RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 PAN2Q504Q3 1202 aaKnown RBP12.94□□□□□ -0.34
COL4A3-205ENST00000471862 NAALADL2Q58DX5 795 aa12.94□□□□□ -0.34
COL4A3-205ENST00000471862 TCEAL5Q5H9L2 206 aa12.94□□□□□ -0.34
COL4A3-205ENST00000471862 DIS3L2Q8IYB7 885 aaKnown RBP12.94□□□□□ -0.34
COL4A3-205ENST00000471862 IL27Q8NEV9 243 aa12.94□□□□□ -0.34
COL4A3-205ENST00000471862 ZNF668Q96K58 619 aaPredicted RBP12.94□□□□□ -0.34
COL4A3-205ENST00000471862 NECAB3Q96P71 396 aaPredicted RBP12.94□□□□□ -0.34
COL4A3-205ENST00000471862 SH2D3AQ9BRG2 576 aa12.94□□□□□ -0.34
COL4A3-205ENST00000471862 NSUN3Q9H649 340 aaKnown RBP12.94□□□□□ -0.34
COL4A3-205ENST00000471862 BRMS1Q9HCU9 246 aa12.94□□□□□ -0.34
COL4A3-205ENST00000471862 RNF19AQ9NV58 838 aa12.94□□□□□ -0.34
COL4A3-205ENST00000471862 TMEM161AQ9NX61 479 aa12.94□□□□□ -0.34
COL4A3-205ENST00000471862 LRFN2Q9ULH4 789 aa12.94□□□□□ -0.34
COL4A3-205ENST00000471862 PCDHB7Q9Y5E2 793 aa12.94□□□□□ -0.34
COL4A3-205ENST00000471862 DDX11L8A8MPP1 907 aa12.93□□□□□ -0.34
COL4A3-205ENST00000471862 BTBD18B2RXH4 712 aa12.93□□□□□ -0.34
COL4A3-205ENST00000471862 MAFO75444 373 aaPredicted RBP12.93□□□□□ -0.34
COL4A3-205ENST00000471862 P4HBP07237 508 aaKnown RBP12.93□□□□□ -0.34
COL4A3-205ENST00000471862 LEXMQ3ZCV2 418 aa12.93□□□□□ -0.34
COL4A3-205ENST00000471862 FAM102BQ5T8I3 360 aa12.93□□□□□ -0.34
COL4A3-205ENST00000471862 PLA2G4FQ68DD2 849 aa12.93□□□□□ -0.34
COL4A3-205ENST00000471862 C4orf19Q8IY42 314 aa12.93□□□□□ -0.34
COL4A3-205ENST00000471862 SPPL3Q8TCT6 385 aa12.93□□□□□ -0.34
COL4A3-205ENST00000471862 RNF216Q9NWF9 866 aaPredicted RBP12.93□□□□□ -0.34
COL4A3-205ENST00000471862 PLAGL2Q9UPG8 496 aa12.93□□□□□ -0.34
COL4A3-205ENST00000471862 LIMCH1Q9UPQ0 1083 aa12.93□□□□□ -0.34
COL4A3-205ENST00000471862 A0A087WZ62 844 aa12.92□□□□□ -0.34
COL4A3-205ENST00000471862 BDP1A6H8Y1 2624 aa12.92□□□□□ -0.34
COL4A3-205ENST00000471862 DKC1O60832 514 aaKnown RBP eCLIP12.92□□□□□ -0.34
COL4A3-205ENST00000471862 ITGB1P05556 798 aa12.92□□□□□ -0.34
COL4A3-205ENST00000471862 FGFR1P11362 822 aa12.92□□□□□ -0.34
COL4A3-205ENST00000471862 FGFR4P22455 802 aa12.92□□□□□ -0.34
COL4A3-205ENST00000471862 DNAJB1P25685 340 aa12.92□□□□□ -0.34
COL4A3-205ENST00000471862 NPEPPSP55786 919 aa12.92□□□□□ -0.34
COL4A3-205ENST00000471862 CDC42EP1Q00587 391 aa12.92□□□□□ -0.34
COL4A3-205ENST00000471862 ZNF410Q86VK4 478 aa12.92□□□□□ -0.34
COL4A3-205ENST00000471862 SLFN12Q8IYM2 578 aa12.92□□□□□ -0.34
COL4A3-205ENST00000471862 ZNF579Q8NAF0 562 aaKnown RBP12.92□□□□□ -0.34
COL4A3-205ENST00000471862 KLHL23Q8NBE8 558 aa12.92□□□□□ -0.34
COL4A3-205ENST00000471862 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.92□□□□□ -0.34
COL4A3-205ENST00000471862 NEK9Q8TD19 979 aa12.92□□□□□ -0.34
COL4A3-205ENST00000471862 NLRP7Q8WX94 980 aa12.92□□□□□ -0.34
COL4A3-205ENST00000471862 PABPC5Q96DU9 382 aaKnown RBP12.92□□□□□ -0.34
COL4A3-205ENST00000471862 FDXACB1Q9BRP7 624 aaPredicted RBP12.92□□□□□ -0.34
COL4A3-205ENST00000471862 LXNQ9BS40 222 aa12.92□□□□□ -0.34
COL4A3-205ENST00000471862 DHX33Q9H6R0 707 aaKnown RBP12.92□□□□□ -0.34
COL4A3-205ENST00000471862 CWH43Q9H720 699 aa12.92□□□□□ -0.34
COL4A3-205ENST00000471862 ATP6V0A4Q9HBG4 840 aa12.92□□□□□ -0.34
COL4A3-205ENST00000471862 ALG13Q9NP73 1137 aaKnown RBP12.92□□□□□ -0.34
COL4A3-205ENST00000471862 CYP26B1Q9NR63 512 aa12.92□□□□□ -0.34
COL4A3-205ENST00000471862 PPME1Q9Y570 386 aa12.92□□□□□ -0.34
COL4A3-205ENST00000471862 TBKBP1A7MCY6 615 aa12.91□□□□□ -0.34
COL4A3-205ENST00000471862 BAG4O95429 457 aaKnown RBP12.91□□□□□ -0.34
COL4A3-205ENST00000471862 ATF7P17544 494 aaPredicted RBP12.91□□□□□ -0.34
COL4A3-205ENST00000471862 KCNA5P22460 613 aa12.91□□□□□ -0.34
COL4A3-205ENST00000471862 FOSBP53539 338 aa12.91□□□□□ -0.34
COL4A3-205ENST00000471862 CTC1Q2NKJ3 1217 aa12.91□□□□□ -0.34
COL4A3-205ENST00000471862 NCAPH2Q6IBW4 605 aa12.91□□□□□ -0.34
COL4A3-205ENST00000471862 ZNF598Q86UK7 904 aaKnown RBP12.91□□□□□ -0.34
COL4A3-205ENST00000471862 ECHDC2Q86YB7 292 aa12.91□□□□□ -0.34
COL4A3-205ENST00000471862 CCDC83Q8IWF9 413 aa12.91□□□□□ -0.34
COL4A3-205ENST00000471862 DYDC2Q96IM9 177 aa12.91□□□□□ -0.34
COL4A3-205ENST00000471862 MTMR9Q96QG7 549 aa12.91□□□□□ -0.34
COL4A3-205ENST00000471862 JPH2Q9BR39 696 aaPredicted RBP12.91□□□□□ -0.34
COL4A3-205ENST00000471862 LLPHQ9BRT6 129 aaKnown RBP12.91□□□□□ -0.34
COL4A3-205ENST00000471862 GCOM2Q9BZD3 368 aaPredicted RBP12.91□□□□□ -0.34
COL4A3-205ENST00000471862 RGL1Q9NZL6 768 aa12.91□□□□□ -0.34
COL4A3-205ENST00000471862 SUCLA2Q9P2R7 463 aaPredicted RBP12.91□□□□□ -0.34
COL4A3-205ENST00000471862 HCSTQ9UBK5 93 aa12.91□□□□□ -0.34
COL4A3-205ENST00000471862 A0A0U1RQF3 1178 aa12.9□□□□□ -0.34
COL4A3-205ENST00000471862 CSDE1O75534 798 aaKnown RBP12.9□□□□□ -0.34
COL4A3-205ENST00000471862 SLITRK3O94933 977 aa12.9□□□□□ -0.34
COL4A3-205ENST00000471862 LYPLA2O95372 231 aa12.9□□□□□ -0.34
COL4A3-205ENST00000471862 ZSCAN20P17040 1043 aaPredicted RBP12.9□□□□□ -0.34
COL4A3-205ENST00000471862 IBSPP21815 317 aaPredicted RBP12.9□□□□□ -0.34
COL4A3-205ENST00000471862 IRS1P35568 1242 aa12.9□□□□□ -0.34
COL4A3-205ENST00000471862 LTBRP36941 435 aa12.9□□□□□ -0.34
COL4A3-205ENST00000471862 RBM25P49756 843 aaKnown RBP12.9□□□□□ -0.34
COL4A3-205ENST00000471862 DNM2P50570 870 aa12.9□□□□□ -0.34
COL4A3-205ENST00000471862 HYAL1Q12794 435 aa12.9□□□□□ -0.34
COL4A3-205ENST00000471862 TRIM29Q14134 588 aa12.9□□□□□ -0.34
COL4A3-205ENST00000471862 CALCRLQ16602 461 aa12.9□□□□□ -0.34
COL4A3-205ENST00000471862 RHPN2Q8IUC4 686 aa12.9□□□□□ -0.34
COL4A3-205ENST00000471862 POF1BQ8WVV4 589 aa12.9□□□□□ -0.34
COL4A3-205ENST00000471862 CEP170P1Q96L14 293 aa12.9□□□□□ -0.34
COL4A3-205ENST00000471862 ZSCAN31Q96LW9 406 aaPredicted RBP12.9□□□□□ -0.34
COL4A3-205ENST00000471862 SCLT1Q96NL6 688 aa12.9□□□□□ -0.34
COL4A3-205ENST00000471862 CASD1Q96PB1 797 aa12.9□□□□□ -0.34
COL4A3-205ENST00000471862 EIF2AK1Q9BQI3 630 aaKnown RBP12.9□□□□□ -0.34
COL4A3-205ENST00000471862 TRAIPQ9BWF2 469 aa12.9□□□□□ -0.34
COL4A3-205ENST00000471862 TMEM117Q9H0C3 514 aa12.9□□□□□ -0.34
COL4A3-205ENST00000471862 TYW1Q9NV66 732 aaKnown RBP12.9□□□□□ -0.34
COL4A3-205ENST00000471862 ZBTB39O15060 712 aa12.89□□□□□ -0.35
COL4A3-205ENST00000471862 HOXA2O43364 376 aa12.89□□□□□ -0.35
COL4A3-205ENST00000471862 NCK2O43639 380 aa12.89□□□□□ -0.35
COL4A3-205ENST00000471862 MARCH6O60337 910 aa12.89□□□□□ -0.35
COL4A3-205ENST00000471862 NEMFO60524 1076 aa12.89□□□□□ -0.35
COL4A3-205ENST00000471862 YWHABP31946 246 aaKnown RBP12.89□□□□□ -0.35
COL4A3-205ENST00000471862 RFC5P40937 340 aa12.89□□□□□ -0.35
COL4A3-205ENST00000471862 GUCY1B3Q02153 619 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms