RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 FOXRED1Q96CU9 486 aaPredicted RBP2.17□□□□□ -2.06
UBXN4-207ENST00000471246 DRC1Q96MC2 740 aa2.17□□□□□ -2.06
UBXN4-207ENST00000471246 OR14A2Q96R54 314 aa2.17□□□□□ -2.06
UBXN4-207ENST00000471246 FOXB1Q99853 325 aa2.17□□□□□ -2.06
UBXN4-207ENST00000471246 PCIF1Q9H4Z3 704 aa2.17□□□□□ -2.06
UBXN4-207ENST00000471246 UBA6A0AVT1 1052 aaPredicted RBP2.16□□□□□ -2.06
UBXN4-207ENST00000471246 PTPDC1A2A3K4 754 aa2.16□□□□□ -2.06
UBXN4-207ENST00000471246 H7C1D1 291 aa2.16□□□□□ -2.06
UBXN4-207ENST00000471246 INO80B-WBP1J3KQ70 363 aa2.16□□□□□ -2.06
UBXN4-207ENST00000471246 CBX4O00257 560 aa2.16□□□□□ -2.06
UBXN4-207ENST00000471246 RAD17O75943 681 aa2.16□□□□□ -2.06
UBXN4-207ENST00000471246 JMJD7P0C870 316 aa2.16□□□□□ -2.06
UBXN4-207ENST00000471246 CR2P20023 1033 aa2.16□□□□□ -2.06
UBXN4-207ENST00000471246 COMTP21964 271 aa2.16□□□□□ -2.06
UBXN4-207ENST00000471246 APEX1P27695 318 aaKnown RBP2.16□□□□□ -2.06
UBXN4-207ENST00000471246 RANGAP1P46060 587 aaPredicted RBP2.16□□□□□ -2.06
UBXN4-207ENST00000471246 RGS3P49796 1198 aa2.16□□□□□ -2.06
UBXN4-207ENST00000471246 MRPS21P82921 87 aaKnown RBP2.16□□□□□ -2.06
UBXN4-207ENST00000471246 SLC6A3Q01959 620 aa2.16□□□□□ -2.06
UBXN4-207ENST00000471246 ROM1Q03395 351 aa2.16□□□□□ -2.06
UBXN4-207ENST00000471246 MAP3K12Q12852 859 aa2.16□□□□□ -2.06
UBXN4-207ENST00000471246 DUSP8Q13202 625 aa2.16□□□□□ -2.06
UBXN4-207ENST00000471246 ARHGAP44Q17R89 818 aa2.16□□□□□ -2.06
UBXN4-207ENST00000471246 HS1BP3Q53T59 392 aa2.16□□□□□ -2.06
UBXN4-207ENST00000471246 ZNF362Q5T0B9 420 aaPredicted RBP2.16□□□□□ -2.06
UBXN4-207ENST00000471246 CREB3L3Q68CJ9 461 aa2.16□□□□□ -2.06
UBXN4-207ENST00000471246 TRIM68Q6AZZ1 485 aa2.16□□□□□ -2.06
UBXN4-207ENST00000471246 ESRP1Q6NXG1 681 aaKnown RBP2.16□□□□□ -2.06
UBXN4-207ENST00000471246 USP30Q70CQ3 517 aa2.16□□□□□ -2.06
UBXN4-207ENST00000471246 BCL6BQ8N143 479 aaPredicted RBP2.16□□□□□ -2.06
UBXN4-207ENST00000471246 KIAA1958Q8N8K9 716 aa2.16□□□□□ -2.06
UBXN4-207ENST00000471246 E2F7Q96AV8 911 aa2.16□□□□□ -2.06
UBXN4-207ENST00000471246 RNPC3Q96LT9 517 aaKnown RBP2.16□□□□□ -2.06
UBXN4-207ENST00000471246 ADOQ96SZ5 270 aa2.16□□□□□ -2.06
UBXN4-207ENST00000471246 PLA2G12BQ9BX93 195 aa2.16□□□□□ -2.06
UBXN4-207ENST00000471246 KRTAP1-5Q9BYS1 174 aa2.16□□□□□ -2.06
UBXN4-207ENST00000471246 KRTAP2-2Q9BYT5 123 aa2.16□□□□□ -2.06
UBXN4-207ENST00000471246 INO80BQ9C086 356 aaPredicted RBP2.16□□□□□ -2.06
UBXN4-207ENST00000471246 OR10A2Q9H208 303 aa2.16□□□□□ -2.06
UBXN4-207ENST00000471246 C12orf65Q9H3J6 166 aaKnown RBP2.16□□□□□ -2.06
UBXN4-207ENST00000471246 SEMA4AQ9H3S1 761 aa2.16□□□□□ -2.06
UBXN4-207ENST00000471246 CABP5Q9NP86 173 aa2.16□□□□□ -2.06
UBXN4-207ENST00000471246 MAGEC2Q9UBF1 373 aaPredicted RBP2.16□□□□□ -2.06
UBXN4-207ENST00000471246 B4GALT6Q9UBX8 382 aa2.16□□□□□ -2.06
UBXN4-207ENST00000471246 PUF60Q9UHX1 559 aaKnown RBP2.16□□□□□ -2.06
UBXN4-207ENST00000471246 FAM184BQ9ULE4 1060 aa2.16□□□□□ -2.06
UBXN4-207ENST00000471246 CD2APQ9Y5K6 639 aa2.16□□□□□ -2.06
UBXN4-207ENST00000471246 DMRT1Q9Y5R6 373 aa2.16□□□□□ -2.06
UBXN4-207ENST00000471246 SLC30A1Q9Y6M5 507 aa2.16□□□□□ -2.06
UBXN4-207ENST00000471246 TRAF5O00463 557 aa2.15□□□□□ -2.07
UBXN4-207ENST00000471246 SLC26A4O43511 780 aa2.15□□□□□ -2.07
UBXN4-207ENST00000471246 KPNA6O60684 536 aa2.15□□□□□ -2.07
UBXN4-207ENST00000471246 RFPL3O75679 317 aa2.15□□□□□ -2.07
UBXN4-207ENST00000471246 PTX3P26022 381 aaPredicted RBP2.15□□□□□ -2.07
UBXN4-207ENST00000471246 FLT3P36888 993 aa2.15□□□□□ -2.07
UBXN4-207ENST00000471246 RPS19P39019 145 aaKnown RBP2.15□□□□□ -2.07
UBXN4-207ENST00000471246 DGCR2P98153 550 aa2.15□□□□□ -2.07
UBXN4-207ENST00000471246 HGFACQ04756 655 aa2.15□□□□□ -2.07
UBXN4-207ENST00000471246 MYBPC3Q14896 1274 aa2.15□□□□□ -2.07
UBXN4-207ENST00000471246 EPHA7Q15375 998 aa2.15□□□□□ -2.07
UBXN4-207ENST00000471246 TCEA2Q15560 299 aa2.15□□□□□ -2.07
UBXN4-207ENST00000471246 ZNF174Q15697 407 aa2.15□□□□□ -2.07
UBXN4-207ENST00000471246 TKFCQ3LXA3 575 aa2.15□□□□□ -2.07
UBXN4-207ENST00000471246 EPHA10Q5JZY3 1008 aa2.15□□□□□ -2.07
UBXN4-207ENST00000471246 PRAMEF9Q5VWM5 478 aa2.15□□□□□ -2.07
UBXN4-207ENST00000471246 CDCA2Q69YH5 1023 aaPredicted RBP2.15□□□□□ -2.07
UBXN4-207ENST00000471246 SLFN12LQ6IEE8 588 aa2.15□□□□□ -2.07
UBXN4-207ENST00000471246 RNF207Q6ZRF8 634 aa2.15□□□□□ -2.07
UBXN4-207ENST00000471246 POLNQ7Z5Q5 900 aa2.15□□□□□ -2.07
UBXN4-207ENST00000471246 JAZF1Q86VZ6 243 aa2.15□□□□□ -2.07
UBXN4-207ENST00000471246 HOMER1Q86YM7 354 aa2.15□□□□□ -2.07
UBXN4-207ENST00000471246 SYNPOQ8N3V7 929 aa2.15□□□□□ -2.07
UBXN4-207ENST00000471246 C7orf31Q8N865 590 aa2.15□□□□□ -2.07
UBXN4-207ENST00000471246 MAML3Q96JK9 1138 aa2.15□□□□□ -2.07
UBXN4-207ENST00000471246 C16orf92Q96LL3 132 aa2.15□□□□□ -2.07
UBXN4-207ENST00000471246 MSL2Q9HCI7 577 aa2.15□□□□□ -2.07
UBXN4-207ENST00000471246 ACSS2Q9NR19 701 aa2.15□□□□□ -2.07
UBXN4-207ENST00000471246 INTS7Q9NVH2 962 aaKnown RBP2.15□□□□□ -2.07
UBXN4-207ENST00000471246 FANCLQ9NW38 375 aa2.15□□□□□ -2.07
UBXN4-207ENST00000471246 MAGEL2Q9UJ55 1249 aa2.15□□□□□ -2.07
UBXN4-207ENST00000471246 FAM83GA6ND36 823 aa2.14□□□□□ -2.07
UBXN4-207ENST00000471246 ZNF891A8MT65 544 aaPredicted RBP2.14□□□□□ -2.07
UBXN4-207ENST00000471246 CDC45O75419 566 aa2.14□□□□□ -2.07
UBXN4-207ENST00000471246 CYP17A1P05093 508 aa2.14□□□□□ -2.07
UBXN4-207ENST00000471246 SLC9A1P19634 815 aa2.14□□□□□ -2.07
UBXN4-207ENST00000471246 ACO1P21399 889 aaKnown RBP2.14□□□□□ -2.07
UBXN4-207ENST00000471246 MSX2P35548 267 aaPredicted RBP2.14□□□□□ -2.07
UBXN4-207ENST00000471246 STAT3P40763 770 aa2.14□□□□□ -2.07
UBXN4-207ENST00000471246 DSG1Q02413 1049 aa2.14□□□□□ -2.07
UBXN4-207ENST00000471246 ADAM15Q13444 863 aa2.14□□□□□ -2.07
UBXN4-207ENST00000471246 RIN1Q13671 783 aa2.14□□□□□ -2.07
UBXN4-207ENST00000471246 SAFB2Q14151 953 aaKnown RBP eCLIP2.14□□□□□ -2.07
UBXN4-207ENST00000471246 PRKD1Q15139 912 aaPredicted RBP2.14□□□□□ -2.07
UBXN4-207ENST00000471246 DGKDQ16760 1214 aa2.14□□□□□ -2.07
UBXN4-207ENST00000471246 C21orf62-AS1Q17RA5 79 aa2.14□□□□□ -2.07
UBXN4-207ENST00000471246 CFAP100Q494V2 611 aa2.14□□□□□ -2.07
UBXN4-207ENST00000471246 TTC38Q5R3I4 469 aa2.14□□□□□ -2.07
UBXN4-207ENST00000471246 KLHDC10Q6PID8 442 aa2.14□□□□□ -2.07
UBXN4-207ENST00000471246 C16orf86Q6ZW13 317 aa2.14□□□□□ -2.07
UBXN4-207ENST00000471246 UBE2R2Q712K3 238 aaPredicted RBP2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms