RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 MRPS27Q92552 414 aaKnown RBP14.01□□□□□ -0.17
SPTLC1-204ENST00000469778 APBB2Q92870 758 aa14.01□□□□□ -0.17
SPTLC1-204ENST00000469778 IFT74Q96LB3 600 aa14.01□□□□□ -0.17
SPTLC1-204ENST00000469778 GCOM2Q9BZD3 368 aaPredicted RBP14.01□□□□□ -0.17
SPTLC1-204ENST00000469778 TNMDQ9H2S6 317 aa14.01□□□□□ -0.17
SPTLC1-204ENST00000469778 AKT3Q9Y243 479 aa14.01□□□□□ -0.17
SPTLC1-204ENST00000469778 HPSEQ9Y251 543 aa14.01□□□□□ -0.17
SPTLC1-204ENST00000469778 COL4A3BPQ9Y5P4 624 aa14.01□□□□□ -0.17
SPTLC1-204ENST00000469778 MKI67P46013 3256 aaKnown RBP14□□□□□ -0.17
SPTLC1-204ENST00000469778 LOXHD1Q8IVV2 1947 aa14□□□□□ -0.17
SPTLC1-204ENST00000469778 GOLGA6L22H0YM25 854 aa14□□□□□ -0.17
SPTLC1-204ENST00000469778 GPR182O15218 404 aa14□□□□□ -0.17
SPTLC1-204ENST00000469778 USO1O60763 962 aaKnown RBP14□□□□□ -0.17
SPTLC1-204ENST00000469778 GPR32O75388 356 aa14□□□□□ -0.17
SPTLC1-204ENST00000469778 SSBP05455 408 aaKnown RBP eCLIP14□□□□□ -0.17
SPTLC1-204ENST00000469778 SLFN14P0C7P3 912 aa14□□□□□ -0.17
SPTLC1-204ENST00000469778 EIF4BP23588 611 aaKnown RBP14□□□□□ -0.17
SPTLC1-204ENST00000469778 BMP8BP34820 402 aa14□□□□□ -0.17
SPTLC1-204ENST00000469778 SYKP43405 635 aa14□□□□□ -0.17
SPTLC1-204ENST00000469778 CLCN3P51790 818 aa14□□□□□ -0.17
SPTLC1-204ENST00000469778 NLRP11P59045 1033 aaKnown RBP14□□□□□ -0.17
SPTLC1-204ENST00000469778 MGAT3Q09327 533 aa14□□□□□ -0.17
SPTLC1-204ENST00000469778 LAMTOR4Q0VGL1 99 aa14□□□□□ -0.17
SPTLC1-204ENST00000469778 E2F4Q16254 413 aa14□□□□□ -0.17
SPTLC1-204ENST00000469778 NAALADL2Q58DX5 795 aa14□□□□□ -0.17
SPTLC1-204ENST00000469778 CNNM4Q6P4Q7 775 aa14□□□□□ -0.17
SPTLC1-204ENST00000469778 TRAF7Q6Q0C0 670 aa14□□□□□ -0.17
SPTLC1-204ENST00000469778 KCNK18Q7Z418 384 aa14□□□□□ -0.17
SPTLC1-204ENST00000469778 SRGAP1Q7Z6B7 1085 aa14□□□□□ -0.17
SPTLC1-204ENST00000469778 IFNLR1Q8IU57 520 aaPredicted RBP14□□□□□ -0.17
SPTLC1-204ENST00000469778 CEP57L1Q8IYX8 460 aa14□□□□□ -0.17
SPTLC1-204ENST00000469778 LRRC71Q8N4P6 559 aa14□□□□□ -0.17
SPTLC1-204ENST00000469778 WNT8BQ93098 351 aa14□□□□□ -0.17
SPTLC1-204ENST00000469778 TMEM143Q96AN5 459 aa14□□□□□ -0.17
SPTLC1-204ENST00000469778 SH2D3AQ9BRG2 576 aa14□□□□□ -0.17
SPTLC1-204ENST00000469778 NTPCRQ9BSD7 190 aaKnown RBP14□□□□□ -0.17
SPTLC1-204ENST00000469778 PPP1R12CQ9BZL4 782 aa14□□□□□ -0.17
SPTLC1-204ENST00000469778 WNT8AQ9H1J5 351 aa14□□□□□ -0.17
SPTLC1-204ENST00000469778 ADAMTS10Q9H324 1103 aa14□□□□□ -0.17
SPTLC1-204ENST00000469778 IL23AQ9NPF7 189 aa14□□□□□ -0.17
SPTLC1-204ENST00000469778 XPNPEP1Q9NQW7 623 aa14□□□□□ -0.17
SPTLC1-204ENST00000469778 KBTBD4Q9NVX7 518 aa14□□□□□ -0.17
SPTLC1-204ENST00000469778 RNF216Q9NWF9 866 aaPredicted RBP14□□□□□ -0.17
SPTLC1-204ENST00000469778 LARSQ9P2J5 1176 aaKnown RBP14□□□□□ -0.17
SPTLC1-204ENST00000469778 CDY2AQ9Y6F7 541 aa14□□□□□ -0.17
SPTLC1-204ENST00000469778 A0A087WWV3 80 aa13.99□□□□□ -0.17
SPTLC1-204ENST00000469778 H0YCG3 227 aa13.99□□□□□ -0.17
SPTLC1-204ENST00000469778 H0YGN5 161 aa13.99□□□□□ -0.17
SPTLC1-204ENST00000469778 POLR2DO15514 142 aaKnown RBP13.99□□□□□ -0.17
SPTLC1-204ENST00000469778 KRT18P05783 430 aaKnown RBP13.99□□□□□ -0.17
SPTLC1-204ENST00000469778 ACTN1P12814 892 aa13.99□□□□□ -0.17
SPTLC1-204ENST00000469778 PFKFB1P16118 471 aa13.99□□□□□ -0.17
SPTLC1-204ENST00000469778 NAMPTP43490 491 aa13.99□□□□□ -0.17
SPTLC1-204ENST00000469778 GPC3P51654 580 aa13.99□□□□□ -0.17
SPTLC1-204ENST00000469778 EFNA5P52803 228 aa13.99□□□□□ -0.17
SPTLC1-204ENST00000469778 SMTNP53814 917 aa13.99□□□□□ -0.17
SPTLC1-204ENST00000469778 UBE2HP62256 183 aa13.99□□□□□ -0.17
SPTLC1-204ENST00000469778 FAM102BQ5T8I3 360 aa13.99□□□□□ -0.17
SPTLC1-204ENST00000469778 PSRC1Q6PGN9 363 aaPredicted RBP13.99□□□□□ -0.17
SPTLC1-204ENST00000469778 TSHZ1Q6ZSZ6 1077 aa13.99□□□□□ -0.17
SPTLC1-204ENST00000469778 GPBP1Q86WP2 473 aa13.99□□□□□ -0.17
SPTLC1-204ENST00000469778 RHPN2Q8IUC4 686 aa13.99□□□□□ -0.17
SPTLC1-204ENST00000469778 SEPT8Q92599 483 aa13.99□□□□□ -0.17
SPTLC1-204ENST00000469778 BADQ92934 168 aa13.99□□□□□ -0.17
SPTLC1-204ENST00000469778 PLIN2Q99541 437 aa13.99□□□□□ -0.17
SPTLC1-204ENST00000469778 FTHL17Q9BXU8 183 aa13.99□□□□□ -0.17
SPTLC1-204ENST00000469778 PANK2Q9BZ23 570 aa13.99□□□□□ -0.17
SPTLC1-204ENST00000469778 C2orf40Q9H1Z8 148 aa13.99□□□□□ -0.17
SPTLC1-204ENST00000469778 MTIF3Q9H2K0 278 aaKnown RBP13.99□□□□□ -0.17
SPTLC1-204ENST00000469778 HOOK1Q9UJC3 728 aaKnown RBP13.99□□□□□ -0.17
SPTLC1-204ENST00000469778 ZMYND8Q9ULU4 1186 aaPredicted RBP13.99□□□□□ -0.17
SPTLC1-204ENST00000469778 A0A1B0GVL5 298 aa13.98□□□□□ -0.17
SPTLC1-204ENST00000469778 ABHD14A-ACY1A0A1B0GW23 586 aa13.98□□□□□ -0.17
SPTLC1-204ENST00000469778 BAIAP3O94812 1187 aa13.98□□□□□ -0.17
SPTLC1-204ENST00000469778 VTNP04004 478 aa13.98□□□□□ -0.17
SPTLC1-204ENST00000469778 DARSP14868 501 aaKnown RBP13.98□□□□□ -0.17
SPTLC1-204ENST00000469778 SYN1P17600 705 aa13.98□□□□□ -0.17
SPTLC1-204ENST00000469778 ITGB8P26012 769 aa13.98□□□□□ -0.17
SPTLC1-204ENST00000469778 PHKA2P46019 1235 aa13.98□□□□□ -0.17
SPTLC1-204ENST00000469778 CCL23P55773 120 aa13.98□□□□□ -0.17
SPTLC1-204ENST00000469778 NCBP1Q09161 790 aaKnown RBP13.98□□□□□ -0.17
SPTLC1-204ENST00000469778 MCM6Q14566 821 aa13.98□□□□□ -0.17
SPTLC1-204ENST00000469778 PLEKHG4Q58EX7 1191 aa13.98□□□□□ -0.17
SPTLC1-204ENST00000469778 ARSHQ5FYA8 562 aa13.98□□□□□ -0.17
SPTLC1-204ENST00000469778 FBXO47Q5MNV8 452 aa13.98□□□□□ -0.17
SPTLC1-204ENST00000469778 ELOA2Q8IYF1 753 aaPredicted RBP13.98□□□□□ -0.17
SPTLC1-204ENST00000469778 PDILTQ8N807 584 aa13.98□□□□□ -0.17
SPTLC1-204ENST00000469778 FSIP1Q8NA03 581 aa13.98□□□□□ -0.17
SPTLC1-204ENST00000469778 SPIRE2Q8WWL2 714 aa13.98□□□□□ -0.17
SPTLC1-204ENST00000469778 NLRP7Q8WX94 980 aa13.98□□□□□ -0.17
SPTLC1-204ENST00000469778 KCNN1Q92952 543 aa13.98□□□□□ -0.17
SPTLC1-204ENST00000469778 DHX58Q96C10 678 aa13.98□□□□□ -0.17
SPTLC1-204ENST00000469778 TIGD1Q96MW7 591 aa13.98□□□□□ -0.17
SPTLC1-204ENST00000469778 SCLT1Q96NL6 688 aa13.98□□□□□ -0.17
SPTLC1-204ENST00000469778 GDF15Q99988 308 aa13.98□□□□□ -0.17
SPTLC1-204ENST00000469778 POLR3FQ9H1D9 316 aaPredicted RBP13.98□□□□□ -0.17
SPTLC1-204ENST00000469778 GDPD2Q9HCC8 539 aa13.98□□□□□ -0.17
SPTLC1-204ENST00000469778 CHST12Q9NRB3 414 aa13.98□□□□□ -0.17
SPTLC1-204ENST00000469778 SEL1LQ9UBV2 794 aa13.98□□□□□ -0.17
SPTLC1-204ENST00000469778 TRIP12Q14669 1992 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms