RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 GRM6O15303 877 aa15.14■□□□□ 0.01
HMGN1-211ENST00000471260 HOXA2O43364 376 aa15.14■□□□□ 0.01
HMGN1-211ENST00000471260 MARCH6O60337 910 aa15.14■□□□□ 0.01
HMGN1-211ENST00000471260 BAG4O95429 457 aaKnown RBP15.14■□□□□ 0.01
HMGN1-211ENST00000471260 DARSP14868 501 aaKnown RBP15.14■□□□□ 0.01
HMGN1-211ENST00000471260 EPHA7Q15375 998 aa15.14■□□□□ 0.01
HMGN1-211ENST00000471260 MTERF2Q49AM1 385 aa15.14■□□□□ 0.01
HMGN1-211ENST00000471260 ZNF410Q86VK4 478 aa15.14■□□□□ 0.01
HMGN1-211ENST00000471260 NECAB1Q8N987 351 aa15.14■□□□□ 0.01
HMGN1-211ENST00000471260 HAS1Q92839 578 aa15.14■□□□□ 0.01
HMGN1-211ENST00000471260 TNFRSF25Q93038 417 aa15.14■□□□□ 0.01
HMGN1-211ENST00000471260 PABPC5Q96DU9 382 aaKnown RBP15.14■□□□□ 0.01
HMGN1-211ENST00000471260 PPP1R16BQ96T49 567 aa15.14■□□□□ 0.01
HMGN1-211ENST00000471260 INO80BQ9C086 356 aaPredicted RBP15.14■□□□□ 0.01
HMGN1-211ENST00000471260 ATP6V0A4Q9HBG4 840 aa15.14■□□□□ 0.01
HMGN1-211ENST00000471260 AAASQ9NRG9 546 aa15.14■□□□□ 0.01
HMGN1-211ENST00000471260 GJB4Q9NTQ9 266 aa15.14■□□□□ 0.01
HMGN1-211ENST00000471260 VAV3Q9UKW4 847 aa15.14■□□□□ 0.01
HMGN1-211ENST00000471260 REV3LO60673 3130 aa15.13■□□□□ 0.01
HMGN1-211ENST00000471260 DDX11L8A8MPP1 907 aa15.13■□□□□ 0.01
HMGN1-211ENST00000471260 EML1O00423 815 aa15.13■□□□□ 0.01
HMGN1-211ENST00000471260 MAFO75444 373 aaPredicted RBP15.13■□□□□ 0.01
HMGN1-211ENST00000471260 LARGE1O95461 756 aa15.13■□□□□ 0.01
HMGN1-211ENST00000471260 SEC24BO95487 1268 aa15.13■□□□□ 0.01
HMGN1-211ENST00000471260 TRIM29Q14134 588 aa15.13■□□□□ 0.01
HMGN1-211ENST00000471260 CSPP1Q1MSJ5 1256 aa15.13■□□□□ 0.01
HMGN1-211ENST00000471260 TCEAL5Q5H9L2 206 aa15.13■□□□□ 0.01
HMGN1-211ENST00000471260 ANO5Q75V66 913 aa15.13■□□□□ 0.01
HMGN1-211ENST00000471260 C4orf19Q8IY42 314 aa15.13■□□□□ 0.01
HMGN1-211ENST00000471260 NEK9Q8TD19 979 aa15.13■□□□□ 0.01
HMGN1-211ENST00000471260 NLRP7Q8WX94 980 aa15.13■□□□□ 0.01
HMGN1-211ENST00000471260 RSPH1Q8WYR4 309 aa15.13■□□□□ 0.01
HMGN1-211ENST00000471260 PPP2R3CQ969Q6 453 aa15.13■□□□□ 0.01
HMGN1-211ENST00000471260 GCOM2Q9BZD3 368 aaPredicted RBP15.13■□□□□ 0.01
HMGN1-211ENST00000471260 CHST12Q9NRB3 414 aa15.13■□□□□ 0.01
HMGN1-211ENST00000471260 DACT1Q9NYF0 836 aa15.13■□□□□ 0.01
HMGN1-211ENST00000471260 LIMCH1Q9UPQ0 1083 aa15.13■□□□□ 0.01
HMGN1-211ENST00000471260 PCDHB12Q9Y5F1 795 aa15.13■□□□□ 0.01
HMGN1-211ENST00000471260 TCF20Q9UGU0 1960 aaKnown RBP15.13■□□□□ 0.01
HMGN1-211ENST00000471260 KCNA5P22460 613 aa15.12■□□□□ 0.01
HMGN1-211ENST00000471260 UBE3AQ05086 875 aa15.12■□□□□ 0.01
HMGN1-211ENST00000471260 NR5A1Q13285 461 aa15.12■□□□□ 0.01
HMGN1-211ENST00000471260 GSE1Q14687 1217 aa15.12■□□□□ 0.01
HMGN1-211ENST00000471260 PAN2Q504Q3 1202 aaKnown RBP15.12■□□□□ 0.01
HMGN1-211ENST00000471260 EARS2Q5JPH6 523 aaKnown RBP15.12■□□□□ 0.01
HMGN1-211ENST00000471260 OTUD6AQ7L8S5 288 aa15.12■□□□□ 0.01
HMGN1-211ENST00000471260 SPPL3Q8TCT6 385 aa15.12■□□□□ 0.01
HMGN1-211ENST00000471260 SCLT1Q96NL6 688 aa15.12■□□□□ 0.01
HMGN1-211ENST00000471260 LLPHQ9BRT6 129 aaKnown RBP15.12■□□□□ 0.01
HMGN1-211ENST00000471260 CYP26B1Q9NR63 512 aa15.12■□□□□ 0.01
HMGN1-211ENST00000471260 A0A0U1RQF3 1178 aa15.11■□□□□ 0.01
HMGN1-211ENST00000471260 TBKBP1A7MCY6 615 aa15.11■□□□□ 0.01
HMGN1-211ENST00000471260 GAS2O43903 313 aaKnown RBP15.11■□□□□ 0.01
HMGN1-211ENST00000471260 EOMESO95936 686 aa15.11■□□□□ 0.01
HMGN1-211ENST00000471260 ITGB1P05556 798 aa15.11■□□□□ 0.01
HMGN1-211ENST00000471260 SFPQP23246 707 aaKnown RBP eCLIP15.11■□□□□ 0.01
HMGN1-211ENST00000471260 FAM102BQ5T8I3 360 aa15.11■□□□□ 0.01
HMGN1-211ENST00000471260 KLHL23Q8NBE8 558 aa15.11■□□□□ 0.01
HMGN1-211ENST00000471260 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.11■□□□□ 0.01
HMGN1-211ENST00000471260 SLC7A3Q8WY07 619 aa15.11■□□□□ 0.01
HMGN1-211ENST00000471260 TRAIPQ9BWF2 469 aa15.11■□□□□ 0.01
HMGN1-211ENST00000471260 TMEM117Q9H0C3 514 aa15.11■□□□□ 0.01
HMGN1-211ENST00000471260 ZSWIM4Q9H7M6 989 aa15.11■□□□□ 0.01
HMGN1-211ENST00000471260 ALG13Q9NP73 1137 aaKnown RBP15.11■□□□□ 0.01
HMGN1-211ENST00000471260 SUCLA2Q9P2R7 463 aaPredicted RBP15.11■□□□□ 0.01
HMGN1-211ENST00000471260 PCDHA12Q9UN75 941 aa15.11■□□□□ 0.01
HMGN1-211ENST00000471260 FAM50BQ9Y247 325 aa15.11■□□□□ 0.01
HMGN1-211ENST00000471260 BTBD18B2RXH4 712 aa15.1■□□□□ 0.01
HMGN1-211ENST00000471260 SKIP12755 728 aa15.1■□□□□ 0.01
HMGN1-211ENST00000471260 RFC5P40937 340 aa15.1■□□□□ 0.01
HMGN1-211ENST00000471260 RBM25P49756 843 aaKnown RBP15.1■□□□□ 0.01
HMGN1-211ENST00000471260 GATMP50440 423 aa15.1■□□□□ 0.01
HMGN1-211ENST00000471260 SPIRE1Q08AE8 756 aa15.1■□□□□ 0.01
HMGN1-211ENST00000471260 DRP2Q13474 957 aa15.1■□□□□ 0.01
HMGN1-211ENST00000471260 CAMK1Q14012 370 aa15.1■□□□□ 0.01
HMGN1-211ENST00000471260 SAFBQ15424 915 aaKnown RBP eCLIP15.1■□□□□ 0.01
HMGN1-211ENST00000471260 CTC1Q2NKJ3 1217 aa15.1■□□□□ 0.01
HMGN1-211ENST00000471260 SPOUT1Q5T280 376 aaKnown RBP15.1■□□□□ 0.01
HMGN1-211ENST00000471260 PDE12Q6L8Q7 609 aaKnown RBP15.1■□□□□ 0.01
HMGN1-211ENST00000471260 ECHDC2Q86YB7 292 aa15.1■□□□□ 0.01
HMGN1-211ENST00000471260 DIS3L2Q8IYB7 885 aaKnown RBP15.1■□□□□ 0.01
HMGN1-211ENST00000471260 POF1BQ8WVV4 589 aa15.1■□□□□ 0.01
HMGN1-211ENST00000471260 CEP170P1Q96L14 293 aa15.1■□□□□ 0.01
HMGN1-211ENST00000471260 ZSCAN31Q96LW9 406 aaPredicted RBP15.1■□□□□ 0.01
HMGN1-211ENST00000471260 LXNQ9BS40 222 aa15.1■□□□□ 0.01
HMGN1-211ENST00000471260 DHX33Q9H6R0 707 aaKnown RBP15.1■□□□□ 0.01
HMGN1-211ENST00000471260 TYW1Q9NV66 732 aaKnown RBP15.1■□□□□ 0.01
HMGN1-211ENST00000471260 MYO7AQ13402 2215 aa15.1■□□□□ 0.01
HMGN1-211ENST00000471260 FNDC1Q4ZHG4 1894 aaPredicted RBP15.1■□□□□ 0.01
HMGN1-211ENST00000471260 A0A087WZ62 844 aa15.09■□□□□ 0.01
HMGN1-211ENST00000471260 FSD2A1L4K1 749 aa15.09■□□□□ 0.01
HMGN1-211ENST00000471260 TMEM150BA6NC51 233 aa15.09■□□□□ 0.01
HMGN1-211ENST00000471260 GRXCR2A6NFK2 248 aa15.09■□□□□ 0.01
HMGN1-211ENST00000471260 ASAP2O43150 1006 aa15.09■□□□□ 0.01
HMGN1-211ENST00000471260 JAK2O60674 1132 aa15.09■□□□□ 0.01
HMGN1-211ENST00000471260 FGFR1P11362 822 aa15.09■□□□□ 0.01
HMGN1-211ENST00000471260 LAG3P18627 525 aa15.09■□□□□ 0.01
HMGN1-211ENST00000471260 YWHABP31946 246 aaKnown RBP15.09■□□□□ 0.01
HMGN1-211ENST00000471260 CALCRLQ16602 461 aa15.09■□□□□ 0.01
HMGN1-211ENST00000471260 PTCRAQ6ISU1 281 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms