD46-213ENST00000471987 DAPK3O43293 454 aa6.97□□□□□ -1.29
CD46-213ENST00000471987 RRP1BQ14684 758 aaKnown RBP6.97□□□□□ -1.29
CD46-213ENST00000471987 MYBPC3Q14896 1274 aa6.97□□□□□ -1.29
CD46-213ENST00000471987 FAM111BQ6SJ93 734 aa6.97□□□□□ -1.29
CD46-213ENST00000471987 CLEC14AQ86T13 490 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms