RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 MT-ND3P03897 115 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 CHGBP05060 677 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 SERPINB2P05120 415 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 JAK3P52333 1124 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 POLGP54098 1239 aaPredicted RBP11.31□□□□□ -0.6
RRP1B-202ENST00000470886 BIRC2Q13490 618 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 DNAJC24Q6P3W2 148 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 CASC4Q6P4E1 433 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 RNF207Q6ZRF8 634 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 DDX47Q9H0S4 455 aaKnown RBP11.31□□□□□ -0.6
RRP1B-202ENST00000470886 TMEM60Q9H2L4 133 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 FAM96AQ9H5X1 160 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 PPCSQ9HAB8 311 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 VCX3AQ9NNX9 186 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 AGPAT5Q9NUQ2 364 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 MCF2LO15068 1137 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 KRT1P04264 644 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 KRT19P08727 400 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 KIAA0825Q8IV33 1275 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 VGLL2Q8N8G2 317 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 MIPOL1Q8TD10 442 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 CCT8L2Q96SF2 557 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 FOXP3Q9BZS1 431 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 SCOCQ9UIL1 159 aa11.31□□□□□ -0.6
RRP1B-202ENST00000470886 FAM205CA6NFA0 338 aa11.3□□□□□ -0.6
RRP1B-202ENST00000470886 ARHGAP42A6NI28 874 aa11.3□□□□□ -0.6
RRP1B-202ENST00000470886 EYA4O95677 639 aa11.3□□□□□ -0.6
RRP1B-202ENST00000470886 SLCO1A2P46721 670 aa11.3□□□□□ -0.6
RRP1B-202ENST00000470886 TROAPQ12815 778 aa11.3□□□□□ -0.6
RRP1B-202ENST00000470886 E2F4Q16254 413 aa11.3□□□□□ -0.6
RRP1B-202ENST00000470886 TRMT10CQ7L0Y3 403 aaKnown RBP11.3□□□□□ -0.6
RRP1B-202ENST00000470886 ZMAT2Q96NC0 199 aaKnown RBP11.3□□□□□ -0.6
RRP1B-202ENST00000470886 TIPINQ9BVW5 301 aa11.3□□□□□ -0.6
RRP1B-202ENST00000470886 TUFT1Q9NNX1 390 aa11.3□□□□□ -0.6
RRP1B-202ENST00000470886 KCND2Q9NZV8 630 aa11.3□□□□□ -0.6
RRP1B-202ENST00000470886 PPIP5K2O43314 1243 aa11.3□□□□□ -0.6
RRP1B-202ENST00000470886 YWHAGP61981 247 aaKnown RBP eCLIP11.3□□□□□ -0.6
RRP1B-202ENST00000470886 SF3A3Q12874 501 aaKnown RBP eCLIP11.3□□□□□ -0.61e-7■■■□□ 16.1
RRP1B-202ENST00000470886 KDM7AQ6ZMT4 941 aa11.3□□□□□ -0.6
RRP1B-202ENST00000470886 TRIM72Q6ZMU5 477 aa11.3□□□□□ -0.6
RRP1B-202ENST00000470886 CCDC125Q86Z20 511 aa11.3□□□□□ -0.6
RRP1B-202ENST00000470886 PDIK1LQ8N165 341 aa11.3□□□□□ -0.6
RRP1B-202ENST00000470886 STK33Q9BYT3 514 aa11.3□□□□□ -0.6
RRP1B-202ENST00000470886 INTS2Q9H0H0 1204 aaKnown RBP11.3□□□□□ -0.6
RRP1B-202ENST00000470886 STXBP3O00186 592 aa11.3□□□□□ -0.6
RRP1B-202ENST00000470886 ERVK-24P63145 666 aa11.3□□□□□ -0.6
RRP1B-202ENST00000470886 STK4Q13043 487 aa11.3□□□□□ -0.6
RRP1B-202ENST00000470886 DRAP1Q14919 205 aaPredicted RBP11.3□□□□□ -0.6
RRP1B-202ENST00000470886 ATG16L1Q676U5 607 aa11.3□□□□□ -0.6
RRP1B-202ENST00000470886 CYP4F22Q6NT55 531 aa11.3□□□□□ -0.6
RRP1B-202ENST00000470886 TBC1D1Q86TI0 1168 aaPredicted RBP11.3□□□□□ -0.6
RRP1B-202ENST00000470886 CD209Q9NNX6 404 aa11.3□□□□□ -0.6
RRP1B-202ENST00000470886 HAUS2Q9NVX0 235 aa11.3□□□□□ -0.6
RRP1B-202ENST00000470886 HESX1Q9UBX0 185 aa11.3□□□□□ -0.6
RRP1B-202ENST00000470886 ZNF233A6NK53 670 aa11.29□□□□□ -0.6
RRP1B-202ENST00000470886 FAM107AO95990 144 aa11.29□□□□□ -0.6
RRP1B-202ENST00000470886 ADRA2BP18089 450 aa11.29□□□□□ -0.6
RRP1B-202ENST00000470886 CA4P22748 312 aa11.29□□□□□ -0.6
RRP1B-202ENST00000470886 SNX1Q13596 522 aa11.29□□□□□ -0.6
RRP1B-202ENST00000470886 TFDP1Q14186 410 aa11.29□□□□□ -0.6
RRP1B-202ENST00000470886 PNKPQ96T60 521 aa11.29□□□□□ -0.6
RRP1B-202ENST00000470886 BATF3Q9NR55 127 aa11.29□□□□□ -0.6
RRP1B-202ENST00000470886 CNTNAP4Q9C0A0 1308 aa11.29□□□□□ -0.6
RRP1B-202ENST00000470886 ESYT3A0FGR9 886 aa11.29□□□□□ -0.6
RRP1B-202ENST00000470886 POTEB3A0JP26 581 aa11.29□□□□□ -0.6
RRP1B-202ENST00000470886 POTECB2RU33 542 aa11.29□□□□□ -0.6
RRP1B-202ENST00000470886 ZRANB2O95218 330 aaKnown RBP eCLIP11.29□□□□□ -0.6
RRP1B-202ENST00000470886 LSP1P33241 339 aa11.29□□□□□ -0.6
RRP1B-202ENST00000470886 KLHL38Q2WGJ6 581 aa11.29□□□□□ -0.6
RRP1B-202ENST00000470886 POTEBQ6S5H4 581 aa11.29□□□□□ -0.6
RRP1B-202ENST00000470886 NIM1KQ8IY84 436 aa11.29□□□□□ -0.6
RRP1B-202ENST00000470886 USP38Q8NB14 1042 aa11.29□□□□□ -0.6
RRP1B-202ENST00000470886 MKNK1Q9BUB5 465 aa11.29□□□□□ -0.6
RRP1B-202ENST00000470886 NUF2Q9BZD4 464 aa11.29□□□□□ -0.6
RRP1B-202ENST00000470886 ROPN1BQ9BZX4 212 aaPredicted RBP11.29□□□□□ -0.6
RRP1B-202ENST00000470886 ROPN1Q9HAT0 212 aaPredicted RBP11.29□□□□□ -0.6
RRP1B-202ENST00000470886 TBC1D22BQ9NU19 505 aa11.29□□□□□ -0.6
RRP1B-202ENST00000470886 CNOT8Q9UFF9 292 aaKnown RBP11.29□□□□□ -0.6
RRP1B-202ENST00000470886 ZNF185O15231 689 aa11.29□□□□□ -0.6
RRP1B-202ENST00000470886 RPSAP08865 295 aaKnown RBP11.29□□□□□ -0.6
RRP1B-202ENST00000470886 TOB1P50616 345 aaPredicted RBP11.29□□□□□ -0.6
RRP1B-202ENST00000470886 KAZNQ674X7 775 aa11.29□□□□□ -0.6
RRP1B-202ENST00000470886 BARGINQ6ZT62 677 aa11.29□□□□□ -0.6
RRP1B-202ENST00000470886 SLC7A3Q8WY07 619 aa11.29□□□□□ -0.6
RRP1B-202ENST00000470886 SUCLA2Q9P2R7 463 aaPredicted RBP11.29□□□□□ -0.6
RRP1B-202ENST00000470886 MID2Q9UJV3 735 aa11.29□□□□□ -0.6
RRP1B-202ENST00000470886 TRPM3Q9HCF6 1732 aaPredicted RBP11.29□□□□□ -0.6
RRP1B-202ENST00000470886 HSPA9P38646 679 aaKnown RBP11.29□□□□□ -0.6
RRP1B-202ENST00000470886 SLC1A1P43005 524 aa11.29□□□□□ -0.6
RRP1B-202ENST00000470886 ASPHQ12797 758 aa11.29□□□□□ -0.6
RRP1B-202ENST00000470886 STAT4Q14765 748 aa11.29□□□□□ -0.6
RRP1B-202ENST00000470886 KIAA1755Q5JYT7 1200 aa11.29□□□□□ -0.6
RRP1B-202ENST00000470886 MIS18BP1Q6P0N0 1132 aa11.29□□□□□ -0.6
RRP1B-202ENST00000470886 PDCD7Q8N8D1 485 aaKnown RBP11.29□□□□□ -0.6
RRP1B-202ENST00000470886 CELF1Q92879 486 aaKnown RBP11.29□□□□□ -0.6
RRP1B-202ENST00000470886 SNF8Q96H20 258 aa11.29□□□□□ -0.6
RRP1B-202ENST00000470886 RNPC3Q96LT9 517 aaKnown RBP11.29□□□□□ -0.6
RRP1B-202ENST00000470886 STOML1Q9UBI4 398 aa11.29□□□□□ -0.6
RRP1B-202ENST00000470886 H7C0C1 242 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 TXNDC9O14530 226 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms