RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 MAP4P27816 1152 aaKnown RBP9.2□□□□□ -0.94
CD47-204ENST00000471694 SNX1Q13596 522 aa9.2□□□□□ -0.94
CD47-204ENST00000471694 SYT10Q6XYQ8 523 aa9.2□□□□□ -0.94
CD47-204ENST00000471694 SELENONQ9NZV5 590 aa9.2□□□□□ -0.94
CD47-204ENST00000471694 PRG3Q9Y2Y8 225 aaPredicted RBP9.2□□□□□ -0.94
CD47-204ENST00000471694 DNMT1P26358 1616 aaKnown RBP9.2□□□□□ -0.94
CD47-204ENST00000471694 BTBD18B2RXH4 712 aa9.2□□□□□ -0.94
CD47-204ENST00000471694 ZBED1O96006 694 aa9.2□□□□□ -0.94
CD47-204ENST00000471694 E2F5Q15329 346 aa9.2□□□□□ -0.94
CD47-204ENST00000471694 LDHDQ86WU2 507 aa9.2□□□□□ -0.94
CD47-204ENST00000471694 KSR1Q8IVT5 923 aa9.2□□□□□ -0.94
CD47-204ENST00000471694 TMEM199Q8N511 208 aa9.2□□□□□ -0.94
CD47-204ENST00000471694 TMEM39BQ9GZU3 492 aa9.2□□□□□ -0.94
CD47-204ENST00000471694 SLC38A7Q9NVC3 462 aa9.2□□□□□ -0.94
CD47-204ENST00000471694 GCNT4Q9P109 453 aa9.2□□□□□ -0.94
CD47-204ENST00000471694 STAP1Q9ULZ2 295 aa9.2□□□□□ -0.94
CD47-204ENST00000471694 STXBP3O00186 592 aa9.2□□□□□ -0.94
CD47-204ENST00000471694 COBLO75128 1261 aa9.2□□□□□ -0.94
CD47-204ENST00000471694 ZC3H11AO75152 810 aaKnown RBP eCLIP9.2□□□□□ -0.94
CD47-204ENST00000471694 GCLCP48506 637 aaPredicted RBP9.2□□□□□ -0.94
CD47-204ENST00000471694 LMNB2Q03252 620 aa9.2□□□□□ -0.94
CD47-204ENST00000471694 LBRQ14739 615 aaKnown RBP9.2□□□□□ -0.94
CD47-204ENST00000471694 VCX3BQ9H321 246 aa9.2□□□□□ -0.94
CD47-204ENST00000471694 GPR182O15218 404 aa9.2□□□□□ -0.94
CD47-204ENST00000471694 IL31Q6EBC2 164 aa9.2□□□□□ -0.94
CD47-204ENST00000471694 ANTXR1Q9H6X2 564 aa9.2□□□□□ -0.94
CD47-204ENST00000471694 SPATA31A5Q5VU36 1347 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 SPATA31A7Q8IWB4 1347 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 ADGBQ8N7X0 1667 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 MAPK9P45984 424 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 PADI6Q6TGC4 694 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 HS6ST3Q8IZP7 471 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 ZKSCAN4Q969J2 545 aaPredicted RBP9.19□□□□□ -0.94
CD47-204ENST00000471694 TRIM54Q9BYV2 358 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 SUFUQ9UMX1 484 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 SYNGAP1Q96PV0 1343 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 DISP1Q96F81 1524 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 KDM1AO60341 852 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 KCNA1Q09470 495 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 CROCCP2Q86T23 111 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 LPAR1Q92633 364 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 ULK4Q96C45 1275 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 FOPNLQ96NB1 174 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 KIAA1586Q9HCI6 787 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 BCAP29Q9UHQ4 241 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 PRKCBP05771 671 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 PPP2R5EQ16537 467 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 ANKRD20A3Q5VUR7 823 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 TDRD10Q5VZ19 366 aaKnown RBP9.19□□□□□ -0.94
CD47-204ENST00000471694 BARGINQ6ZT62 677 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 TMTC1Q8IUR5 882 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 BHMTQ93088 406 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 TNIP3Q96KP6 325 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 PNMA5Q96PV4 448 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 MAGEB5Q9BZ81 275 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 MYL4P12829 197 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 BBOF1Q8ND07 529 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 CEP95Q96GE4 821 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 INTS4Q96HW7 963 aaKnown RBP9.19□□□□□ -0.94
CD47-204ENST00000471694 USP44Q9H0E7 712 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 TTC4O95801 387 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 ATP1A1P05023 1023 aaKnown RBP9.19□□□□□ -0.94
CD47-204ENST00000471694 TROVE2P10155 538 aaKnown RBP eCLIP9.19□□□□□ -0.94
CD47-204ENST00000471694 CKBP12277 381 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 HARS2P49590 506 aaKnown RBP9.19□□□□□ -0.94
CD47-204ENST00000471694 TUBB4BP68371 445 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 CDK17Q00537 523 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 BAATQ14032 418 aaPredicted RBP9.19□□□□□ -0.94
CD47-204ENST00000471694 TMEM132DQ14C87 1099 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 CUEDC2Q9H467 287 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 RABEP2Q9H5N1 569 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 RAD18Q9NS91 495 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 TLR7Q9NYK1 1049 aaKnown RBP9.19□□□□□ -0.94
CD47-204ENST00000471694 BRPF3Q9ULD4 1205 aa9.19□□□□□ -0.94
CD47-204ENST00000471694 UBA6A0AVT1 1052 aaPredicted RBP9.18□□□□□ -0.94
CD47-204ENST00000471694 RRN3P2A6NIE6 340 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 CYP27B1O15528 508 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 QARSP47897 775 aaKnown RBP9.18□□□□□ -0.94
CD47-204ENST00000471694 PSMC5P62195 406 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 AP1B1Q10567 949 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 ZBTB41Q5SVQ8 909 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 FOXR1Q6PIV2 292 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 COL23A1Q86Y22 540 aaPredicted RBP9.18□□□□□ -0.94
CD47-204ENST00000471694 AHCYL2Q96HN2 611 aaKnown RBP9.18□□□□□ -0.94
CD47-204ENST00000471694 CNOT6LQ96LI5 555 aaKnown RBP9.18□□□□□ -0.94
CD47-204ENST00000471694 NR1H4Q96RI1 486 aaPredicted RBP9.18□□□□□ -0.94
CD47-204ENST00000471694 RNF26Q9BY78 433 aaPredicted RBP9.18□□□□□ -0.94
CD47-204ENST00000471694 BHMT2Q9H2M3 363 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 UBE4BO95155 1302 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 F5H423 210 aaPredicted RBP9.18□□□□□ -0.94
CD47-204ENST00000471694 PDHXO00330 501 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 EFHC2Q5JST6 749 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 USP17L6PQ6QN14 398 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 PASD1Q8IV76 773 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 PDZD8Q8NEN9 1154 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 PUS7LQ9H0K6 701 aaKnown RBP9.18□□□□□ -0.94
CD47-204ENST00000471694 OSBPL5Q9H0X9 879 aaPredicted RBP9.18□□□□□ -0.94
CD47-204ENST00000471694 C6orf203Q9P0P8 240 aaPredicted RBP9.18□□□□□ -0.94
CD47-204ENST00000471694 TBKBP1A7MCY6 615 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 EGFRP00533 1210 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms