RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 FAM20AQ96MK3 541 aa35.22■■■■□ 3.23
HMG20B-209ENST00000470356 CSPG5O95196 566 aa35.21■■■■□ 3.23
HMG20B-209ENST00000470356 GCFC2P16383 781 aaKnown RBP35.21■■■■□ 3.23
HMG20B-209ENST00000470356 ZSCAN20P17040 1043 aaPredicted RBP35.21■■■■□ 3.23
HMG20B-209ENST00000470356 CDC42EP1Q00587 391 aa35.21■■■■□ 3.23
HMG20B-209ENST00000470356 MTERF2Q49AM1 385 aa35.21■■■■□ 3.23
HMG20B-209ENST00000470356 SPOUT1Q5T280 376 aaKnown RBP35.21■■■■□ 3.23
HMG20B-209ENST00000470356 ZNF668Q96K58 619 aaPredicted RBP35.21■■■■□ 3.23
HMG20B-209ENST00000470356 KCNMB3Q9NPA1 279 aa35.21■■■■□ 3.23
HMG20B-209ENST00000470356 GJB4Q9NTQ9 266 aa35.21■■■■□ 3.23
HMG20B-209ENST00000470356 IGKV6-21A0A0C4DH24 114 aa35.2■■■■□ 3.23
HMG20B-209ENST00000470356 FGFR1P11362 822 aa35.2■■■■□ 3.23
HMG20B-209ENST00000470356 KHSRPQ92945 711 aaKnown RBP eCLIP35.2■■■■□ 3.23
HMG20B-209ENST00000470356 SCLT1Q96NL6 688 aa35.2■■■■□ 3.23
HMG20B-209ENST00000470356 IGFLR1Q9H665 355 aa35.2■■■■□ 3.23
HMG20B-209ENST00000470356 TYW1Q9NV66 732 aaKnown RBP35.2■■■■□ 3.23
HMG20B-209ENST00000470356 ORC3Q9UBD5 711 aaPredicted RBP35.2■■■■□ 3.23
HMG20B-209ENST00000470356 TMEM150BA6NC51 233 aa35.19■■■■□ 3.22
HMG20B-209ENST00000470356 GTF2F1P35269 517 aaKnown RBP eCLIP35.19■■■■□ 3.22
HMG20B-209ENST00000470356 PSMC5P62195 406 aa35.19■■■■□ 3.22
HMG20B-209ENST00000470356 PPP2R5CQ13362 524 aa35.19■■■■□ 3.22
HMG20B-209ENST00000470356 ADAM15Q13444 863 aa35.19■■■■□ 3.22
HMG20B-209ENST00000470356 DRP2Q13474 957 aa35.19■■■■□ 3.22
HMG20B-209ENST00000470356 OXER1Q8TDS5 423 aa35.19■■■■□ 3.22
HMG20B-209ENST00000470356 NLRP7Q8WX94 980 aa35.19■■■■□ 3.22
HMG20B-209ENST00000470356 WASF1Q92558 559 aa35.19■■■■□ 3.22
HMG20B-209ENST00000470356 DDX11L8A8MPP1 907 aa35.18■■■■□ 3.22
HMG20B-209ENST00000470356 EML1O00423 815 aa35.18■■■■□ 3.22
HMG20B-209ENST00000470356 HOXA2O43364 376 aa35.18■■■■□ 3.22
HMG20B-209ENST00000470356 DTNBO60941 627 aa35.18■■■■□ 3.22
HMG20B-209ENST00000470356 IRS1P35568 1242 aa35.18■■■■□ 3.22
HMG20B-209ENST00000470356 DNM2P50570 870 aa35.18■■■■□ 3.22
HMG20B-209ENST00000470356 UBE3AQ05086 875 aa35.18■■■■□ 3.22
HMG20B-209ENST00000470356 DLX2Q07687 328 aaPredicted RBP35.18■■■■□ 3.22
HMG20B-209ENST00000470356 CSPP1Q1MSJ5 1256 aa35.18■■■■□ 3.22
HMG20B-209ENST00000470356 PIK3AP1Q6ZUJ8 805 aa35.18■■■■□ 3.22
HMG20B-209ENST00000470356 NAP1L4Q99733 375 aaKnown RBP35.18■■■■□ 3.22
HMG20B-209ENST00000470356 TMEM117Q9H0C3 514 aa35.18■■■■□ 3.22
HMG20B-209ENST00000470356 VAV3Q9UKW4 847 aa35.18■■■■□ 3.22
HMG20B-209ENST00000470356 ANO5Q75V66 913 aa35.17■■■■□ 3.22
HMG20B-209ENST00000470356 SH2D3AQ9BRG2 576 aa35.17■■■■□ 3.22
HMG20B-209ENST00000470356 CWH43Q9H720 699 aa35.17■■■■□ 3.22
HMG20B-209ENST00000470356 PRKAG3Q9UGI9 489 aa35.17■■■■□ 3.22
HMG20B-209ENST00000470356 TBX3O15119 743 aa35.16■■■■□ 3.22
HMG20B-209ENST00000470356 MAFO75444 373 aaPredicted RBP35.16■■■■□ 3.22
HMG20B-209ENST00000470356 SSTR3P32745 418 aaPredicted RBP35.16■■■■□ 3.22
HMG20B-209ENST00000470356 ECHDC2Q86YB7 292 aa35.16■■■■□ 3.22
HMG20B-209ENST00000470356 COLGALT1Q8NBJ5 622 aa35.16■■■■□ 3.22
HMG20B-209ENST00000470356 GCOM2Q9BZD3 368 aaPredicted RBP35.16■■■■□ 3.22
HMG20B-209ENST00000470356 RNF19AQ9NV58 838 aa35.16■■■■□ 3.22
HMG20B-209ENST00000470356 HCSTQ9UBK5 93 aa35.16■■■■□ 3.22
HMG20B-209ENST00000470356 PI4K2BG5E9Z4 385 aa35.15■■■■□ 3.22
HMG20B-209ENST00000470356 LINC01565O15544 149 aa35.15■■■■□ 3.22
HMG20B-209ENST00000470356 CCNT1O60563 726 aaKnown RBP35.15■■■■□ 3.22
HMG20B-209ENST00000470356 TBX10O75333 385 aa35.15■■■■□ 3.22
HMG20B-209ENST00000470356 FGF18O76093 207 aa35.15■■■■□ 3.22
HMG20B-209ENST00000470356 FDPSP14324 419 aaKnown RBP35.15■■■■□ 3.22
HMG20B-209ENST00000470356 QARSP47897 775 aaKnown RBP35.15■■■■□ 3.22
HMG20B-209ENST00000470356 ADGRD2Q7Z7M1 963 aa35.15■■■■□ 3.22
HMG20B-209ENST00000470356 CASD1Q96PB1 797 aa35.15■■■■□ 3.22
HMG20B-209ENST00000470356 A0A0U1RQF3 1178 aa35.14■■■■□ 3.22
HMG20B-209ENST00000470356 EIF5BO60841 1220 aaKnown RBP35.14■■■■□ 3.22
HMG20B-209ENST00000470356 LAG3P18627 525 aa35.14■■■■□ 3.22
HMG20B-209ENST00000470356 ME3Q16798 604 aa35.14■■■■□ 3.22
HMG20B-209ENST00000470356 EFHBQ8N7U6 833 aa35.14■■■■□ 3.22
HMG20B-209ENST00000470356 NECAB1Q8N987 351 aa35.14■■■■□ 3.22
HMG20B-209ENST00000470356 HAS1Q92839 578 aa35.14■■■■□ 3.22
HMG20B-209ENST00000470356 DACT1Q9NYF0 836 aa35.14■■■■□ 3.22
HMG20B-209ENST00000470356 SUCLA2Q9P2R7 463 aaPredicted RBP35.14■■■■□ 3.22
HMG20B-209ENST00000470356 DKC1O60832 514 aaKnown RBP eCLIP35.13■■■■□ 3.21
HMG20B-209ENST00000470356 FGFR4P22455 802 aa35.13■■■■□ 3.21
HMG20B-209ENST00000470356 LRRC55Q6ZSA7 311 aa35.13■■■■□ 3.21
HMG20B-209ENST00000470356 THNSL1Q8IYQ7 743 aa35.13■■■■□ 3.21
HMG20B-209ENST00000470356 GTF3C6Q969F1 213 aa35.13■■■■□ 3.21
HMG20B-209ENST00000470356 JPH2Q9BR39 696 aaPredicted RBP35.13■■■■□ 3.21
HMG20B-209ENST00000470356 CHST12Q9NRB3 414 aa35.13■■■■□ 3.21
HMG20B-209ENST00000470356 CSDE1O75534 798 aaKnown RBP35.12■■■■□ 3.21
HMG20B-209ENST00000470356 EOMESO95936 686 aa35.12■■■■□ 3.21
HMG20B-209ENST00000470356 P4HBP07237 508 aaKnown RBP35.12■■■■□ 3.21
HMG20B-209ENST00000470356 NRIP1P48552 1158 aa35.12■■■■□ 3.21
HMG20B-209ENST00000470356 ZP2Q05996 745 aa35.12■■■■□ 3.21
HMG20B-209ENST00000470356 SMAD2Q15796 467 aaKnown RBP35.12■■■■□ 3.21
HMG20B-209ENST00000470356 CLUL1Q15846 466 aa35.12■■■■□ 3.21
HMG20B-209ENST00000470356 EARS2Q5JPH6 523 aaKnown RBP35.12■■■■□ 3.21
HMG20B-209ENST00000470356 ZNF410Q86VK4 478 aa35.12■■■■□ 3.21
HMG20B-209ENST00000470356 ABI1Q8IZP0 508 aa35.12■■■■□ 3.21
HMG20B-209ENST00000470356 CYP26B1Q9NR63 512 aa35.12■■■■□ 3.21
HMG20B-209ENST00000470356 TLR9Q9NR96 1032 aa35.12■■■■□ 3.21
HMG20B-209ENST00000470356 A0A087WZ62 844 aa35.11■■■■□ 3.21
HMG20B-209ENST00000470356 PLA2G4FQ68DD2 849 aa35.11■■■■□ 3.21
HMG20B-209ENST00000470356 ZNF598Q86UK7 904 aaKnown RBP35.11■■■■□ 3.21
HMG20B-209ENST00000470356 ADHFE1Q8IWW8 467 aa35.11■■■■□ 3.21
HMG20B-209ENST00000470356 MICAL1Q8TDZ2 1067 aa35.11■■■■□ 3.21
HMG20B-209ENST00000470356 FDXACB1Q9BRP7 624 aaPredicted RBP35.11■■■■□ 3.21
HMG20B-209ENST00000470356 LRFN3Q9BTN0 628 aa35.11■■■■□ 3.21
HMG20B-209ENST00000470356 INO80BQ9C086 356 aaPredicted RBP35.11■■■■□ 3.21
HMG20B-209ENST00000470356 CD207Q9UJ71 328 aa35.11■■■■□ 3.21
HMG20B-209ENST00000470356 MBTPS2O43462 519 aa35.1■■■■□ 3.21
HMG20B-209ENST00000470356 MARCH6O60337 910 aa35.1■■■■□ 3.21
HMG20B-209ENST00000470356 LARGE1O95461 756 aa35.1■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms