RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 SNX12Q9UMY4 172 aa10.29□□□□□ -0.76
TOP3A-203ENST00000469739 KIF13BQ9NQT8 1826 aa10.29□□□□□ -0.76
TOP3A-203ENST00000469739 ERLIN1O75477 346 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 CALCAP01258 141 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 SERPING1P05155 500 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 CIITAP33076 1130 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 FIGNQ5HY92 759 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 PAPD7Q5XG87 772 aaKnown RBP10.28□□□□□ -0.76
TOP3A-203ENST00000469739 MCTP2Q6DN12 878 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 ZNF746Q6NUN9 644 aaPredicted RBP10.28□□□□□ -0.76
TOP3A-203ENST00000469739 FOXR1Q6PIV2 292 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 CREG2Q8IUH2 290 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 EHBP1Q8NDI1 1231 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 SLC35C1Q96A29 364 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 CEP63Q96MT8 703 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 RMDN3Q96TC7 470 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 RANBP17Q9H2T7 1088 aaKnown RBP10.28□□□□□ -0.76
TOP3A-203ENST00000469739 RPAP3Q9H6T3 665 aaPredicted RBP10.28□□□□□ -0.76
TOP3A-203ENST00000469739 RBM12Q9NTZ6 932 aaKnown RBP10.28□□□□□ -0.76
TOP3A-203ENST00000469739 DONSONQ9NYP3 566 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 HACL1Q9UJ83 578 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 ZNF536O15090 1300 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 SLC16A4O15374 487 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 GCLMP48507 274 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 USP14P54578 494 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 PEX3P56589 373 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 CORO7P57737 925 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 MRPS9P82933 396 aaKnown RBP10.28□□□□□ -0.76
TOP3A-203ENST00000469739 MKRN4PQ13434 485 aaPredicted RBP10.28□□□□□ -0.76
TOP3A-203ENST00000469739 MTMR1Q13613 665 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 SWT1Q5T5J6 900 aaKnown RBP10.28□□□□□ -0.76
TOP3A-203ENST00000469739 FAM102BQ5T8I3 360 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 HS2ST1Q7LGA3 356 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 GLYCTKQ8IVS8 523 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 CBWD1Q9BRT8 395 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 TLR10Q9BXR5 811 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 TYW1Q9NV66 732 aaKnown RBP10.28□□□□□ -0.76
TOP3A-203ENST00000469739 ZHX2Q9Y6X8 837 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 BRCA2P51587 3418 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 KCNK3O14649 394 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 TBX3O15119 743 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 BAG6P46379 1132 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 BRD3Q15059 726 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 DALRD3Q5D0E6 543 aaKnown RBP10.28□□□□□ -0.76
TOP3A-203ENST00000469739 KLHDC7AQ5VTJ3 777 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 IQCEQ6IPM2 695 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 PHLDB2Q86SQ0 1253 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 SPATA4Q8NEY3 305 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 SAAL1Q96ER3 474 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 WRNIP1Q96S55 665 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 POP1Q99575 1024 aaKnown RBP10.28□□□□□ -0.76
TOP3A-203ENST00000469739 AP1M1Q9BXS5 423 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 GANQ9H2C0 597 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 CNOT7Q9UIV1 285 aaKnown RBP10.28□□□□□ -0.76
TOP3A-203ENST00000469739 L1RE1Q9UN81 338 aa10.28□□□□□ -0.76
TOP3A-203ENST00000469739 PITPNM2Q9BZ72 1349 aa10.27□□□□□ -0.76
TOP3A-203ENST00000469739 VCAM1P19320 739 aa10.27□□□□□ -0.77
TOP3A-203ENST00000469739 GSCP56915 257 aaPredicted RBP10.27□□□□□ -0.77
TOP3A-203ENST00000469739 PRPF4BQ13523 1007 aaKnown RBP10.27□□□□□ -0.77
TOP3A-203ENST00000469739 BAATQ14032 418 aaPredicted RBP10.27□□□□□ -0.77
TOP3A-203ENST00000469739 COBLL1Q53SF7 1204 aa10.27□□□□□ -0.77
TOP3A-203ENST00000469739 ALKBH5Q6P6C2 394 aaKnown RBP10.27□□□□□ -0.77
TOP3A-203ENST00000469739 MMS22LQ6ZRQ5 1243 aa10.27□□□□□ -0.77
TOP3A-203ENST00000469739 SND1Q7KZF4 910 aaKnown RBP eCLIP10.27□□□□□ -0.77
TOP3A-203ENST00000469739 HDXQ7Z353 690 aa10.27□□□□□ -0.77
TOP3A-203ENST00000469739 PRPF38AQ8NAV1 312 aaKnown RBP10.27□□□□□ -0.77
TOP3A-203ENST00000469739 SLC5A5Q92911 643 aa10.27□□□□□ -0.77
TOP3A-203ENST00000469739 NACC1Q96RE7 527 aa10.27□□□□□ -0.77
TOP3A-203ENST00000469739 MXRA8Q9BRK3 442 aa10.27□□□□□ -0.77
TOP3A-203ENST00000469739 FRMD3A2A2Y4 597 aa10.27□□□□□ -0.77
TOP3A-203ENST00000469739 TMEM110-MUSTN1A8MSY1 372 aa10.27□□□□□ -0.77
TOP3A-203ENST00000469739 PDXKO00764 312 aa10.27□□□□□ -0.77
TOP3A-203ENST00000469739 GNA14O95837 355 aa10.27□□□□□ -0.77
TOP3A-203ENST00000469739 CYP3A4P08684 503 aa10.27□□□□□ -0.77
TOP3A-203ENST00000469739 RPL13P26373 211 aaKnown RBP10.27□□□□□ -0.77
TOP3A-203ENST00000469739 GUCY2FP51841 1108 aa10.27□□□□□ -0.77
TOP3A-203ENST00000469739 ASTE1Q2TB18 679 aaPredicted RBP10.27□□□□□ -0.77
TOP3A-203ENST00000469739 XKR9Q5GH70 373 aa10.27□□□□□ -0.77
TOP3A-203ENST00000469739 TTC19Q6DKK2 380 aaPredicted RBP10.27□□□□□ -0.77
TOP3A-203ENST00000469739 MOXD1Q6UVY6 613 aa10.27□□□□□ -0.77
TOP3A-203ENST00000469739 GBP6Q6ZN66 633 aa10.27□□□□□ -0.77
TOP3A-203ENST00000469739 EEPD1Q7L9B9 569 aa10.27□□□□□ -0.77
TOP3A-203ENST00000469739 PALB2Q86YC2 1186 aa10.27□□□□□ -0.77
TOP3A-203ENST00000469739 DAW1Q8N136 415 aa10.27□□□□□ -0.77
TOP3A-203ENST00000469739 MSANTD4Q8NCY6 345 aa10.27□□□□□ -0.77
TOP3A-203ENST00000469739 KAT5Q92993 513 aa10.27□□□□□ -0.77
TOP3A-203ENST00000469739 POLR3CQ9BUI4 534 aaPredicted RBP10.27□□□□□ -0.77
TOP3A-203ENST00000469739 GBP3Q9H0R5 595 aa10.27□□□□□ -0.77
TOP3A-203ENST00000469739 FEM1BQ9UK73 627 aa10.27□□□□□ -0.77
TOP3A-203ENST00000469739 COL2A1P02458 1487 aaPredicted RBP10.26□□□□□ -0.77
TOP3A-203ENST00000469739 ANKRD65E5RJM6 399 aa10.26□□□□□ -0.77
TOP3A-203ENST00000469739 NFKBIEO00221 500 aa10.26□□□□□ -0.77
TOP3A-203ENST00000469739 RPS6KA5O75582 802 aa10.26□□□□□ -0.77
TOP3A-203ENST00000469739 COPB2P35606 906 aa10.26□□□□□ -0.77
TOP3A-203ENST00000469739 R3HDM1Q15032 1099 aaKnown RBP10.26□□□□□ -0.77
TOP3A-203ENST00000469739 SLC18A3Q16572 532 aa10.26□□□□□ -0.77
TOP3A-203ENST00000469739 ANGEL2Q5VTE6 544 aaKnown RBP10.26□□□□□ -0.77
TOP3A-203ENST00000469739 ARHGEF16Q5VV41 709 aa10.26□□□□□ -0.77
TOP3A-203ENST00000469739 EPM2AIP1Q7L775 607 aaPredicted RBP10.26□□□□□ -0.77
TOP3A-203ENST00000469739 ZNF720Q7Z2F6 126 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms