RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 CLLU1OSQ5K130 101 aa20.73■□□□□ 0.91
TTC28-205ENST00000469670 CWF19L1Q69YN2 538 aaKnown RBP20.73■□□□□ 0.91
TTC28-205ENST00000469670 TYW1BQ6NUM6 668 aa20.73■□□□□ 0.91
TTC28-205ENST00000469670 KANK3Q6NY19 840 aa20.73■□□□□ 0.91
TTC28-205ENST00000469670 FANCBQ8NB91 859 aa20.73■□□□□ 0.91
TTC28-205ENST00000469670 BBXQ8WY36 941 aaPredicted RBP20.73■□□□□ 0.91
TTC28-205ENST00000469670 SLC12A7Q9Y666 1083 aa20.73■□□□□ 0.91
TTC28-205ENST00000469670 EOMESO95936 686 aa20.72■□□□□ 0.91
TTC28-205ENST00000469670 SREBF1P36956 1147 aa20.72■□□□□ 0.91
TTC28-205ENST00000469670 METAP2P50579 478 aaKnown RBP eCLIP20.72■□□□□ 0.91
TTC28-205ENST00000469670 CLCN3P51790 818 aa20.72■□□□□ 0.91
TTC28-205ENST00000469670 NLRP11P59045 1033 aaKnown RBP20.72■□□□□ 0.91
TTC28-205ENST00000469670 NIPA1Q7RTP0 329 aa20.72■□□□□ 0.91
TTC28-205ENST00000469670 TRMT1LQ7Z2T5 733 aaKnown RBP20.72■□□□□ 0.91
TTC28-205ENST00000469670 TEX2Q8IWB9 1127 aa20.72■□□□□ 0.91
TTC28-205ENST00000469670 CYP26B1Q9NR63 512 aa20.72■□□□□ 0.91
TTC28-205ENST00000469670 AKT3Q9Y243 479 aa20.72■□□□□ 0.91
TTC28-205ENST00000469670 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.71■□□□□ 0.91
TTC28-205ENST00000469670 NT5C1B-RDH14C9J2C7 533 aa20.71■□□□□ 0.91
TTC28-205ENST00000469670 DHX15O43143 795 aaKnown RBP20.71■□□□□ 0.91
TTC28-205ENST00000469670 EIF4BP23588 611 aaKnown RBP20.71■□□□□ 0.91
TTC28-205ENST00000469670 ALDH7A1P49419 539 aaKnown RBP20.71■□□□□ 0.91
TTC28-205ENST00000469670 ADCY7P51828 1080 aa20.71■□□□□ 0.91
TTC28-205ENST00000469670 COL9A3Q14050 684 aaPredicted RBP20.71■□□□□ 0.91
TTC28-205ENST00000469670 PPP1R18Q6NYC8 613 aa20.71■□□□□ 0.91
TTC28-205ENST00000469670 PLA2G4DQ86XP0 818 aa20.71■□□□□ 0.91
TTC28-205ENST00000469670 TMEM87AQ8NBN3 555 aa20.71■□□□□ 0.91
TTC28-205ENST00000469670 HELQQ8TDG4 1101 aa20.71■□□□□ 0.91
TTC28-205ENST00000469670 TMEM169Q96HH4 297 aa20.71■□□□□ 0.91
TTC28-205ENST00000469670 ADAMTS10Q9H324 1103 aa20.71■□□□□ 0.91
TTC28-205ENST00000469670 CEP131Q9UPN4 1083 aa20.71■□□□□ 0.91
TTC28-205ENST00000469670 MAFBQ9Y5Q3 323 aaPredicted RBP20.71■□□□□ 0.91
TTC28-205ENST00000469670 FAM86B1E9PN63 330 aa20.7■□□□□ 0.9
TTC28-205ENST00000469670 PI15O43692 258 aa20.7■□□□□ 0.9
TTC28-205ENST00000469670 FAM86B2P0C5J1 330 aa20.7■□□□□ 0.9
TTC28-205ENST00000469670 EPCAMP16422 314 aa20.7■□□□□ 0.9
TTC28-205ENST00000469670 AOC1P19801 751 aa20.7■□□□□ 0.9
TTC28-205ENST00000469670 BCAR1P56945 870 aa20.7■□□□□ 0.9
TTC28-205ENST00000469670 AP3B2Q13367 1082 aa20.7■□□□□ 0.9
TTC28-205ENST00000469670 MICU3Q86XE3 530 aa20.7■□□□□ 0.9
TTC28-205ENST00000469670 CCDC105Q8IYK2 499 aa20.7■□□□□ 0.9
TTC28-205ENST00000469670 VPS52Q8N1B4 723 aa20.7■□□□□ 0.9
TTC28-205ENST00000469670 AUTS2Q8WXX7 1259 aa20.7■□□□□ 0.9
TTC28-205ENST00000469670 MAP7D2Q96T17 732 aa20.7■□□□□ 0.9
TTC28-205ENST00000469670 MRPL9Q9BYD2 267 aaKnown RBP20.7■□□□□ 0.9
TTC28-205ENST00000469670 ZBP1Q9H171 429 aa20.7■□□□□ 0.9
TTC28-205ENST00000469670 GVINP1Q7Z2Y8 2422 aa20.7■□□□□ 0.9
TTC28-205ENST00000469670 A0A0U1RQF3 1178 aa20.69■□□□□ 0.9
TTC28-205ENST00000469670 IPO5O00410 1097 aaKnown RBP20.69■□□□□ 0.9
TTC28-205ENST00000469670 MAGEB2O15479 319 aa20.69■□□□□ 0.9
TTC28-205ENST00000469670 NPR3P17342 541 aa20.69■□□□□ 0.9
TTC28-205ENST00000469670 ANGPT1Q15389 498 aa20.69■□□□□ 0.9
TTC28-205ENST00000469670 EFCAB12Q6NXP0 572 aa20.69■□□□□ 0.9
TTC28-205ENST00000469670 ZNF598Q86UK7 904 aaKnown RBP20.69■□□□□ 0.9
TTC28-205ENST00000469670 LRRC2Q9BYS8 371 aa20.69■□□□□ 0.9
TTC28-205ENST00000469670 VPS13AQ96RL7 3174 aa20.69■□□□□ 0.9
TTC28-205ENST00000469670 MYO10Q9HD67 2058 aa20.69■□□□□ 0.9
TTC28-205ENST00000469670 CNTNAP5Q8WYK1 1306 aa20.69■□□□□ 0.9
TTC28-205ENST00000469670 DCHS1Q96JQ0 3298 aa20.68■□□□□ 0.9
TTC28-205ENST00000469670 SMCO2A6NFE2 343 aa20.68■□□□□ 0.9
TTC28-205ENST00000469670 TMOD1P28289 359 aa20.68■□□□□ 0.9
TTC28-205ENST00000469670 CLK2P49760 499 aaKnown RBP20.68■□□□□ 0.9
TTC28-205ENST00000469670 TDGQ13569 410 aa20.68■□□□□ 0.9
TTC28-205ENST00000469670 GIT2Q14161 759 aa20.68■□□□□ 0.9
TTC28-205ENST00000469670 ZNF746Q6NUN9 644 aaPredicted RBP20.68■□□□□ 0.9
TTC28-205ENST00000469670 TMC5Q6UXY8 1006 aa20.68■□□□□ 0.9
TTC28-205ENST00000469670 CABP7Q86V35 215 aa20.68■□□□□ 0.9
TTC28-205ENST00000469670 ZNF710Q8N1W2 664 aa20.68■□□□□ 0.9
TTC28-205ENST00000469670 LRRC71Q8N4P6 559 aa20.68■□□□□ 0.9
TTC28-205ENST00000469670 LINC01465Q8N7H1 131 aa20.68■□□□□ 0.9
TTC28-205ENST00000469670 FEZF2Q8TBJ5 459 aa20.68■□□□□ 0.9
TTC28-205ENST00000469670 SLC22A17Q8WUG5 538 aa20.68■□□□□ 0.9
TTC28-205ENST00000469670 ACSF2Q96CM8 615 aaPredicted RBP20.68■□□□□ 0.9
TTC28-205ENST00000469670 ZNF668Q96K58 619 aaPredicted RBP20.68■□□□□ 0.9
TTC28-205ENST00000469670 ZNF577Q9BSK1 485 aa20.68■□□□□ 0.9
TTC28-205ENST00000469670 IRAK3Q9Y616 596 aa20.68■□□□□ 0.9
TTC28-205ENST00000469670 IGLV3-22A0A075B6J6 115 aa20.67■□□□□ 0.9
TTC28-205ENST00000469670 PSAPP07602 524 aa20.67■□□□□ 0.9
TTC28-205ENST00000469670 CTSAP10619 480 aa20.67■□□□□ 0.9
TTC28-205ENST00000469670 OTOP3Q7RTS5 596 aa20.67■□□□□ 0.9
TTC28-205ENST00000469670 SGMS1Q86VZ5 419 aa20.67■□□□□ 0.9
TTC28-205ENST00000469670 TMEM173Q86WV6 379 aaPredicted RBP20.67■□□□□ 0.9
TTC28-205ENST00000469670 SMAP1Q8IYB5 467 aaPredicted RBP20.67■□□□□ 0.9
TTC28-205ENST00000469670 DTWD2Q8NBA8 298 aa20.67■□□□□ 0.9
TTC28-205ENST00000469670 RTP3Q9BQQ7 232 aa20.67■□□□□ 0.9
TTC28-205ENST00000469670 GLT8D2Q9H1C3 349 aa20.67■□□□□ 0.9
TTC28-205ENST00000469670 TBC1D22BQ9NU19 505 aa20.67■□□□□ 0.9
TTC28-205ENST00000469670 GABBR1Q9UBS5 961 aa20.67■□□□□ 0.9
TTC28-205ENST00000469670 ZC3H11AO75152 810 aaKnown RBP eCLIP20.66■□□□□ 0.9
TTC28-205ENST00000469670 DARSP14868 501 aaKnown RBP20.66■□□□□ 0.9
TTC28-205ENST00000469670 FGFR4P22455 802 aa20.66■□□□□ 0.9
TTC28-205ENST00000469670 GPC3P51654 580 aa20.66■□□□□ 0.9
TTC28-205ENST00000469670 POLGP54098 1239 aaPredicted RBP20.66■□□□□ 0.9
TTC28-205ENST00000469670 SYNE3Q6ZMZ3 975 aa20.66■□□□□ 0.9
TTC28-205ENST00000469670 CCDC149Q6ZUS6 474 aa20.66■□□□□ 0.9
TTC28-205ENST00000469670 GPR149Q86SP6 731 aa20.66■□□□□ 0.9
TTC28-205ENST00000469670 DDX53Q86TM3 631 aaKnown RBP20.66■□□□□ 0.9
TTC28-205ENST00000469670 EXOC6Q8TAG9 804 aa20.66■□□□□ 0.9
TTC28-205ENST00000469670 FAM167AQ96KS9 214 aa20.66■□□□□ 0.9
TTC28-205ENST00000469670 RBM28Q9NW13 759 aaKnown RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms