RNA–Protein interactions for RNA: ENST00000471477.1

COL15A1-203, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 2

Gene COL15A1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-203ENST00000471477 GPC3P51654 580 aa28.03■■■□□ 2.08
COL15A1-203ENST00000471477 KARSQ15046 597 aaKnown RBP28.03■■■□□ 2.08
COL15A1-203ENST00000471477 TCTN1Q2MV58 587 aa28.03■■■□□ 2.08
COL15A1-203ENST00000471477 PLEKHG4Q58EX7 1191 aa28.03■■■□□ 2.08
COL15A1-203ENST00000471477 CNKSR3Q6P9H4 555 aa28.03■■■□□ 2.08
COL15A1-203ENST00000471477 PADI6Q6TGC4 694 aa28.03■■■□□ 2.08
COL15A1-203ENST00000471477 RASSF8Q8NHQ8 419 aa28.03■■■□□ 2.08
COL15A1-203ENST00000471477 RHPN2Q8IUC4 686 aa28.02■■■□□ 2.08
COL15A1-203ENST00000471477 DBF4BQ8NFT6 615 aa28.02■■■□□ 2.08
COL15A1-203ENST00000471477 TCP11Q8WWU5 503 aa28.02■■■□□ 2.08
COL15A1-203ENST00000471477 RNPC3Q96LT9 517 aaKnown RBP28.02■■■□□ 2.08
COL15A1-203ENST00000471477 ADAMTS10Q9H324 1103 aa28.02■■■□□ 2.08
COL15A1-203ENST00000471477 TRIOBPQ9H2D6 2365 aa28.02■■■□□ 2.08
COL15A1-203ENST00000471477 ACTN1P12814 892 aa28.01■■■□□ 2.08
COL15A1-203ENST00000471477 PLCG1P19174 1290 aa28.01■■■□□ 2.08
COL15A1-203ENST00000471477 CRYBB1P53674 252 aaPredicted RBP28.01■■■□□ 2.08
COL15A1-203ENST00000471477 TSHZ1Q6ZSZ6 1077 aa28.01■■■□□ 2.08
COL15A1-203ENST00000471477 KSR1Q8IVT5 923 aa28.01■■■□□ 2.08
COL15A1-203ENST00000471477 KCTD17Q8N5Z5 321 aa28.01■■■□□ 2.08
COL15A1-203ENST00000471477 TMEM40Q8WWA1 233 aa28.01■■■□□ 2.08
COL15A1-203ENST00000471477 PSPC1Q8WXF1 523 aaKnown RBP28.01■■■□□ 2.08
COL15A1-203ENST00000471477 HERVK_113Q902F9 699 aa28.01■■■□□ 2.08
COL15A1-203ENST00000471477 SCLT1Q96NL6 688 aa28.01■■■□□ 2.08
COL15A1-203ENST00000471477 IFIH1Q9BYX4 1025 aaKnown RBP28.01■■■□□ 2.08
COL15A1-203ENST00000471477 AGO3Q9H9G7 860 aaKnown RBP28.01■■■□□ 2.08
COL15A1-203ENST00000471477 RCOR1Q9UKL0 485 aa28.01■■■□□ 2.08
COL15A1-203ENST00000471477 CUTAO60888 179 aa28.01■■■□□ 2.07
COL15A1-203ENST00000471477 TXLNAP40222 546 aa28.01■■■□□ 2.07
COL15A1-203ENST00000471477 MAEAQ7L5Y9 396 aa28.01■■■□□ 2.07
COL15A1-203ENST00000471477 ZNF710Q8N1W2 664 aa28.01■■■□□ 2.07
COL15A1-203ENST00000471477 LRRC15Q8TF66 581 aa28.01■■■□□ 2.07
COL15A1-203ENST00000471477 PRPF31Q8WWY3 499 aaKnown RBP28.01■■■□□ 2.07
COL15A1-203ENST00000471477 NLRP7Q8WX94 980 aa28.01■■■□□ 2.07
COL15A1-203ENST00000471477 SEPT8Q92599 483 aa28.01■■■□□ 2.07
COL15A1-203ENST00000471477 CIZ1Q9ULV3 898 aaPredicted RBP28.01■■■□□ 2.07
COL15A1-203ENST00000471477 COL4A3BPQ9Y5P4 624 aa28.01■■■□□ 2.07
COL15A1-203ENST00000471477 SQORQ9Y6N5 450 aa28.01■■■□□ 2.07
COL15A1-203ENST00000471477 LAMA3Q16787 3333 aa28■■■□□ 2.07
COL15A1-203ENST00000471477 CD52P31358 61 aa28■■■□□ 2.07
COL15A1-203ENST00000471477 ME1P48163 572 aa28■■■□□ 2.07
COL15A1-203ENST00000471477 USP38Q8NB14 1042 aa28■■■□□ 2.07
COL15A1-203ENST00000471477 MCPH1Q8NEM0 835 aa28■■■□□ 2.07
COL15A1-203ENST00000471477 LEO1Q8WVC0 666 aaPredicted RBP28■■■□□ 2.07
COL15A1-203ENST00000471477 NLRP4Q96MN2 994 aa28■■■□□ 2.07
COL15A1-203ENST00000471477 GPRC5CQ9NQ84 441 aa28■■■□□ 2.07
COL15A1-203ENST00000471477 CXXC1Q9P0U4 656 aaPredicted RBP28■■■□□ 2.07
COL15A1-203ENST00000471477 PCDHA7Q9UN72 937 aa28■■■□□ 2.07
COL15A1-203ENST00000471477 PTPRSQ13332 1948 aa28■■■□□ 2.07
COL15A1-203ENST00000471477 ZBBXA8MT70 800 aa27.99■■■□□ 2.07
COL15A1-203ENST00000471477 CYP11B2P19099 503 aa27.99■■■□□ 2.07
COL15A1-203ENST00000471477 CDC42EP1Q00587 391 aa27.99■■■□□ 2.07
COL15A1-203ENST00000471477 LAMTOR4Q0VGL1 99 aa27.99■■■□□ 2.07
COL15A1-203ENST00000471477 AXDND1Q5T1B0 1012 aaPredicted RBP27.99■■■□□ 2.07
COL15A1-203ENST00000471477 RASIP1Q5U651 963 aa27.99■■■□□ 2.07
COL15A1-203ENST00000471477 SPATA32Q96LK8 384 aa27.99■■■□□ 2.07
COL15A1-203ENST00000471477 POLR3FQ9H1D9 316 aaPredicted RBP27.99■■■□□ 2.07
COL15A1-203ENST00000471477 MTIF3Q9H2K0 278 aaKnown RBP27.99■■■□□ 2.07
COL15A1-203ENST00000471477 NOC2LQ9Y3T9 749 aaKnown RBP27.99■■■□□ 2.07
COL15A1-203ENST00000471477 MYH11P35749 1972 aa27.98■■■□□ 2.07
COL15A1-203ENST00000471477 A0A087WZ62 844 aa27.98■■■□□ 2.07
COL15A1-203ENST00000471477 SSBP05455 408 aaKnown RBP eCLIP27.98■■■□□ 2.07
COL15A1-203ENST00000471477 PAK2Q13177 524 aa27.98■■■□□ 2.07
COL15A1-203ENST00000471477 ZNF410Q86VK4 478 aa27.98■■■□□ 2.07
COL15A1-203ENST00000471477 APBB2Q92870 758 aa27.98■■■□□ 2.07
COL15A1-203ENST00000471477 FDXACB1Q9BRP7 624 aaPredicted RBP27.98■■■□□ 2.07
COL15A1-203ENST00000471477 BLOC1S4Q9NUP1 217 aa27.98■■■□□ 2.07
COL15A1-203ENST00000471477 CCDC39Q9UFE4 941 aa27.98■■■□□ 2.07
COL15A1-203ENST00000471477 LAMA2P24043 3122 aaKnown RBP27.97■■■□□ 2.07
COL15A1-203ENST00000471477 RPS6KA5O75582 802 aa27.97■■■□□ 2.07
COL15A1-203ENST00000471477 BAIAP3O94812 1187 aa27.97■■■□□ 2.07
COL15A1-203ENST00000471477 PLA2G4BP0C869 781 aa27.97■■■□□ 2.07
COL15A1-203ENST00000471477 ARL2P36404 184 aa27.97■■■□□ 2.07
COL15A1-203ENST00000471477 SLC12A3P55017 1021 aa27.97■■■□□ 2.07
COL15A1-203ENST00000471477 IKBKEQ14164 716 aa27.97■■■□□ 2.07
COL15A1-203ENST00000471477 FAM102BQ5T8I3 360 aa27.97■■■□□ 2.07
COL15A1-203ENST00000471477 SHC4Q6S5L8 630 aa27.97■■■□□ 2.07
COL15A1-203ENST00000471477 SYT2Q8N9I0 419 aaPredicted RBP27.97■■■□□ 2.07
COL15A1-203ENST00000471477 ASAP3Q8TDY4 903 aa27.97■■■□□ 2.07
COL15A1-203ENST00000471477 RUSC1Q9BVN2 902 aa27.97■■■□□ 2.07
COL15A1-203ENST00000471477 PADI3Q9ULW8 664 aa27.97■■■□□ 2.07
COL15A1-203ENST00000471477 ASAP2O43150 1006 aa27.96■■■□□ 2.07
COL15A1-203ENST00000471477 DARSP14868 501 aaKnown RBP27.96■■■□□ 2.07
COL15A1-203ENST00000471477 EIF4BP23588 611 aaKnown RBP27.96■■■□□ 2.07
COL15A1-203ENST00000471477 MXD4Q14582 209 aaPredicted RBP27.96■■■□□ 2.07
COL15A1-203ENST00000471477 RINT1Q6NUQ1 792 aa27.96■■■□□ 2.07
COL15A1-203ENST00000471477 FAM228AQ86W67 206 aa27.96■■■□□ 2.07
COL15A1-203ENST00000471477 RAD54LQ92698 747 aa27.96■■■□□ 2.07
COL15A1-203ENST00000471477 GCOM2Q9BZD3 368 aaPredicted RBP27.96■■■□□ 2.07
COL15A1-203ENST00000471477 ABHD14A-ACY1A0A1B0GW23 586 aa27.95■■■□□ 2.07
COL15A1-203ENST00000471477 SRGAP2CP0DJJ0 459 aa27.95■■■□□ 2.07
COL15A1-203ENST00000471477 GLRA2P23416 452 aa27.95■■■□□ 2.07
COL15A1-203ENST00000471477 NFX1Q12986 1120 aaKnown RBP27.95■■■□□ 2.07
COL15A1-203ENST00000471477 SCAND2PQ9GZW5 306 aaPredicted RBP27.95■■■□□ 2.07
COL15A1-203ENST00000471477 ERVK-5Q9HDB9 667 aa27.95■■■□□ 2.07
COL15A1-203ENST00000471477 GBF1Q92538 1859 aa27.94■■■□□ 2.06
COL15A1-203ENST00000471477 A0A087X0B3 334 aa27.94■■■□□ 2.06
COL15A1-203ENST00000471477 CSDE1O75534 798 aaKnown RBP27.94■■■□□ 2.06
COL15A1-203ENST00000471477 WDR5P61964 334 aaKnown RBP27.94■■■□□ 2.06
COL15A1-203ENST00000471477 MCM6Q14566 821 aa27.94■■■□□ 2.06
COL15A1-203ENST00000471477 LRIT3Q3SXY7 679 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms